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8z9d Overview
![<div class='caption-body'>The deposited structure of PDB entry <span class='highlight'>8z9d</span> coloured by chain, front view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_deposited_chain_front_image-800x800.png "PDB entry 8z9d coloured by chain, front view.")
![<div class='caption-body'>The deposited structure of PDB entry <span class='highlight'>8z9d</span> coloured by chain, side view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_deposited_chain_side_image-800x800.png "PDB entry 8z9d coloured by chain, side view.")
![<div class='caption-body'>The deposited structure of PDB entry <span class='highlight'>8z9d</span> coloured by chain, top view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_deposited_chain_top_image-800x800.png "PDB entry 8z9d coloured by chain, top view.")
![<div class='caption-body'>The deposited structure of PDB entry <span class='highlight'>8z9d</span> coloured by chemically distinct molecules, front view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_deposited_chemically_distinct_molecules_front_image-800x800.png "PDB entry 8z9d coloured by chemically distinct molecules, front view.")
![<div class='caption-body'>The deposited structure of PDB entry <span class='highlight'>8z9d</span> coloured by chemically distinct molecules, side view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_deposited_chemically_distinct_molecules_side_image-800x800.png "PDB entry 8z9d coloured by chemically distinct molecules, side view.")
![<div class='caption-body'>The deposited structure of PDB entry <span class='highlight'>8z9d</span> coloured by chemically distinct molecules, top view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_deposited_chemically_distinct_molecules_top_image-800x800.png "PDB entry 8z9d coloured by chemically distinct molecules, top view.")
![<div class='caption-body'>Hetero 112-meric assembly 1 of PDB entry <span class='highlight'>8z9d</span> contains 14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>. Front view.</div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_entity_37_front_image-800x800.png "1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL in PDB entry 8z9d, assembly 1, front view.")
![<div class='caption-body'>Hetero 112-meric assembly 1 of PDB entry <span class='highlight'>8z9d</span> contains 14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>. Front view.</div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_entity_42_front_image-800x800.png "(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL in PDB entry 8z9d, assembly 1, front view.")
![<div class='caption-body'>Hetero 112-meric assembly 1 of PDB entry <span class='highlight'>8z9d</span> coloured by chemically distinct molecules, front view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_assembly_1_chemically_distinct_molecules_front_image-800x800.png "Hetero 112-meric assembly 1 of PDB entry 8z9d coloured by chemically distinct molecules, front view.")
![<div class='caption-body'>Hetero 112-meric assembly 1 of PDB entry <span class='highlight'>8z9d</span> coloured by chemically distinct molecules, side view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_assembly_1_chemically_distinct_molecules_side_image-800x800.png "Hetero 112-meric assembly 1 of PDB entry 8z9d coloured by chemically distinct molecules, side view.")
![<div class='caption-body'>Hetero 112-meric assembly 1 of PDB entry <span class='highlight'>8z9d</span> coloured by chemically distinct molecules, top view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II protein D1</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 1, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein T</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II 5 kDa protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center W protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center X protein, chloroplastic</span>;</li> <li class='image_legend_li'>12 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein Z</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein CP24, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 2, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Oxygen-evolving enhancer protein 3, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Chlorophyll a-b binding protein, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II 10 kDa polypeptide, chloroplastic</span>;</li> <li class='image_legend_li'>2 copies of <span class='highlight'>Photosystem II reaction center proteins PsbY, chloroplastic</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP43 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II D2 protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit alpha</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Cytochrome b559 subunit beta</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein H</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein I</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein J</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein K</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein L</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II reaction center protein M</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>Photosystem II CP47 reaction center protein</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CA-MN4-O5 CLUSTER</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>FE (II) ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>CHLORIDE ION</span>;</li> <li class='image_legend_li'>374 copies of <span class='highlight'>CHLOROPHYLL A</span>;</li> <li class='image_legend_li'>8 copies of <span class='highlight'>PHEOPHYTIN A</span>;</li> <li class='image_legend_li'>44 copies of <span class='highlight'>BETA-CAROTENE</span>;</li> <li class='image_legend_li'>6 copies of <span class='highlight'>2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE</span>;</li> <li class='image_legend_li'>55 copies of <span class='highlight'>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL</span>;</li> <li class='image_legend_li'>22 copies of <span class='highlight'>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</span>;</li> <li class='image_legend_li'>140 copies of <span class='highlight'>CHLOROPHYLL B</span>;</li> <li class='image_legend_li'>38 copies of <span class='highlight'>(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>18 copies of <span class='highlight'>(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL</span>;</li> <li class='image_legend_li'>14 copies of <span class='highlight'>(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>DODECYL-ALPHA-D-MALTOSIDE</span>;</li> <li class='image_legend_li'>20 copies of <span class='highlight'>DIGALACTOSYL DIACYL GLYCEROL (DGDG)</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>BICARBONATE ION</span>;</li> <li class='image_legend_li'>4 copies of <span class='highlight'>PROTOPORPHYRIN IX CONTAINING FE</span>.</li></ul></div>](https://www.ebi.ac.uk/pdbe/static/entry/8z9d_assembly_1_chemically_distinct_molecules_top_image-800x800.png "Hetero 112-meric assembly 1 of PDB entry 8z9d coloured by chemically distinct molecules, top view.")