› 8zvh

X-ray diffraction
1.87Å resolution

Crystal structure of AetD in complex with L-phenylalanine

Released:
DOI: 10.2210/pdb8zvh/pdb
PDB entry 8zvh coloured by chain, front view.
PDB entry 8zvh coloured by chain, side view.
PDB entry 8zvh coloured by chain, top view.
Source organism: Aetokthonos hydrillicola Thurmond2011
Primary publication:
Structural and molecular insights of two unique enzymes involved in the biosynthesis of a natural halogenated nitrile.
Chen CC, Li H, Huang JW, Guo RT
FEBS J (2024)
PMID: 39308083

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-235577 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Heme oxygenase Chains: A, B
Molecule details ›
Chains: A, B
Length: 250 amino acids
Theoretical weight: 28.71 KDa
Source organism: Aetokthonos hydrillicola Thurmond2011
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A861B387 (Residues: 1-239; Coverage: 100%)
Gene names: G7B40_000605, aetD

Ligands and Environments

3 bound ligands:
Ligand FE2 2 x FE2
Ligand PHE 2 x PHE
Ligand NI 5 x NI
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER METALJET
Spacegroup: P41
Unit cell:
a: 65.043Å b: 65.043Å c: 116.211Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.195 0.192 0.25
Expression system: Escherichia coli BL21(DE3)

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