› 9avk

X-ray diffraction
1.46Å resolution

Structure of long Rib domain from Limosilactobacillus reuteri

Released:
DOI: 10.2210/pdb9avk/pdb
PDB entry 9avk coloured by chain, front view.
PDB entry 9avk coloured by chain, side view.
PDB entry 9avk coloured by chain, top view.
Source organism: Limosilactobacillus reuteri
Primary publication:
Crystal structure of the long Rib domain of the LPXTG-anchored surface protein from Limosilactobacillus reuteri.
Xue Y, Wu Z, Kang X
Acta Crystallogr F Struct Biol Commun (2024)
PMID: 38699970

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-243946 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Gram-positive cocci surface proteins LPxTG domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 104 amino acids
Theoretical weight: 10.96 KDa
Source organism: Limosilactobacillus reuteri
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A2T5Q5G6 (Residues: 888-990; Coverage: 6%)
Gene name: DB325_02015
Sequence domains: Long Rib domain

Ligands and Environments

2 bound ligands:
Ligand NA 1 x NA
Ligand SCN 1 x SCN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER D8 QUEST
Spacegroup: P4122
Unit cell:
a: 36.161Å b: 36.161Å c: 126.332Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.155 0.154 0.183
Expression system: Escherichia coli BL21(DE3)

Quick links