9ayv

Electron Microscopy
4.4Å resolution

HIV CH505/BG505 SOSIP.v8.1 Env in Complex with V1/V3 Epitope and Anti-Immune Complex pAbs from Rabbit 2474

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero decamer (preferred)
PDBe Complex ID:
PDB-CPX-286394 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (9 distinct):
Rabbit Anti-Immune Complex pAb - Predicted Light Chain Chain: J
Molecule details ›
Chain: J
Length: 102 amino acids
Theoretical weight: 8.7 KDa
Source organism: Oryctolagus cuniculus
Envelope glycoprotein gp160 Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 155 amino acids
Theoretical weight: 17.45 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:
  • Canonical: A0A6H1VLP0 (Residues: 458-612; Coverage: 24%)
Gene name: env
Sequence domains: Retroviral envelope protein
Envelope glycoprotein gp160 Chains: A, C, N
Rabbit V1/V3 Epitope pAb - Predicted Light Chain Chains: G, H
Rabbit V1/V3 Epitope pAb - Predicted Heavy Chain Chain: E

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.4Å
Relevant EMDB volumes: EMD-43999
Expression system: Homo sapiens