› › Structure analysis

particulate methane monooxygenase in native membranes

Electron Microscopy
2.48Å resolution
PDB entry 9cl5 coloured by chain, front view.
PDB entry 9cl5 coloured by chain, side view.
PDB entry 9cl5 coloured by chain, top view.
Source organism: Methylocystis sp. ATCC 49242
Assembly composition:
hetero dodecamer (preferred)
Entry contents: 4 distinct polypeptide molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Multimeric state: hetero dodecamer
Accessible surface area: 85224.18 Å2
Buried surface area: 67673.39 Å2
Dissociation area: 2,590.4 Å2
Dissociation energy (ΔGdiss): 48.52 kcal/mol
Dissociation entropy (TΔSdiss): 27.54 kcal/mol
Symmetry number: 3
PDBe Complex ID: PDB-CPX-286376

Macromolecules

Methane monooxygenase/ammonia monooxygenase subunit A
Chains: Ba, Bb, Bc
Length: 244 amino acids
Theoretical weight: 27.8 KDa
Source organism: Methylocystis sp. ATCC 49242
UniProt:
  • Canonical: A0A5R8QJU8 (Residues: 9-252; Coverage: 97%)
Gene name: FEV16_06660
Pfam: Ammonia monooxygenase
Methane monooxygenase/ammonia monooxygenase subunit A in PDB entry 9cl5, assembly 1, front view.
Methane monooxygenase/ammonia monooxygenase subunit A in PDB entry 9cl5, assembly 1, side view.
Methane monooxygenase/ammonia monooxygenase subunit A in PDB entry 9cl5, assembly 1, top view.
PDBe-KB: UniProt Coverage View: A0A5R8QJU8  
124420406080100120140160180200220240
 
100200AVGPFNSVAEAAGCVQTVDWMLLVLLFFAVLGGYHVHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFCAASQAFWWVNFRLPFGAVFAALGLLIGEWINRYVNFWGWTYFPISLVFPSALIVPAIWLDVILLLSGSYVITAVVGSLGWGLLFYPNNWPAIAAFHQATEQHGQLMTLADLIGFHFVRTSMPEYIRMVERGTLRTFGKDVVPVAAFFSGFVSMMVYFLWWFMGRWYSTTKVIDTI
UniProt
A0A5R8QJU8
Chains
Interaction interfaces
Sequence conservation
Molecule details ›

Search similar proteins

Methane monooxygenase/ammonia monooxygenase subunit B
Chains: Aa, Ab, Ac
Length: 388 amino acids
Theoretical weight: 42.79 KDa
Source organism: Methylocystis sp. ATCC 49242
UniProt:
  • Canonical: A0A431PQN7 (Residues: 29-353, 355-415; Coverage: 99%)
Gene name: EKK29_10460
Pfam: Monooxygenase subunit B protein
Methane monooxygenase/ammonia monooxygenase subunit B in PDB entry 9cl5, assembly 1, front view.
Methane monooxygenase/ammonia monooxygenase subunit B in PDB entry 9cl5, assembly 1, side view.
Methane monooxygenase/ammonia monooxygenase subunit B in PDB entry 9cl5, assembly 1, top view.
PDBe-KB: UniProt Coverage View: A0A431PQN7  
138850100150200250300350
 
100200300HGEKSQQAFLRMRTLNWYDVQWSKTTVNVNEEMVLSGKVHVFSAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEIGKDYAFSINLRGRRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMKDFTDPVTLLDGSTVDLEHYGISRVYAWHLPWMAVGAAWIFFWFVRKGIITSYIRVAEGKADDVIGDDDRRIGAIVLALTILATIVGYAVTNSTFPRTIPLQAGLQKPLTPIETEGTVGVGKENVTTELNGGVYKVPGRELTINVKVKNNTSQPLRLGEYTAAGLRFLNPDVFTTKPDFPDYLLADRGLSVDATPIAPGEAKEIVVKIQDARWDIERLSDLAYDTDSQIGGLLFFFSPDGKRYASEIGGPVIPKFVA
UniProt
A0A431PQN7
Chains
Ligand binding sites
Interaction interfaces
Sequence conservation
Molecule details ›

Search similar proteins

Particulate methane monooxygenase subunit C
Chains: Ca, Cb, Cc
Length: 241 amino acids
Theoretical weight: 27.92 KDa
Source organism: Methylocystis sp. ATCC 49242
UniProt:
  • Canonical: W6D653 (Residues: 16-256; Coverage: 94%)
Gene name: pmoC
Pfam: Ammonia monooxygenase/methane monooxygenase, subunit C
Particulate methane monooxygenase subunit C in PDB entry 9cl5, assembly 1, front view.
Particulate methane monooxygenase subunit C in PDB entry 9cl5, assembly 1, side view.
Particulate methane monooxygenase subunit C in PDB entry 9cl5, assembly 1, top view.
PDBe-KB: UniProt Coverage View: W6D653  
124120406080100120140160180200220240
 
100200ESVVDLRGMWIGLVLLNVFYLIVRIYEQVFGWRAGLDSFAPEFQTYWMSILWTEIPLELVSGLGLAGYLWKTRDRNVDAVTPREEMRRLVVLVQWLVVYGIAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSVIAVGAFFYAKTRIPYFAHGYSLAFLIVAIGPFMIIPNVGLNEWGHTFWFMEELFVAPLHWGFVFFGWMALGVFGVVLQILMRIHALVGKEGVKLLTE
UniProt
W6D653
Chains
Ligand binding sites
Interaction interfaces
Sequence conservation
Molecule details ›

Search similar proteins

particulate methane monooxygenase supernumerary helix
Chains: Da, Db, Dc
Length: 23 amino acids
Theoretical weight: 2.43 KDa
Source organism: Methylocystis sp. ATCC 49242
UniProt:
  • Canonical: A0A9W6GV52 (Residues: 88-110; Coverage: 21%)
Gene name: LMG27198_26800
particulate methane monooxygenase supernumerary helix in PDB entry 9cl5, assembly 1, front view.
particulate methane monooxygenase supernumerary helix in PDB entry 9cl5, assembly 1, side view.
particulate methane monooxygenase supernumerary helix in PDB entry 9cl5, assembly 1, top view.
PDBe-KB: UniProt Coverage View: A0A9W6GV52  
123246810121416182022
 
1020MGWLVPAAMLAMVVIAAVTLTRL
UniProt
A0A9W6GV52
Chains
Interaction interfaces
Molecule details ›

Search similar proteins

Quick links