Function and Biology

Cryo-EM structure of SARS-CoV-2 spike protein Ecto-domain with internal tag, 1UP RBD conformation

Sequence families

Pfam Protein families (Pfam)
PF01601
Domain description: Coronavirus spike glycoprotein S2
Occurring in:
  1. Spike glycoprotein
The deposited structure of PDB entry 9css contains 3 copies of Pfam domain PF01601 (Coronavirus spike glycoprotein S2) in Spike glycoprotein. Showing 1 copy in chain B [auth C].

PF19209
Domain description: Coronavirus spike glycoprotein S1, C-terminal
Occurring in:
  1. Spike glycoprotein
The deposited structure of PDB entry 9css contains 3 copies of Pfam domain PF19209 (Coronavirus spike glycoprotein S1, C-terminal) in Spike glycoprotein. Showing 1 copy in chain B [auth C].

PF09408
Domain description: Betacoronavirus spike glycoprotein S1, receptor binding
Occurring in:
  1. Spike glycoprotein
The deposited structure of PDB entry 9css contains 3 copies of Pfam domain PF09408 (Betacoronavirus spike glycoprotein S1, receptor binding) in Spike glycoprotein. Showing 1 copy in chain B [auth C].

PF16451
Domain description: Betacoronavirus-like spike glycoprotein S1, N-terminal
Occurring in:
  1. Spike glycoprotein
The deposited structure of PDB entry 9css contains 3 copies of Pfam domain PF16451 (Betacoronavirus-like spike glycoprotein S1, N-terminal) in Spike glycoprotein. Showing 1 copy in chain B [auth C].