› 9e80

Electron Microscopy
1.81Å resolution

Canine parvovirus subtype 2a empty capsid in complex with Fab fragments of Mab 2C5

Released:
DOI: 10.2210/pdb9e80/pdb
PDB entry 9e80 coloured by chain, front view.
PDB entry 9e80 coloured by chain, side view.
PDB entry 9e80 coloured by chain, top view.
Source organism: Canine parvovirus 2a
Primary publication:
Structures and functions of the limited natural polyclonal antibody response to parvovirus infection.
Adu OF, Lee H, Früh SP, Schoenle MV, Weichert WS, Flyak AI, Hafenstein SL, Parrish CR
Proc Natl Acad Sci U S A 122 e2423460122 (2025)
PMID: 39951487
Related structures: EMD-47697

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo 60-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-284665 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein VP1 Chain: A
Molecule details ›
Chain: A
Length: 584 amino acids
Theoretical weight: 64.75 KDa
Source organism: Canine parvovirus 2a
Expression system: Felis catus
UniProt:
  • Canonical: Q03726 (Residues: 168-751; Coverage: 78%)
Gene name: VP-1
Sequence domains: Parvovirus coat protein VP2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 1.81Å
Relevant EMDB volumes: EMD-47697
Expression system: Felis catus

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