9fnz

Electron Microscopy
3.2Å resolution

PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure II)

Released:
Source organism: Pyrococcus furiosus
Related structures: EMD-50612

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 62-mer (preferred)
PDBe Complex ID:
PDB-CPX-284436 (preferred)
Entry contents:
29 distinct polypeptide molecules
1 distinct RNA molecule
Macromolecules (30 distinct):
Small zinc finger protein HVO-2753-like zinc-binding pocket domain-containing protein Chains: A1, B1
Molecule details ›
Chains: A1, B1
Length: 60 amino acids
Theoretical weight: 6.82 KDa
Source organism: Pyrococcus furiosus
UniProt:
  • Canonical: A0A5C0XRZ8 (Residues: 1-60; Coverage: 100%)
Gene name: PFDSM3638_09890
Sequence domains: Small zinc finger protein HVO_2753-like, Zn-binding pocket
Small ribosomal subunit protein eS32 Chains: A2, B2
Molecule details ›
Chains: A2, B2
Length: 37 amino acids
Theoretical weight: 5.02 KDa
Source organism: Pyrococcus furiosus
UniProt:
  • Canonical: Q8U232 (Residues: 1-37; Coverage: 100%)
Gene names: PF1018, rpl41e
Archaeal Ribosome Dimerizing Factor (aRDF) Chains: A3, A4, B3, B4
Large ribosomal subunit protein eL8 Chains: A5, B5
Small ribosomal subunit protein uS2 Chains: AB, BB
Small ribosomal subunit protein uS3 Chains: AC, BC
Small ribosomal subunit protein eS1 Chains: AD, BD
Small ribosomal subunit protein uS4 Chains: AE, BE
Small ribosomal subunit protein eS4 Chains: AF, BF
Small ribosomal subunit protein uS5 Chains: AG, BG
Small ribosomal subunit protein eS6 Chains: AH, BH
Small ribosomal subunit protein uS7 Chains: AI, BI
Small ribosomal subunit protein uS8 Chains: AJ, BJ
Small ribosomal subunit protein eS8 Chains: AK, BK
Small ribosomal subunit protein uS9 Chains: AL, BL
Small ribosomal subunit protein uS10 Chains: AM, BM
Small ribosomal subunit protein uS11 Chains: AN, BN
Small ribosomal subunit protein uS12 Chains: AO, BO
Small ribosomal subunit protein uS13 Chains: AP, BP
Small ribosomal subunit protein uS14 Chains: AQ, BQ
Small ribosomal subunit protein uS15 Chains: AR, BR
Small ribosomal subunit protein uS17 Chains: AS, BS
Small ribosomal subunit protein eS17 Chains: AT, BT
Small ribosomal subunit protein uS19 Chains: AU, BU
Small ribosomal subunit protein eS19 Chains: AV, BV
Small ribosomal subunit protein eS24 Chains: AW, BW
Small ribosomal subunit protein eS31 Chains: AX, BX
Small ribosomal subunit protein eS27 Chains: AY, BY
Small ribosomal subunit protein eS28 Chains: AZ, BZ
16S ribosomal RNA Chains: AA, BA

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.2Å
Relevant EMDB volumes: EMD-50612
Expression system: Escherichia coli