› 9j1l

Electron Microscopy
3.28Å resolution

Side fiber of monocin

Released:
DOI: 10.2210/pdb9j1l/pdb
PDB entry 9j1l coloured by chain, front view.
PDB entry 9j1l coloured by chain, side view.
PDB entry 9j1l coloured by chain, top view.
Source organism: Listeria monocytogenes
Primary publication:
Structure of an F-type phage tail-like bacteriocin from Listeria monocytogenes
Gu Z, Ge X, Wang J
Nat Commun 16 1695- (2025)
Related structures: EMD-61075

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero pentadecamer (preferred)
PDBe Complex ID:
PDB-CPX-283566 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
Alpha-amylase Chains: 1, N, n
Molecule details ›
Chains: 1, N, n
Length: 191 amino acids
Theoretical weight: 21.67 KDa
Source organism: Listeria monocytogenes
Expression system: Lactococcus lactis
UniProt:
  • Canonical: A0A3D7WJE9 (Residues: 1-191; Coverage: 100%)
Gene names: A3R20_11335, AF817_12260, AP104_04205, ARR48_10360, B4X68_12585, DG57_02060, DOV25_05000, DYZ50_02002, F1788_11040, FC284_08555, GCV64_11985, GI230_09860, GT011_12435, GYO01_10525, GYP27_04165, GYU24_12610, GZK27_10240
FtbP Chains: 2, A, B, C, I, P, Q, R, p
Molecule details ›
Chains: 2, A, B, C, I, P, Q, R, p
Length: 178 amino acids
Theoretical weight: 19.78 KDa
Source organism: Listeria monocytogenes
Expression system: Lactococcus lactis
UniProt:
  • Canonical: A0A3R0H0Z2 (Residues: 1-178; Coverage: 100%)
Gene names: A3R20_11345, AE233_00601, AF817_12270, AP104_04215, ARR48_10370, B4X68_12595, DG57_02070, DOV25_05010, DYZ50_02004, E1X78_08095, F1788_11050, FPL45_04495, GHO09_06960, GI230_09870, GT011_12445, GYO01_10535, GYP27_04175, GYU24_12620, GZK27_10250
FtbO Chains: 3, o
FtbO Chain: O

Ligands and Environments

1 bound ligand:
Ligand FE 2 x FE
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.28Å
Relevant EMDB volumes: EMD-61075
Expression system: Lactococcus lactis

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