Entries released this week  (1)

revised

(1)

Entry status  (1)

REL

(47)

Experimental methods  (2)

X-ray diffraction

(43)

Solution NMR

(4)

Authors  (214)

Bacher A

(9)

Fischer M

(8)

Huber R

(8)

Nar H

(8)

Auerbach G

(7)

Bracher A

(7)

Bader G

(6)

Amunts A

(5)

Nelson N

(5)

Borovikova A

(4)

Hoesl C

(4)

Hösl C

(4)

Kaiser J

(4)

Rebelo J

(4)

Schramek N

(4)

Toporik H

(4)

Borovikov A

(3)

Chartron JW

(3)

Clemons Jr WM

(3)

Clemons WM

(3)

Hakoshima T

(3)

Hatakeyama K

(3)

Kuramitsu S

(3)

Mack A

(3)

Maita N

(3)

Masui R

(3)

Meetei AR

(3)

Mochrie S

(3)

Nakagawa N

(3)

Okada K

(3)

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(3)

Rao M

(3)

Regan L

(3)

Sachpatzidis A

(3)

Saro D

(3)

Schlingman D

(3)

Singh TR

(3)

Sung P

(3)

Tanaka Y

(3)

Tsai MS

(3)

VanderVelde DG

(3)

Vandervelde DG

(3)

Xiong Y

(3)

Yokoyama S

(3)

Zhao Q

(3)

Zheng XF

(3)

Chu L

(2)

Fox III D

(2)

Garrido-Franco M

(2)

Gutlich M

(2)

Herrmann A

(2)

Jiang Y

(2)

Jin C

(2)

Joachimiak A

(2)

Lee DY

(2)

Li X

(2)

Ling C

(2)

Neukamm M

(2)

Niu L

(2)

Qi S

(2)

Richardson J

(2)

Sigler PB

(2)

Sprinzl M

(2)

Tao Y

(2)

Teng M

(2)

Tomchick DR

(2)

Weidong W

(2)

Yan Z

(2)

Yang W

(2)

Yao X

(2)

Yu H

(2)

Zhao Y

(2)

Anderson WF

(1)

Arrowsmith C

(1)

Arrowsmith CH

(1)

Bader A

(1)

Bange T

(1)

Berthet-Colominas C

(1)

Bezsonova I

(1)

Bone W

(1)

Brands M

(1)

Breit C

(1)

Briem H

(1)

CSGID

(1)

Center for Structural Genomics of Infectious Diseases (CSGID)

(1)

Chang JR

(1)

Cheeseman IM

(1)

Christie GE

(1)

Cleve A

(1)

Cusack S

(1)

Damle PK

(1)

Darst SA

(1)

Dearborn AD

(1)

Dhe-Paganon S

(1)

Dokland T

(1)

Drory O

(1)

Edwards A

(1)

Evdokimova E

(1)

Fares C

(1)

Fernandez-Montalvan A

(1)

 

More...

Homo / hetero assembly  (2)

homo

(28)

hetero

(19)

Assembly composition  (2)

protein structure

(28)

protein/protein complex

(19)

Assembly polymer count  (9)

decamer

(11)

dimer

(8)

tetramer

(8)

monomer

(7)

octadecamer

(4)

pentamer

(4)

icosamer

(3)

heptadecamer

(1)

trimer

(1)

Resolution distribution

1.0 - 1.5

(1)

1.5 - 2

(9)

2.0 - 2.5

(14)

2.5 - 3

(11)

3.0 - 3.5

(7)

3.5 - 4

(1)

Release year distribution

1995 - 2000

(8)

2000 - 2005

(12)

2005 - 2010

(12)

2010 - 2015

(20)

2015 - 2020

(3)

Journal  (18)

J Biol Chem

(8)

J Mol Biol

(7)

To be published

(6)

Nat Commun

(5)

Proc Natl Acad Sci U S A

(4)

J Biochem

(3)

Nature

(2)

Structure

(2)

Acta Crystallogr F Struct Biol Commun

(1)

Biochemistry

(1)

Cell

(1)

Clin Cancer Res

(1)

J Biomol NMR

(1)

Mol Cell

(1)

Nat Struct Biol

(1)

Nat Struct Mol Biol

(1)

Nucleic Acids Res

(1)

PLoS One

(1)

Organism superkingdom  (3)

Eukaryota

(25)

Bacteria

(21)

Viruses

(1)

Organism name  (18)

Homo sapiens

(13)

Escherichia coli

(9)

Spinacia oleracea

(4)

Thermus thermophilus

(4)

Hordeum vulgare

(3)

Rattus norvegicus

(3)

Escherichia coli K-12

(2)

Saccharomyces cerevisiae S288C

(2)

Aspergillus fumigatus Af293

(1)

Escherichia virus T4

(1)

Gallus gallus

(1)

Listeria monocytogenes

(1)

Nitrosomonas europaea

(1)

Paraburkholderia xenovorans LB400

(1)

Pisum sativum

(1)

Staphylococcus aureus

(1)

Thermus thermophilus HB8

(1)

Yersinia pestis CO92

(1)

Molecule name  (46)

GTP cyclohydrolase 1

(16)

GTP cyclohydrolase I

(16)

GTP-CH-I

(16)

CENP-X

(8)

Centromere protein X

(8)

FANCM-associated histone fold protein 2

(7)

FANCM-interacting histone fold protein 2

(7)

Fanconi anemia-associated polypeptide of 10 kDa

(7)

Retinoic acid-inducible gene D9 protein homolog

(7)

Stimulated by retinoic acid gene 13 protein homolog

(7)

PSI-G

(5)

Photosystem I 9 kDa protein

(5)

BUB1A

(4)

EF-Ts

(4)

Elongation factor Ts

(4)

Mitotic checkpoint serine/threonine-protein kinase BUB1

(4)

PSI-K

(4)

Photosystem I reaction center subunit V, chloroplastic

(4)

Photosystem I subunit X

(4)

hBUB1

(4)

Golgi to ER traffic protein 5

(3)

Light-harvesting complex I 7 kDa protein

(3)

Photosystem I reaction center subunit psaK, chloroplastic

(3)

Bacteriophage Q beta RNA-directed RNA polymerase subunit IV

(2)

Mating-deficient protein 2

(2)

Translation machinery-associated protein 24

(2)

Ubiquitin-like protein MDY2

(2)

Baseplate wedge protein gp11

(1)

Capsid morphogenesis B protein

(1)

D-xylose transporter

(1)

D-xylose-proton symporter

(1)

E6AP ubiquitin-protein ligase

(1)

Gene product 11

(1)

HECT-type ubiquitin transferase E3A

(1)

Haloacid dehalogenase-like hydrolase

(1)

Human papillomavirus E6-associated protein

(1)

Hypothetical mobile element-associated protein

(1)

Oncogenic protein-associated protein E6-AP

(1)

Photosystem I reaction center subunit V

(1)

Photosystem I reaction center subunit X psaK

(1)

Prokaryotic transcription elongation factor GreA/GreB

(1)

Regulator of nucleoside diphosphate kinase

(1)

Renal carcinoma antigen NY-REN-54

(1)

Ubiquitin-protein ligase E3A

(1)

Uncharacterized protein

(1)

gp11

(1)

Molecule type  (1)

Protein

(47)

Gene names  (51)

11

(1)

folE

(12)

CENPX

(8)

STRA13

(8)

FAAP10

(7)

JW2140

(7)

MHF2

(7)

b2153

(7)

PSAG

(5)

BUB1

(4)

BUB1L

(4)

tsf

(4)

Gch

(3)

Gch1

(3)

PSAK

(3)

TTHA1878

(3)

GET5

(2)

JW0165

(2)

MDY2

(2)

TMA24

(2)

TTHA0860

(2)

YOL111C

(2)

b0170

(2)

rnk

(2)

AFUA_5G01770

(1)

Bxe_B1342

(1)

DYT5

(1)

E6AP

(1)

EPVE6AP

(1)

GCH

(1)

GCH1

(1)

GF599_07060

(1)

GO941_04055

(1)

GQX37_02380

(1)

HPVE6A

(1)

JW0602

(1)

JW3991

(1)

LB359_15295

(1)

NCTC7878_00451

(1)

NE2130

(1)

SAMEA1531725_02707

(1)

SAMEA70153168_02109

(1)

UBE3A

(1)

YPO1505

(1)

YP_1395

(1)

b0610

(1)

b4031

(1)

get5

(1)

lmo1933

(1)

xylE

(1)

y2664

(1)

Interacting Molecules  (34)

Centromere protein S

(8)

Chlorophyll a-b binding protein P4, chloroplastic

(5)

Chlorophyll a-b binding protein, chloroplastic

(5)

Photosystem I P700 chlorophyll a apoprotein A1

(5)

Photosystem I P700 chlorophyll a apoprotein A2

(5)

Photosystem I iron-sulfur center

(5)

Photosystem I reaction center subunit II, chloroplastic

(5)

Photosystem I reaction center subunit III, chloroplastic

(5)

Photosystem I reaction center subunit IX

(5)

Photosystem I reaction center subunit VIII

(5)

Photosystem I-N subunit

(5)

Chlorophyll a-b binding protein 6, chloroplastic

(4)

Photosystem I reaction center subunit IV A, chloroplastic

(4)

Photosystem I reaction center subunit VI, chloroplastic

(4)

Photosystem I reaction center subunit XI, chloroplastic

(4)

GTP cyclohydrolase 1 feedback regulatory protein

(3)

PHOTOSYSTEM I-N SUBUNIT

(3)

Photosystem I reaction center subunit V, chloroplastic

(3)

Photosystem I reaction center subunit psaK, chloroplastic

(3)

Fanconi anemia group M protein

(2)

CHAIN R

(1)

Chlorophyll a-b binding protein 3, chloroplastic

(1)

Elongation factor Tu 1

(1)

Elongation factor Tu 2

(1)

Elongation factor Tu-A

(1)

PSI subunit V

(1)

PSI-K

(1)

Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic

(1)

Photosystem I reaction center subunit IV

(1)

Photosystem I reaction center subunit V

(1)

Photosystem I reaction center subunit VI

(1)

Photosystem I reaction center subunit psaK, chloroplast

(1)

RNA-directed RNA polymerase subunit beta

(1)

Small ribosomal subunit protein bS1

(1)

Interacting ligands  (23)

ZN : ZINC ION

(9)

GTP : GUANOSINE-5'-TRIPHOSPHATE

(6)

CLA : CHLOROPHYLL A

(4)

MG : MAGNESIUM ION

(4)

ADP : ADENOSINE-5'-DIPHOSPHATE

(3)

BCR : BETA-CAROTENE

(3)

CL : CHLORIDE ION

(3)

GOL : GLYCEROL

(3)

LMU : DODECYL-ALPHA-D-MALTOSIDE

(3)

PHE : PHENYLALANINE

(2)

SO4 : SULFATE ION

(2)

3PO : TRIPHOSPHATE

(1)

8DG : 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

(1)

8GT : 8-OXO-GUANOSINE-5'-TRIPHOSPHATE

(1)

CA : CALCIUM ION

(1)

CD : CADMIUM ION

(1)

CVQ : 2-[3,5-bis(fluoranyl)-4-[[3-[5-methoxy-4-[(3-methoxypyridin-4-yl)amino]pyrimidin-2-yl]indazol-1-yl]methyl]phenoxy]ethanol

(1)

HBI : 7,8-DIHYDROBIOPTERIN

(1)

IPA : ISOPROPYL ALCOHOL

(1)

LU : LUTETIUM (III) ION

(1)

PEG : DI(HYDROXYETHYL)ETHER

(1)

PO4 : PHOSPHATE ION

(1)

TRS : 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL

(1)

EC number / name  (3)

3.5.4.16 : GTP cyclohydrolase I

(16)

2.7.11.1 : Non-specific serine/threonine protein kinase

(4)

2.3.2.26 : HECT-type E3 ubiquitin transferase

(1)

Biological function  (26)

zinc ion binding

(17)

GTP cyclohydrolase I activity

(16)

GTP binding

(15)

hydrolase activity

(15)

metal ion binding

(15)

nucleotide binding

(15)

protein binding

(14)

DNA binding

(10)

catalytic activity

(10)

identical protein binding

(10)

double-stranded DNA binding

(7)

translation elongation factor activity

(5)

ATP binding

(4)

protein kinase activity

(4)

GTP-dependent protein binding

(3)

GTPase activity

(3)

calcium ion binding

(3)

mitogen-activated protein kinase binding

(3)

protein homodimerization activity

(3)

protein-containing complex binding

(3)

RNA polymerase binding

(2)

guanyl-nucleotide exchange factor activity

(2)

D-xylose:proton symporter activity

(1)

protein heterodimerization activity

(1)

symporter activity

(1)

transmembrane transporter activity

(1)

Biological process  (44)

tetrahydrofolate biosynthetic process

(16)

tetrahydrobiopterin biosynthetic process

(15)

biosynthetic process

(12)

one-carbon metabolic process

(12)

DNA damage response

(8)

DNA repair

(8)

cell division

(8)

kinetochore assembly

(8)

replication fork processing

(8)

resolution of meiotic recombination intermediates

(8)

chromosome segregation

(7)

interstrand cross-link repair

(7)

positive regulation of protein ubiquitination

(7)

tRNA queuosine(34) biosynthetic process

(7)

photosynthesis

(5)

translational elongation

(5)

mitotic spindle assembly checkpoint signaling

(4)

protein phosphorylation

(4)

dihydrobiopterin metabolic process

(3)

dopamine biosynthetic process

(3)

negative regulation of blood pressure

(3)

negative regulation of cardiac muscle cell apoptotic process

(3)

negative regulation of cellular senescence

(3)

neuromuscular process controlling posture

(3)

positive regulation of heart rate

(3)

positive regulation of neuron apoptotic process

(3)

positive regulation of telomere maintenance via telomerase

(3)

protein-containing complex assembly

(3)

pteridine-containing compound biosynthetic process

(3)

pteridine-containing compound metabolic process

(3)

regulation of blood pressure

(3)

regulation of lung blood pressure

(3)

regulation of removal of superoxide radicals

(3)

response to lipopolysaccharide

(3)

response to pain

(3)

response to tumor necrosis factor

(3)

response to type II interferon

(3)

translation

(3)

vasodilation

(3)

DNA-templated transcription elongation

(2)

regulation of DNA-templated transcription elongation

(2)

D-xylose transmembrane transport

(1)

transmembrane transport

(1)

viral tail assembly

(1)

Biological cell component  (26)

cytosol

(19)

cytoplasm

(18)

nucleus

(11)

protein-containing complex

(10)

FANCM-MHF complex

(8)

Fanconi anaemia nuclear complex

(8)

chromosome

(8)

chromosome, centromeric region

(8)

kinetochore

(8)

membrane

(8)

chromatin

(7)

inner kinetochore

(7)

nucleoplasm

(7)

chloroplast thylakoid membrane

(5)

photosystem I

(5)

chloroplast

(4)

plastid

(4)

thylakoid

(4)

cytoplasmic vesicle

(3)

intracellular protein-containing complex

(3)

mitochondrion

(3)

guanyl-nucleotide exchange factor complex

(2)

plasma membrane

(1)

virion component

(1)

virus tail

(1)

virus tail, baseplate

(1)

SCOP fold  (4)

T-fold

(14)

EF-Ts domain-like

(3)

RuvA C-terminal domain-like

(2)

Baseplate structural protein gp11

(1)

SCOP family  (4)

GTP cyclohydrolase I

(14)

Elongation factor Ts (EF-Ts), dimerisation domain

(3)

TS-N domain

(2)

Baseplate structural protein gp11

(1)

CATH class  (4)

Mainly Alpha

(45)

Alpha Beta

(24)

Special

(14)

Mainly Beta

(1)

CATH topology  (11)

GTP Cyclohydrolase I; Chain A, domain 1

(47)

GTP Cyclohydrolase I, domain 2

(16)

Single alpha-helices involved in coiled-coils or other helix-helix interfaces

(8)

Tetrahydropterin Synthase; Chain A

(4)

Transferase(Phosphotransferase); domain 1

(4)

Helicase, Ruva Protein; domain 3

(3)

Chitinase A; domain 3

(2)

Anthopleurin-A

(1)

Baseplate Structural Protein Gp11; Chain: A, domain 3

(1)

Growth Hormone; Chain: A;

(1)

Rossmann fold

(1)

Pfam accession / name  (14)

PF01227 : GTP_cyclohydroI

(16)

PF09415 : CENP-X

(8)

PF01241 : PSI_PSAK

(5)

PF00069 : Pkinase

(4)

PF00889 : EF_TS

(4)

PF01272 : GreA_GreB

(2)

PF14760 : Rnk_N

(2)

PF18514 : MDY2_C

(2)

PF00083 : Sugar_tr

(1)

PF00702 : Hydrolase

(1)

PF08677 : GP11

(1)

PF16558 : AZUL

(1)

PF16722 : SAPIS-gp6

(1)

PF17183 : Get5_C

(1)

Diffraction protocol  (2)

Single wavelength

(36)

MAD

(2)

Diffraction radiation source type  (2)

Synchrotron

(39)

Rotating anode

(3)

Diffraction source  (25)

APS BEAMLINE 19-ID

(4)

ESRF BEAMLINE ID23-2

(4)

MPG/DESY, HAMBURG BEAMLINE BW6

(4)

RIGAKU

(3)

SPRING-8 BEAMLINE BL41XU

(3)

APS BEAMLINE 23-ID-B

(2)

APS BEAMLINE 24-ID-E

(2)

NSLS BEAMLINE X25

(2)

SPRING-8 BEAMLINE BL45XU

(2)

SSRF BEAMLINE BL17U

(2)

APS BEAMLINE 24-ID-C

(1)

BESSY BEAMLINE 14.1

(1)

CHESS BEAMLINE F2

(1)

DIAMOND BEAMLINE I02

(1)

ESRF BEAMLINE ID09

(1)

NSLS BEAMLINE X9A

(1)

PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)

(1)

PHOTON FACTORY BEAMLINE BL-17A

(1)

SLS BEAMLINE X06SA

(1)

SLS BEAMLINE X10SA

(1)

SPRING-8 BEAMLINE BL38B1

(1)

SPRING-8 BEAMLINE BL44XU

(1)

SPRING-8 BEAMLINE BL45PX

(1)

SSRL BEAMLINE BL11-1

(1)

SSRL BEAMLINE BL12-2

(1)

Synchrotron site  (13)

APS

(9)

SPring-8

(7)

ESRF

(5)

MPG/DESY, HAMBURG

(4)

NSLS

(3)

SLS

(2)

SSRF

(2)

SSRL

(2)

BESSY

(1)

CHESS

(1)

Diamond

(1)

PETRA III, EMBL c/o DESY

(1)

Photon Factory

(1)

Diffraction detector type  (3)

CCD

(27)

Image plate

(10)

Pixel

(5)

Refinement software  (5)

CNS

(13)

PHENIX

(12)

REFMAC

(11)

X-PLOR

(6)

BUSTER

(1)

NMR software packages  (14)

TALOS

(4)

CNS

(3)

NMRPipe

(3)

TopSpin

(3)

ARIA

(2)

CYANA

(2)

CcpNmr Analysis

(2)

PINE

(2)

REDCAT

(2)

VnmrJ

(2)

FMC

(1)

NMRView

(1)

PROCHECK / PROCHECK-NMR

(1)

Sparky

(1)

NMR Field Strength

500.0 - 600

(3)

600.0 - 700

(4)

700.0 - 800

(1)

Representative Structures

100%

95%

90%

70%

50%

40%

30%