Entry status  (1)

REL

(156)

Experimental methods  (3)

X-ray diffraction

(140)

Electron Microscopy

(15)

Solution NMR

(1)

Authors  (355)

Steitz TA

(61)

Moore PB

(47)

Blaha G

(28)

Makabe K

(24)

Schmeing TM

(22)

Koide S

(21)

Gurel G

(18)

Gürel G

(18)

Schroeder SJ

(16)

Hansen JL

(14)

Terechko V

(14)

Yan S

(14)

Strobel SA

(13)

Ban N

(12)

Bashan A

(12)

Huang KS

(12)

Rozenberg H

(12)

Yonath A

(12)

Zimmerman E

(12)

Gawlak G

(11)

Tereshko V

(11)

Krupkin M

(10)

Matzov D

(10)

Kitchen DE

(9)

Koide A

(9)

Krojer T

(9)

Oppermann U

(9)

Phillips C

(9)

Vollmar M

(9)

von Delft F

(9)

Biancalana M

(8)

Brissett NC

(8)

Chowdhury R

(8)

Clifton IJ

(8)

Doherty AJ

(8)

Eyal Z

(8)

Fox GC

(8)

Ge W

(8)

Ho CH

(8)

Kavanagh KL

(8)

Kershaw NJ

(8)

McDonough MA

(8)

Muniz JRC

(8)

Ng SS

(8)

Pilka ES

(8)

Schofield CJ

(8)

Sekirnik R

(8)

Wekselman I

(8)

Connell SR

(7)

Fucini P

(7)

Tu D

(7)

Wilson DN

(7)

Ippolito JA

(6)

Miller D

(6)

Miller DJ

(6)

Nissen P

(6)

Nourse A

(6)

Regni CA

(6)

Roush RF

(6)

Schulman BA

(6)

Walsh CT

(6)

Boehringer D

(5)

Harms JM

(5)

Leibundgut M

(5)

Paukner S

(5)

Schluenzen F

(5)

Dunn JJ

(4)

Fujiwara H

(4)

Hansen J

(4)

Hilyard A

(4)

Hori Y

(4)

Jomaa A

(4)

Lawson CL

(4)

McElheny D

(4)

Spahn CM

(4)

Spahn CMT

(4)

Stachelhaus T

(4)

Tao Y

(4)

Wu M

(4)

Zaborowska Z

(4)

Zang J

(4)

Chen JM

(3)

Fokine A

(3)

Fujiwara W

(3)

Granskog K

(3)

Han S

(3)

Hang T

(3)

Huband MD

(3)

Kanyo ZF

(3)

Ma X

(3)

Magee TV

(3)

Maguire BA

(3)

Marr ES

(3)

McCurdy SP

(3)

Nguyen TT

(3)

Pilka E

(3)

Rao VB

(3)

Rossmann MG

(3)

Shanmugasundaram V

(3)

Subashi TA

(3)

 

More...

Homo / hetero assembly  (2)

hetero

(115)

homo

(41)

Assembly composition  (4)

RNA/protein complex

(99)

protein structure

(41)

protein/protein complex

(14)

DNA/RNA hybrid/RNA/protein complex

(2)

Assembly polymer count  (18)

31-mer

(38)

monomer

(28)

30-mer

(19)

32-mer

(19)

tetramer

(12)

28-mer

(7)

dimer

(7)

33-mer

(5)

35-mer

(4)

octamer

(4)

36-mer

(3)

trimer

(3)

undecamer

(2)

1560-mer

(1)

26-mer

(1)

27-mer

(1)

29-mer

(1)

37-mer

(1)

Resolution distribution

1.0 - 1.5

(8)

1.5 - 2

(19)

2.0 - 2.5

(28)

2.5 - 3

(54)

3.0 - 3.5

(30)

3.5 - 4

(16)

Release year distribution

1995 - 2000

(3)

2000 - 2005

(42)

2005 - 2010

(80)

2010 - 2015

(34)

2015 - 2020

(33)

Journal  (28)

J Mol Biol

(33)

Proc Natl Acad Sci U S A

(20)

Mol Cell

(18)

Nature

(12)

EMBO J

(9)

Cell

(7)

J Am Chem Soc

(6)

Nucleic Acids Res

(6)

Bioorg Med Chem Lett

(4)

Nat Commun

(4)

Protein Sci

(4)

RNA

(4)

Acta Crystallogr D Biol Crystallogr

(3)

Antimicrob Agents Chemother

(3)

Proteins

(3)

To be published

(3)

J Biol Chem

(2)

Nat Struct Mol Biol

(2)

Sci Rep

(2)

Structure

(2)

Acta Crystallogr Sect F Struct Biol Cryst Commun

(1)

Angew Chem Int Ed Engl

(1)

Cell Rep

(1)

Chem Sci

(1)

J Med Chem

(1)

J Mol Liq

(1)

Nat Struct Biol

(1)

Protein Cell

(1)

Organism superkingdom  (4)

Bacteria

(67)

Archaea

(65)

Eukaryota

(21)

Viruses

(3)

Organism name  (18)

Haloarcula marismortui

(65)

Borreliella burgdorferi

(24)

Homo sapiens

(14)

Deinococcus radiodurans

(12)

Escherichia coli

(12)

Staphylococcus aureus subsp. aureus NCTC 8325

(6)

Borreliella burgdorferi B31

(4)

Deinococcus radiodurans R1

(4)

Spinacia oleracea

(4)

Dictyostelium discoideum

(2)

Escherichia phage RB69

(2)

Escherichia coli K-12

(1)

Escherichia virus T4

(1)

Geobacillus stearothermophilus

(1)

Mycobacterium tuberculosis

(1)

Neisseria gonorrhoeae FA 1090

(1)

Saccharomyces cerevisiae S288C

(1)

uncultured Prochloron sp. 06037A

(1)

Molecule name  (40)

Large ribosomal subunit protein uL6

(98)

50S ribosomal protein L6

(95)

Hl10

(65)

Hmal6

(65)

Outer surface protein A

(23)

ROX

(13)

60S ribosomal protein L8 histidine hydroxylase

(10)

Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66

(10)

Myc-associated protein with JmjC domain

(10)

Nucleolar protein 66

(10)

Ribosomal oxygenase 1

(10)

Ribosomal oxygenase NO66

(10)

hsNO66

(10)

MccB protein

(7)

THIF-type NAD/FAD binding fold domain-containing protein

(7)

50S ribosomal protein L6, chloroplastic

(4)

Large ribosomal subunit protein uL6c

(4)

60S ribosomal protein L27a histidine hydroxylase

(3)

60S ribosomal protein L9

(3)

Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA

(3)

Histone lysine demethylase MINA

(3)

MYC-induced nuclear antigen

(3)

Mineral dust-induced gene protein

(3)

Nucleolar protein 52

(3)

Outer Surface Protein A

(3)

Ribosomal oxygenase 2

(3)

Ribosomal oxygenase MINA

(3)

Small outer capsid protein

(3)

Soc

(3)

Outer surface protein B

(2)

60S ribosomal protein L9-A

(1)

BL10

(1)

L8

(1)

Large ribosomal subunit protein uL6A

(1)

Putative regulatory protein

(1)

RP24

(1)

TruD

(1)

Uncharacterized protein

(1)

YL11

(1)

YcaO domain-containing protein

(1)

Molecule type  (1)

Protein

(156)

Gene names  (38)

rpl6

(65)

rrnAC1596

(65)

rplF

(30)

ospA

(23)

BB_A15

(19)

DR_2111

(16)

C14orf169

(10)

MAPJD

(10)

NO66

(10)

RIOX1

(10)

mccB

(7)

JW3267

(6)

SAOUHSC_02496

(6)

b3305

(6)

RPL6

(4)

SOVF_107200

(4)

MDIG

(3)

MINA

(3)

MINA53

(3)

NO52

(3)

RIOX2

(3)

BB_A16

(2)

DDB_G0278959

(2)

RPL9

(2)

ospB

(2)

rpl9

(2)

MTCY210.38

(1)

NGO_1945

(1)

OK/SW-cl.103

(1)

RPL8A

(1)

RPL9A

(1)

RPL9P7

(1)

RPL9P8

(1)

RPL9P9

(1)

Rv0719

(1)

YGL147C

(1)

soc

(1)

truD

(1)

Interacting Molecules  (183)

Large ribosomal subunit protein uL2

(98)

5S ribosomal RNA

(97)

Large ribosomal subunit protein uL3

(97)

23S ribosomal RNA

(96)

Large ribosomal subunit protein uL14

(96)

Large ribosomal subunit protein uL15

(95)

Large ribosomal subunit protein uL13

(94)

Large ribosomal subunit protein uL16

(94)

Large ribosomal subunit protein uL18

(94)

Large ribosomal subunit protein uL22

(94)

Large ribosomal subunit protein uL23

(94)

Large ribosomal subunit protein uL24

(94)

Large ribosomal subunit protein uL29

(94)

Large ribosomal subunit protein uL30

(94)

Large ribosomal subunit protein uL4

(94)

Large ribosomal subunit protein uL5

(94)

Large ribosomal subunit protein uL10

(73)

Large ribosomal subunit protein eL24

(67)

Large ribosomal subunit protein eL32

(66)

Large ribosomal subunit protein eL18

(65)

Large ribosomal subunit protein eL19

(65)

Large ribosomal subunit protein eL21

(65)

Large ribosomal subunit protein eL31

(65)

Large ribosomal subunit protein eL37

(65)

Large ribosomal subunit protein eL39

(65)

Large ribosomal subunit protein eL42

(65)

Large ribosomal subunit protein eL8

(65)

Large ribosomal subunit protein uL11

(65)

Large ribosomal subunit protein eL15

(64)

Large ribosomal subunit protein eL43

(64)

Large ribosomal subunit protein bL17

(29)

Large ribosomal subunit protein bL19

(29)

Large ribosomal subunit protein bL20

(29)

Large ribosomal subunit protein bL21

(29)

Large ribosomal subunit protein bL25

(29)

Large ribosomal subunit protein bL27

(29)

Large ribosomal subunit protein bL32

(29)

Large ribosomal subunit protein bL34

(29)

Large ribosomal subunit protein bL35

(29)

Large ribosomal subunit protein bL28

(27)

Large ribosomal subunit protein bL33

(22)

Large ribosomal subunit protein bL36

(15)

Large ribosomal subunit protein bL9

(7)

Large ribosomal subunit protein bL36A

(6)

Large ribosomal subunit protein bL17c

(4)

Large ribosomal subunit protein bL19c

(4)

Large ribosomal subunit protein bL20c

(4)

Large ribosomal subunit protein bL21c

(4)

Large ribosomal subunit protein bL27c

(4)

Large ribosomal subunit protein bL28c

(4)

Large ribosomal subunit protein bL32c

(4)

Large ribosomal subunit protein bL33c

(4)

Large ribosomal subunit protein bL34c

(4)

Large ribosomal subunit protein bL35c

(4)

Large ribosomal subunit protein bL36c

(4)

Large ribosomal subunit protein bL9c

(4)

Large ribosomal subunit protein cL37 alpha

(4)

Large ribosomal subunit protein cL38

(4)

Large ribosomal subunit protein uL13c

(4)

Large ribosomal subunit protein uL14c

(4)

Large ribosomal subunit protein uL15c

(4)

Large ribosomal subunit protein uL16c

(4)

Large ribosomal subunit protein uL18c

(4)

Large ribosomal subunit protein uL22c

(4)

Large ribosomal subunit protein uL23c

(4)

Large ribosomal subunit protein uL24c

(4)

Large ribosomal subunit protein uL29c

(4)

Large ribosomal subunit protein uL2cz/uL2cy

(4)

Large ribosomal subunit protein uL3c

(4)

Large ribosomal subunit protein uL4c

(4)

Large ribosomal subunit protein uL5c

(4)

Alkaline phosphatase

(3)

Eukaryotic translation initiation factor 6

(3)

Large ribosomal subunit protein bL12

(3)

Large ribosomal subunit protein bL31c

(3)

Signal recognition particle protein

(3)

tRNA CCAend

(3)

26S RIBOSOMAL RNA

(2)

5'-R(*CP*CP*(DA)*(PHE)*(ACA))-3'

(2)

5'-R(*CP*CP*AP*(PHE)*(ACA))-3'

(2)

5'-R(*CP*CP*AP*(PHE)*(ACA)*(BTN))-3'

(2)

CCA

(2)

Immunoglobulin heavy constant gamma 2B

(2)

Immunoglobulin kappa constant

(2)

Large ribosomal subunit protein eL40

(2)

Large ribosomal subunit protein uL1

(2)

Microcin C7 ANALOG

(2)

Microcin C7 analog

(2)

RNA (5'-R(*CP*CP*(8AN))-3')

(2)

Ribosome maturation protein SBDS

(2)

SRP 4.5S RNA

(2)

23S rRNA methylase leader peptide

(1)

23S ribosomal RNA, chloroplastic

(1)

25S ribosomal RNA

(1)

4.5S ribosomal RNA

(1)

4.8S rRNA

(1)

4.8S ribosomal RNA, chloroplastic

(1)

5'-D(*(DC)P*(DC)P*(5AA)P*(2OP)P*(PO2)P*AP*C*C)-3')

(1)

5'-R(*(DC)P*(DC)P*(PPU)*(LOF)P*(PO2)P*AP*C*C)-3'

(1)

5'-R(*CP*(5AA)*(HFA))-3'

(1)

 

More...

Interacting ligands  (22)

CL : CHLORIDE ION

(66)

PG4 : TETRAETHYLENE GLYCOL

(8)

ZN : ZINC ION

(8)

EDO : 1,2-ETHANEDIOL

(7)

OGA : N-OXALYLGLYCINE

(7)

SO4 : SULFATE ION

(7)

MN : MANGANESE (II) ION

(6)

NI : NICKEL (II) ION

(6)

IMD : IMIDAZOLE

(4)

MG : MAGNESIUM ION

(4)

ACT : ACETATE ION

(3)

AKG : 2-OXOGLUTARIC ACID

(2)

GOL : GLYCEROL

(2)

APC : DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER

(1)

ATP : ADENOSINE-5'-TRIPHOSPHATE

(1)

CD : CADMIUM ION

(1)

FE : FE (III) ION

(1)

ND7 : 5'-O-[(S)-amino(hydroxy)phosphoryl]adenosine

(1)

PD2 : PYRIDINE-2,4-DICARBOXYLIC ACID

(1)

PEG : DI(HYDROXYETHYL)ETHER

(1)

POP : PYROPHOSPHATE 2-

(1)

TRS : 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL

(1)

EC number / name  (1)

1.14.11.27 : [Histone H3]-dimethyl-L-lysine(36) demethylase

(10)

Biological function  (19)

rRNA binding

(103)

structural constituent of ribosome

(103)

RNA binding

(97)

metal ion binding

(11)

protein binding

(10)

ATP binding

(7)

nucleotide binding

(7)

nucleotidyltransferase activity

(7)

thiosulfate-cyanide sulfurtransferase activity

(7)

ubiquitin-like modifier activating enzyme activity

(7)

large ribosomal subunit rRNA binding

(6)

dioxygenase activity

(3)

histone H3K36 demethylase activity

(3)

histone H3K4 demethylase activity

(3)

histone demethylase activity

(3)

identical protein binding

(3)

oxidoreductase activity

(3)

peptidyl-histidine dioxygenase activity

(3)

transcription corepressor activity

(3)

Biological process  (7)

translation

(103)

cytoplasmic translation

(98)

response to antibiotic

(6)

ribosomal large subunit assembly

(6)

chromatin remodeling

(3)

negative regulation of DNA-templated transcription

(3)

ribosome biogenesis

(3)

Biological cell component  (21)

ribosome

(103)

ribonucleoprotein complex

(100)

cytosolic large ribosomal subunit

(98)

cell outer membrane

(28)

cell surface

(15)

membrane

(15)

cytoplasm

(14)

cytosol

(10)

nucleolus

(3)

nucleoplasm

(3)

nucleus

(3)

transcription regulator complex

(3)

viral capsid

(3)

viral capsid, decoration

(3)

virion component

(3)

chloroplast

(2)

extracellular matrix

(2)

phagocytic vesicle

(2)

plastid

(2)

peptidoglycan-based cell wall

(1)

plasma membrane

(1)

SCOP fold  (3)

Ribosomal protein L6

(46)

open-sided beta-meander

(4)

Ribosome and ribosomal fragments

(1)

SCOP family  (3)

Ribosomal protein L6

(46)

Outer surface protein

(4)

Large subunit

(1)

CATH class  (3)

Alpha Beta

(156)

Mainly Beta

(39)

Mainly Alpha

(14)

CATH topology  (9)

Outer Surface Protein A; domain 3

(156)

Lipocalin

(26)

Arc Repressor Mutant, subunit A

(13)

Jelly Rolls

(13)

Rossmann fold

(8)

60s Ribosomal Protein L30; Chain: A;

(1)

DNA polymerase; domain 1

(1)

Double Stranded RNA Binding Domain

(1)

Herpes Virus-1

(1)

Pfam accession / name  (11)

PF00347 : Ribosomal_L6

(103)

PF00820 : Lipoprotein_1

(28)

PF08007 : JmjC_2

(13)

PF21233 : RIOX1_C_WH

(10)

PF00899 : ThiF

(7)

PF16855 : Soc

(3)

PF20514 : ROXA-like_wH

(3)

PF02624 : YcaO

(1)

PF09836 : DUF2063

(1)

PF21084 : DUF4423_like

(1)

PF22106 : NGO1945_C

(1)

Diffraction protocol  (2)

Single wavelength

(138)

MAD

(2)

Diffraction radiation source type  (2)

Synchrotron

(138)

Rotating anode

(2)

Diffraction source  (35)

NSLS BEAMLINE X25

(27)

APS BEAMLINE 19-ID

(19)

NSLS BEAMLINE X29A

(16)

APS BEAMLINE 24-ID-C

(9)

APS BEAMLINE 22-ID

(8)

SLS BEAMLINE X06SA

(8)

APS BEAMLINE 23-ID-D

(6)

ESRF BEAMLINE ID23-2

(6)

APS BEAMLINE 17-ID

(5)

SLS BEAMLINE X10SA

(5)

ESRF BEAMLINE ID29

(4)

PHOTON FACTORY BEAMLINE BL-5A

(4)

SSRF BEAMLINE BL17U

(4)

DIAMOND BEAMLINE I02

(3)

ESRF BEAMLINE ID23-1

(3)

ALS BEAMLINE 8.2.2

(2)

APS BEAMLINE 8-BM

(2)

DIAMOND BEAMLINE I03

(2)

DIAMOND BEAMLINE I04-1

(2)

ALS BEAMLINE 8.2.1

(1)

APS BEAMLINE 14-BM-C

(1)

APS BEAMLINE 14-ID-B

(1)

APS BEAMLINE 19-BM

(1)

APS BEAMLINE 21-ID-D

(1)

APS BEAMLINE 22-BM

(1)

APS BEAMLINE 23-ID-B

(1)

APS BEAMLINE 24-ID-E

(1)

DIAMOND BEAMLINE I04

(1)

ESRF BEAMLINE BM1A

(1)

NSLS BEAMLINE X12B

(1)

NSLS BEAMLINE X12C

(1)

PHOTON FACTORY BEAMLINE AR-NW12A

(1)

RIGAKU

(1)

RIGAKU RU300

(1)

SSRL BEAMLINE BL9-2

(1)

Synchrotron site  (9)

APS

(56)

NSLS

(45)

ESRF

(14)

SLS

(13)

Diamond

(8)

Photon Factory

(5)

SSRF

(4)

ALS

(3)

SSRL

(1)

Diffraction detector type  (3)

CCD

(114)

Pixel

(17)

Image plate

(10)

Refinement software  (7)

CNS

(79)

REFMAC

(36)

PHENIX

(23)

CNX

(3)

autoBUSTER

(3)

X-PLOR

(2)

BUSTER-TNT

(1)

EM microscope model  (3)

FEI TITAN KRIOS

(13)

FEI TECNAI ARCTICA

(1)

JEOL 3200FSC

(1)

EM detector name  (3)

FEI FALCON II (4k x 4k)

(12)

GATAN K2 SUMMIT (4k x 4k)

(2)

FEI FALCON III (4k x 4k)

(1)

NMR software packages  (6)

CYANA

(1)

KUJIRA

(1)

NMRPipe

(1)

NMRView

(1)

Olivia

(1)

XwinNMR

(1)

NMR Field Strength

600.0 - 700

(1)

700.0 - 800

(1)

Representative Structures

100%

95%

90%

70%

50%

40%

30%