All structure family : Ribosomal protein L14
 
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Latest PDB release
Entries released this week  (1)
revised
(4)
 
Entry Information
Entry status  (1)
REL
(124)
 
Experimental methods  (2)
X-ray diffraction
(91)
Electron Microscopy
(33)
 
Authors  (265)
Steitz TA
(62)
Moore PB
(48)
Blaha G
(28)
Schmeing TM
(22)
Gurel G
(18)
Gürel G
(18)
Ban N
(16)
Schroeder SJ
(16)
Yonath A
(15)
Bashan A
(14)
Hansen JL
(14)
Zimmerman E
(14)
Rozenberg H
(13)
Strobel SA
(13)
Huang KS
(12)
Matzov D
(12)
Krupkin M
(11)
Eyal Z
(10)
Kitchen DE
(9)
Boehringer D
(8)
Fucini P
(8)
Leibundgut M
(8)
Wekselman I
(8)
Connell SR
(7)
Nissen P
(7)
Spahn CMT
(7)
Tu D
(7)
Wilson DN
(7)
Harms JM
(6)
Ippolito JA
(6)
Schluenzen F
(6)
Hansen J
(5)
Paukner S
(5)
Beckmann R
(4)
Belousoff MJ
(4)
Jomaa A
(4)
Mielke T
(4)
Ramakrishnan V
(4)
Spahn CM
(4)
Stachelhaus T
(4)
Zaborowska Z
(4)
Ahmed T
(3)
Amunts A
(3)
Bai XC
(3)
Bhushan S
(3)
Brown A
(3)
Buerger J
(3)
Burger J
(3)
Bürger J
(3)
Chen JM
(3)
Granskog K
(3)
Han S
(3)
Hilal T
(3)
Huband MD
(3)
Kanyo ZF
(3)
Loerke J
(3)
Magee TV
(3)
Maguire BA
(3)
Marr ES
(3)
McCurdy SP
(3)
Nguyen TT
(3)
Nierhaus KH
(3)
Nikolay R
(3)
Qin B
(3)
Shanmugasundaram V
(3)
Subashi TA
(3)
Textoris-Taube K
(3)
Yonath AE
(3)
Aibara S
(2)
Arakawa K
(2)
Arenz S
(2)
Bamert RS
(2)
Belousoff M
(2)
Ben Hamou R
(2)
Benhamou RI
(2)
Berninghausen O
(2)
Bieri P
(2)
Brandi L
(2)
Churcher M
(2)
Davidovich C
(2)
Diskin Posner Y
(2)
Duffy EM
(2)
Fabbretti A
(2)
Fridman M
(2)
Friedlander G
(2)
Gao N
(2)
Giudice E
(2)
Gualerzi CO
(2)
Halfon Y
(2)
He CG
(2)
Hilcenko C
(2)
Ingmer H
(2)
Jin L
(2)
Kaminishi T
(2)
Kay RR
(2)
Kimanius D
(2)
Kinashi H
(2)
Kjeldgaard J
(2)
Klein DJ
(2)
Lindahl L
(2)
 
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Homo / hetero assembly  (2)
hetero
(123)
homo
(1)
 
Assembly composition  (3)
RNA/protein complex
(121)
DNA/RNA hybrid/RNA/protein complex
(2)
protein structure
(1)
 
Assembly polymer count  (18)
31-mer
(41)
30-mer
(20)
32-mer
(20)
28-mer
(8)
29-mer
(5)
33-mer
(5)
34-mer
(4)
35-mer
(4)
36-mer
(4)
27-mer
(3)
26-mer
(2)
undecamer
(2)
37-mer
(1)
43-mer
(1)
51-mer
(1)
55-mer
(1)
56-mer
(1)
dimer
(1)
 
Resolution distribution
1.0 - 1.5
(1)
2.0 - 2.5
(14)
2.5 - 3
(47)
3.0 - 3.5
(40)
3.5 - 4
(19)
9.0 - 9.5
(2)
9.5 - 10
(1)
 
Release year distribution
1995 - 2000
(2)
2000 - 2005
(40)
2005 - 2010
(54)
2010 - 2015
(21)
2015 - 2020
(39)
 
Journal  (22)
J Mol Biol
(26)
Mol Cell
(21)
Proc Natl Acad Sci U S A
(16)
Cell
(7)
Nature
(7)
Nucleic Acids Res
(7)
Bioorg Med Chem Lett
(4)
Nat Commun
(4)
Nat Struct Mol Biol
(4)
RNA
(4)
Sci Rep
(4)
Antimicrob Agents Chemother
(3)
Structure
(3)
Cell Rep
(2)
ChemMedChem
(2)
EMBO J
(2)
Science
(2)
J Med Chem
(1)
Mol Microbiol
(1)
Nat Struct Biol
(1)
Protein Cell
(1)
To be published
(1)
 
Macromolecules
Organism superkingdom  (3)
Archaea
(66)
Bacteria
(47)
Eukaryota
(11)
 
Organism name  (15)
Haloarcula marismortui
(66)
Deinococcus radiodurans
(13)
Escherichia coli
(10)
Staphylococcus aureus subsp. aureus NCTC 8325
(7)
Deinococcus radiodurans R1
(4)
Escherichia coli K-12
(4)
Mycolicibacterium smegmatis MC2 155
(4)
Spinacia oleracea
(4)
Homo sapiens
(3)
Staphylococcus aureus
(3)
Dictyostelium discoideum
(2)
Geobacillus stearothermophilus
(1)
Mycobacterium tuberculosis
(1)
Saccharomyces cerevisiae BY4741
(1)
Sus scrofa
(1)
 
Molecule name  (20)
Large ribosomal subunit protein uL14
(115)
50S ribosomal protein L14
(113)
Hl27
(66)
Hmal14
(66)
39S ribosomal protein L14, mitochondrial
(4)
50S ribosomal protein L14, chloroplastic
(4)
Large ribosomal subunit protein uL14c
(4)
Large ribosomal subunit protein uL14m
(4)
Ribosomal protein CS-L29
(4)
39S ribosomal protein L32, mitochondrial
(3)
L14mt
(3)
L32mt
(3)
MRP-L14
(3)
MRP-L32
(3)
60S ribosomal protein L23
(2)
60S ribosomal protein L23-A
(1)
L17a
(1)
Large ribosomal subunit protein uL14A
(1)
Mitochondrial ribosomal protein L14
(1)
YL32
(1)
 
Molecule type  (1)
Protein
(124)
 
Gene names  (21)
rpl14
(70)
rrnAC1602
(66)
rplN
(47)
DR_0321
(17)
JW3272
(14)
b3310
(14)
SAOUHSC_02502
(10)
MRPL14
(4)
MSMEG_1465
(4)
MSMEI_1429
(4)
MRPL32
(3)
RPML32
(3)
DDB_G0290315
(2)
rpl23
(2)
MTCY210.33
(1)
RPL17A
(1)
RPL17AA
(1)
RPL23A
(1)
Rv0714
(1)
YBL0713
(1)
YBL087C
(1)
 
Interacting Molecules  (268)
Large ribosomal subunit protein uL3
(115)
23S ribosomal RNA
(114)
5S ribosomal RNA
(114)
Large ribosomal subunit protein uL13
(112)
Large ribosomal subunit protein uL15
(112)
Large ribosomal subunit protein uL18
(112)
Large ribosomal subunit protein uL2
(112)
Large ribosomal subunit protein uL22
(112)
Large ribosomal subunit protein uL23
(112)
Large ribosomal subunit protein uL24
(112)
Large ribosomal subunit protein uL29
(112)
Large ribosomal subunit protein uL30
(112)
Large ribosomal subunit protein uL4
(112)
Large ribosomal subunit protein uL6
(112)
Large ribosomal subunit protein uL16
(111)
Large ribosomal subunit protein uL5
(110)
Large ribosomal subunit protein uL10
(77)
Large ribosomal subunit protein uL11
(72)
Large ribosomal subunit protein eL24
(68)
Large ribosomal subunit protein eL32
(67)
Large ribosomal subunit protein eL18
(66)
Large ribosomal subunit protein eL19
(66)
Large ribosomal subunit protein eL21
(66)
Large ribosomal subunit protein eL31
(66)
Large ribosomal subunit protein eL37
(66)
Large ribosomal subunit protein eL39
(66)
Large ribosomal subunit protein eL42
(66)
Large ribosomal subunit protein eL8
(66)
Large ribosomal subunit protein eL15
(65)
Large ribosomal subunit protein eL43
(65)
Large ribosomal subunit protein bL17
(46)
Large ribosomal subunit protein bL19
(46)
Large ribosomal subunit protein bL20
(46)
Large ribosomal subunit protein bL21
(46)
Large ribosomal subunit protein bL27
(46)
Large ribosomal subunit protein bL32
(46)
Large ribosomal subunit protein bL35
(46)
Large ribosomal subunit protein bL25
(45)
Large ribosomal subunit protein bL34
(45)
Large ribosomal subunit protein bL28
(39)
Large ribosomal subunit protein bL33
(31)
Large ribosomal subunit protein bL36
(23)
Large ribosomal subunit protein bL9
(20)
Large ribosomal subunit protein bL36A
(11)
Large ribosomal subunit protein bL31
(7)
Large ribosomal subunit protein bL33B
(5)
Large ribosomal subunit protein bL12
(4)
Large ribosomal subunit protein bL17c
(4)
Large ribosomal subunit protein bL17m
(4)
Large ribosomal subunit protein bL19c
(4)
Large ribosomal subunit protein bL19m
(4)
Large ribosomal subunit protein bL20c
(4)
Large ribosomal subunit protein bL21c
(4)
Large ribosomal subunit protein bL21m
(4)
Large ribosomal subunit protein bL27c
(4)
Large ribosomal subunit protein bL28c
(4)
Large ribosomal subunit protein bL32c
(4)
Large ribosomal subunit protein bL32m
(4)
Large ribosomal subunit protein bL33c
(4)
Large ribosomal subunit protein bL34c
(4)
Large ribosomal subunit protein bL34m
(4)
Large ribosomal subunit protein bL35c
(4)
Large ribosomal subunit protein bL35m
(4)
Large ribosomal subunit protein bL36c
(4)
Large ribosomal subunit protein bL9c
(4)
Large ribosomal subunit protein bL9m
(4)
Large ribosomal subunit protein cL37 alpha
(4)
Large ribosomal subunit protein cL38
(4)
Large ribosomal subunit protein uL10m
(4)
Large ribosomal subunit protein uL11m
(4)
Large ribosomal subunit protein uL13c
(4)
Large ribosomal subunit protein uL15c
(4)
Large ribosomal subunit protein uL16c
(4)
Large ribosomal subunit protein uL16m
(4)
Large ribosomal subunit protein uL18c
(4)
Large ribosomal subunit protein uL22c
(4)
Large ribosomal subunit protein uL23c
(4)
Large ribosomal subunit protein uL24c
(4)
Large ribosomal subunit protein uL24m
(4)
Large ribosomal subunit protein uL29c
(4)
Large ribosomal subunit protein uL29m
(4)
Large ribosomal subunit protein uL2cz/uL2cy
(4)
Large ribosomal subunit protein uL30m
(4)
Large ribosomal subunit protein uL3c
(4)
Large ribosomal subunit protein uL4c
(4)
Large ribosomal subunit protein uL5c
(4)
Large ribosomal subunit protein uL6c
(4)
Signal recognition particle protein
(4)
16S ribosomal RNA
(3)
Alkaline phosphatase
(3)
Eukaryotic translation initiation factor 6
(3)
Large ribosomal subunit protein bL20m
(3)
Large ribosomal subunit protein bL27m
(3)
Large ribosomal subunit protein bL28m
(3)
Large ribosomal subunit protein bL31c
(3)
Large ribosomal subunit protein bL33A
(3)
Large ribosomal subunit protein bL33m
(3)
Large ribosomal subunit protein mL37
(3)
Large ribosomal subunit protein mL38
(3)
Large ribosomal subunit protein mL39
(3)
 
More...
 
Interacting ligands  (2)
CL : CHLORIDE ION
(65)
MG : MAGNESIUM ION
(58)
 
Function and Biology
Biological function  (5)
structural constituent of ribosome
(124)
large ribosomal subunit rRNA binding
(120)
rRNA binding
(117)
protein binding
(14)
RNA binding
(3)
 
Biological process  (3)
translation
(124)
cytoplasmic translation
(15)
mitochondrial translation
(3)
 
Biological cell component  (12)
ribosome
(124)
ribonucleoprotein complex
(123)
cytosolic large ribosomal subunit
(120)
large ribosomal subunit
(51)
cytoplasm
(15)
cytosol
(15)
chloroplast
(4)
mitochondrial inner membrane
(3)
mitochondrial large ribosomal subunit
(3)
mitochondrion
(3)
extracellular matrix
(2)
plasma membrane
(1)
 
Sequence and Structure classification
SCOP fold  (2)
Ribosomal protein L14
(52)
Ribosome and ribosomal fragments
(17)
 
SCOP family  (2)
Ribosomal protein L14
(52)
Large subunit
(17)
 
CATH class  (1)
Mainly Beta
(119)
 
CATH topology  (1)
Ribosomal Protein L14
(119)
 
Pfam accession / name  (1)
PF00238 : Ribosomal_L14
(124)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(92)
 
Diffraction radiation source type  (1)
Synchrotron
(91)
 
Diffraction source  (14)
NSLS BEAMLINE X25
(26)
APS BEAMLINE 19-ID
(21)
NSLS BEAMLINE X29A
(16)
APS BEAMLINE 24-ID-C
(9)
SLS BEAMLINE X06SA
(8)
ESRF BEAMLINE ID23-2
(6)
ESRF BEAMLINE ID29
(5)
ESRF BEAMLINE ID23-1
(3)
SLS BEAMLINE X10SA
(3)
ALS BEAMLINE 8.2.2
(2)
APS BEAMLINE 8-BM
(2)
ESRF BEAMLINE BM1A
(1)
ESRF BEAMLINE ID14-4
(1)
NSLS BEAMLINE X12C
(1)
 
Synchrotron site  (5)
NSLS
(43)
APS
(32)
ESRF
(16)
SLS
(11)
ALS
(2)
 
Diffraction detector type  (3)
CCD
(78)
Pixel
(11)
Image plate
(5)
 
Refinement software  (7)
CNS
(70)
PHENIX
(27)
CNX
(3)
REFMAC
(3)
autoBUSTER
(3)
TNT
(1)
X-PLOR
(1)
 
EM microscope model  (6)
FEI TITAN KRIOS
(25)
FEI POLARA 300
(3)
FEI TECNAI F20
(2)
FEI TECNAI ARCTICA
(1)
FEI TECNAI F30
(1)
JEOL 3200FSC
(1)
 
EM detector name  (4)
FEI FALCON II (4k x 4k)
(19)
GATAN K2 SUMMIT (4k x 4k)
(10)
KODAK SO-163 FILM
(3)
GATAN K2 QUANTUM (4k x 4k)
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 10 of 124
Entries 1 to 10 of 124
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50S subunit with EF-G(GDPNP) and RRF bound
Gao N, Zavialov AV, Ehrenberg M, Frank J
J Mol Biol (2007) [PMID: 17996252  ]
Source organism: Escherichia coli  
Assembly composition: RNA/protein complex
PDBe complex ID: PDB-CPX-249951 (Preferred)   search this ID
PDBe-KB: P0ADY3    P0A805    P60422    P0A7J7    P0ADY7    P61175    (view 26 more)
Electron Microscopy
9.1Å resolution
Released: 4 Mar 2008
Model geometry
Fit model/data
Data not analysed
2rdo
2rdo
2rdo
Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with Tiamulin
Schluenzen F, Pyetan E, Fucini P, Yonath A, Harms JM
Mol Microbiol (2004) [PMID: 15554968  ]
Assembly composition: RNA/protein complex
Bound ligands: MUL   
Assembly name: Large ribosomal protein and RNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-155895 (Preferred)   search this ID
PDBe-KB: Q9RXJ2    Q9RY65    Q9RSL0    Q9RSS4    Q9RSW6    Q9RXY1    (view 23 more)
X-ray diffraction
3.5Å resolution
Released: 1 Mar 2005
Model geometry
Fit model/data
Data not deposited
1xbp
1xbp
1xbp
MODEL OF E. COLI SRP BOUND TO 70S RNCS
Halic M, Blau M, Becker T, Mielke T, Pool MR, Wild K, Sinning I, Beckmann R
Nature (2006) [PMID: 17086193  ]
Source organism: Escherichia coli K-12  
Assembly composition: RNA/protein complex
Bound ligands: MG    MG   
PDBe complex ID: PDB-CPX-130261 (Preferred)   search this ID
PDBe-KB: P0ADY3    O62798    P60422    P0A7J7    P0ADY7    P61175    (view 25 more)
Electron Microscopy
9.5Å resolution
Released: 8 Nov 2006
Model geometry
Fit model/data
Data not analysed
2j28
2j28
2j28
The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
Jiang L, Abrahams JP
J Mol Biol (2009) [PMID: 19013177  ]
Source organism: Escherichia coli  
Assembly composition: RNA/protein complex
Bound ligands: MG    MG   
Assembly name: Large ribosomal protein (Preferred)   search this complex
PDBe complex ID: PDB-CPX-249965 (Preferred)   search this ID
PDBe-KB: P0ADY3    P60422    P0ADY7    P61175    P68919    P0A7P5    (view 22 more)
Electron Microscopy
10Å resolution
Released: 21 Oct 2008
Model geometry
Fit model/data
Data not analysed
3bbx
3bbx
3bbx
CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA
Science (2000) [PMID: 10937989  ]
Assembly composition: RNA/protein complex
Bound ligands: K    MG    K    MG    CD    CD   
Assembly name: Large ribosomal protein and RNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-145603 (Preferred)   search this ID
PDBe-KB: P22450    P29198    P14123    P10971    P32410    P12737    (view 21 more)
X-ray diffraction
2.4Å resolution
Released: 14 Aug 2000
Model geometry
Fit model/data
Data not analysed
1ffk
1ffk
1ffk
Thiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radiodurans
Harms JM, Wilson DN, Schluenzen F, Connell SR, Stachelhaus T, Zaborowska Z, Spahn CMT, Fucini P
Mol Cell (2008) [PMID: 18406324  ]
Assembly composition: RNA/protein complex
Bound ligands: MG    MG   
Modified residues: DBU    BB9    DCY    MH6    BB9    DBU    DHA    QUA    TS9    TS9    NH2    QUA    DCY    MH6    NH2   
PDBe complex ID: PDB-CPX-143180 (Preferred)   search this ID
PDBe-KB: Q9RXJ2    P0C8P8    Q9RY65    Q9RSL0    Q9RSS4    Q9RSW6    (view 23 more)
X-ray diffraction
3.3Å resolution
Released: 17 Jun 2008
Model geometry
Fit model/data
3cf5
3cf5
3cf5
The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning
Wilson DN, Schluenzen F, Harms JM, Starosta AL, Connell SR, Fucini P
Proc Natl Acad Sci U S A (2008) [PMID: 18757750  ]
Assembly composition: RNA/protein complex
Bound ligands: MG    ZN    ZLD    ZN    ZLD    MG   
Assembly name: Large ribosomal protein and RNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-155877 (Preferred)   search this ID
PDBe-KB: Q9RXJ2    Q9RY65    Q9RSL0    Q9RSS4    Q9RSW6    Q9RXY1    (view 22 more)
X-ray diffraction
3.5Å resolution
Released: 16 Sep 2008
Model geometry
Fit model/data
3dll
3dll
3dll
Girodazole bound to the large subunit of Haloarcula marismortui
Blaha G, Schroeder SJ, Tirado-Rives J
J Mol Biol (2007) [PMID: 17321546  ]
Assembly composition: RNA/protein complex
Bound ligands: K    MG    K    GIR    GIR    NA    CL    MG    CD    CD    NA   
Modified residues: OMG    OMU    UR3    1MA    1MA    PSU    PSU    OMG    OMU    UR3   
Assembly name: Large ribosomal protein and RNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-145570 (Preferred)   search this ID
PDBe-KB: P22450    P29198    P14123    P10971    P32410    P12737    (view 23 more)
X-ray diffraction
2.7Å resolution
Released: 3 Apr 2007
Model geometry
Fit model/data
2otl
2otl
2otl
Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit
Schroeder SJ, Blaha G
Antimicrob Agents Chemother (2007) [PMID: 17664317  ]
Assembly composition: RNA/protein complex
Bound ligands: K    MG    K    NEG    NA    CL    MG    NEG    CD    CD    NA   
Modified residues: OMG    OMU    UR3    1MA    1MA    PSU    PSU    OMG    OMU    UR3   
Assembly name: Large ribosomal protein and RNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-145572 (Preferred)   search this ID
PDBe-KB: P22450    P29198    P14123    P10971    P32410    P12737    (view 23 more)
X-ray diffraction
2.9Å resolution
Released: 30 Sep 2008
Model geometry
Fit model/data
2qex
2qex
2qex
A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit
Steitz TA, Kavran JM
J Mol Biol (2007) [PMID: 17599351  ]
Assembly composition: RNA/protein complex
Bound ligands: K    MG    K    NA    CL    MG    CD    CD    NA   
Modified residues: OMG    OMU    UR3    PSU    PSU    OMG    OMU    UR3   
Assembly name: Large ribosomal protein and RNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-145571 (Preferred)   search this ID
PDBe-KB: P22450    P29198    P14123    P10971    P32410    P12737    (view 23 more)
X-ray diffraction
3Å resolution
Released: 1 Apr 2008
Model geometry
Fit model/data
2qa4
2qa4
2qa4
...
Entries 1 to 10 of 124
Entries 1 to 10 of 124