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Molecule name (5)

Actin cross-linking toxin VgrG1

(8)

Co-chaperone DjlA N-terminal domain-containing protein

(2)

Tellurite resistance protein of COG3793

(1)

TerB

(1)

Uncharacterized protein

(1)

Molecule type (1)

Protein

(11)

Interacting ligands (11)

SO4 : SULFATE ION

(7)

GOL : GLYCEROL

(5)

ADP : ADENOSINE-5'-DIPHOSPHATE

(4)

MG : MAGNESIUM ION

(4)

MN : MANGANESE (II) ION

(3)

ATP : ADENOSINE-5'-TRIPHOSPHATE

(2)

ANP : PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER

(1)

CL : CHLORIDE ION

(1)

EDO : 1,2-ETHANEDIOL

(1)

I3A : 1H-INDOLE-3-CARBALDEHYDE

(1)

ZN : ZINC ION

(1)

Experimental methods (2)

X-ray diffraction

(10)

Solution NMR

(1)

Assembly composition (1)

protein structure

(11)

Assembly polymer count (3)

monomer

(9)

dimer

(1)

tetramer

(1)

Homo / hetero assembly (1)

homo

(11)

Journal (3)

J. Biol. Chem.

(7)

To be published

(3)

Protein Sci

(1)

Resolution distribution

1.5 - 2

(2)

2.0 - 2.5

(8)

Entry status (1)

REL

(11)

Gene names (7)

vgrG-1

(8)

vgrG1

(8)

VC0395_A1026

(7)

LV069

(1)

PG_1108

(1)

VC_1416

(1)

terB

(1)

Organism superkingdom (1)

Bacteria

(11)

Biological process (1)

actin filament organization

(8)

Biological function (1)

metal ion binding

(1)

SCOP family (2)

COG3793-like

(1)

PG1108-like

(1)

SCOP fold (1)

TerB-like

(2)

CATH class (1)

Mainly Alpha

(11)

CATH topology (1)

TerB-like

(11)

Refinement software (2)

BUSTER

(8)

REFMAC

(2)

Diffraction radiation source type (2)

Rotating anode

(6)

Synchrotron

(4)

Diffraction detector type (3)

Image plate

(6)

CCD

(2)

Pixel

(2)

Diffraction protocol (2)

Single wavelength

(9)

MAD

(1)

Synchrotron site (3)

SOLEIL

(2)

APS

(1)

SSRL

(1)

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Entry Information

Entry status (1)

REL

(11)

Experimental methods (2)

X-ray diffraction

(10)

Solution NMR

(1)

Authors (20)

Cambillau C

(8)

Derrez E

(8)

Durand E

(8)

Spinelli S

(8)

Audoly G

(7)

Cascales E

(7)

Ortiz-Lombardia M

(7)

Raoult D

(7)

Bigelow L

(1)

Chen C

(1)

Chiang S-K

(1)

Chiang SK

(1)

Joachimiak A

(1)

Joint Center for Structural Genomics (JCSG)

(1)

Lou Y-C

(1)

Lou YC

(1)

Midwest Center for Structural Genomics (MCSG)

(1)

Moy S

(1)

Nguyen VS

(1)

Nocek B

(1)

Homo / hetero assembly (1)

homo

(11)

Assembly composition (1)

protein structure

(11)

Assembly polymer count (3)

monomer

(9)

dimer

(1)

tetramer

(1)

Resolution distribution

1.5 - 2

(2)

2.0 - 2.5

(8)

Release year distribution

2005 - 2010

(3)

2010 - 2015

(8)

Journal (3)

J. Biol. Chem.

(7)

To be published

(3)

Protein Sci

(1)

Macromolecules

Organism superkingdom (1)

Bacteria

(11)

Organism name (5)

Vibrio cholerae

(7)

Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044

(1)

Nostoc punctiforme PCC 73102

(1)

Porphyromonas gingivalis

(1)

Vibrio cholerae O1 biovar El Tor str. N16961

(1)

Molecule name (5)

Actin cross-linking toxin VgrG1

(8)

Co-chaperone DjlA N-terminal domain-containing protein

(2)

Tellurite resistance protein of COG3793

(1)

TerB

(1)

Uncharacterized protein

(1)

Molecule type (1)

Protein

(11)

Gene names (7)

vgrG-1

(8)

vgrG1

(8)

VC0395_A1026

(7)

LV069

(1)

PG_1108

(1)

VC_1416

(1)

terB

(1)

Interacting ligands (11)

SO4 : SULFATE ION

(7)

GOL : GLYCEROL

(5)

ADP : ADENOSINE-5'-DIPHOSPHATE

(4)

MG : MAGNESIUM ION

(4)

MN : MANGANESE (II) ION

(3)

ATP : ADENOSINE-5'-TRIPHOSPHATE

(2)

ANP : PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER

(1)

CL : CHLORIDE ION

(1)

EDO : 1,2-ETHANEDIOL

(1)

I3A : 1H-INDOLE-3-CARBALDEHYDE

(1)

ZN : ZINC ION

(1)

Function and Biology

Biological function (1)

metal ion binding

(1)

Biological process (1)

actin filament organization

(8)

Sequence and Structure classification

SCOP fold (1)

TerB-like

(2)

SCOP family (2)

COG3793-like

(1)

PG1108-like

(1)

CATH class (1)

Mainly Alpha

(11)

CATH topology (1)

TerB-like

(11)

Pfam accession / name (2)

PF16671 : ACD

(8)

PF05099 : TerB

(2)

Experimental Information

Diffraction protocol (2)

Single wavelength

(9)

MAD

(1)

Diffraction radiation source type (2)

Rotating anode

(6)

Synchrotron

(4)

Diffraction source (5)

BRUKER AXS MICROSTAR

(5)

SOLEIL BEAMLINE PROXIMA 1

(2)

APS BEAMLINE 19-ID

(1)

OTHER

(1)

SSRL BEAMLINE BL1-5

(1)

Synchrotron site (3)

SOLEIL

(2)

APS

(1)

SSRL

(1)

Diffraction detector type (3)

Image plate

(6)

CCD

(2)

Pixel

(2)

Refinement software (2)

BUSTER

(8)

REFMAC

(2)

NMR

NMR software packages (1)

Xplor-NIH

(1)

NMR Field Strength

700.0 - 800

(1)

800.0 - 900

(1)

Representative Structures

100%

95%

90%

70%

50%

40%

30%

Search filters :

Crystal Structure of Protein of Unknown Function PG1108 from Porphyromonas gingivalis W83

Crystal structure of a tellurite resistance protein of cog3793 (npun_f6341) from nostoc punctiforme pcc 73102 at 1.85 A resolution

NMR solution structure of KP-TerB, a tellurite resistance protein from Klebsiella pneumoniae

Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ADP and Mn++

Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with AMP-PNP and Mg++

Structure and functional characterization of a Vibrio cholerae toxin from the MARTX/VgrG family.

Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ATP and Mg++

Structure of a VgrG Vibrio cholerae toxin ACD domain Glu16Gln mutant in complex with ADP and Mn++

Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ATP and Mn++

Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ADP and Mg++