Entries released this week  (1)

revised

(1)

Entry status  (1)

REL

(40)

Experimental methods  (1)

X-ray diffraction

(40)

Authors  (303)

Rouge L

(9)

Rougé L

(9)

Hearn BR

(7)

Zhang Y

(7)

Shi W

(6)

Wang L

(6)

Zhou T

(6)

Bashore C

(5)

Becker MM

(5)

Denison MR

(5)

Dueber EC

(5)

Graham BS

(5)

Joyce MG

(5)

Kanekiyo M

(5)

Kong WP

(5)

Kwong PD

(5)

Li Y

(5)

Mascola JR

(5)

Modjarrad K

(5)

Ozen A

(5)

Shi Y

(5)

Skelton NJ

(5)

Wang X

(5)

Özen A

(5)

Di Lello P

(4)

Gao GF

(4)

Liu X

(4)

Lu G

(4)

Maurer T

(4)

Murray JM

(4)

Qi J

(4)

Wang N

(4)

Wang Q

(4)

Yan J

(4)

Anderson KC

(3)

Arkoudis E

(3)

Bagci U

(3)

Bainbridge TW

(3)

Barker O

(3)

Blake RA

(3)

Buhrlage SJ

(3)

Cassidy E

(3)

Chauhan D

(3)

Chen X

(3)

Cohen F

(3)

Das D

(3)

Dhe-Paganon S

(3)

Dossang A

(3)

Drummond J

(3)

Engen JR

(3)

Ernst JA

(3)

Flasz J

(3)

Freeman M

(3)

Gavory G

(3)

Gu W

(3)

Harrison T

(3)

Helm M

(3)

Helm MD

(3)

Hensley L

(3)

Hu M

(3)

Hu W

(3)

Hughes C

(3)

Iacob RE

(3)

Jahrling P

(3)

Jiang L

(3)

Johnson JC

(3)

Kategaya L

(3)

Kleinheinz T

(3)

Lamberto I

(3)

Lees CR

(3)

Leung K

(3)

Li M

(3)

Li W

(3)

McClelland K

(3)

Miel H

(3)

Mikhailova T

(3)

Mollura DJ

(3)

Murray J

(3)

Ndubaku C

(3)

O'Dowd C

(3)

O'Dowd CR

(3)

Odrzywol E

(3)

Olinger G

(3)

Page N

(3)

Pastor R

(3)

Rao SS

(3)

Schauer NJ

(3)

Seo HS

(3)

Shi X

(3)

Solomon J

(3)

Subbarao K

(3)

Todd JP

(3)

Tsui V

(3)

Vogel L

(3)

Wang D

(3)

Weisberg EL

(3)

Wertz IE

(3)

Yang ZY

(3)

Yassine HM

(3)

Yuan Y

(3)

 

More...

Homo / hetero assembly  (2)

hetero

(20)

homo

(19)

Assembly composition  (2)

protein/protein complex

(20)

protein structure

(19)

Assembly polymer count  (4)

monomer

(16)

dimer

(10)

trimer

(10)

tetramer

(3)

Resolution distribution

1.0 - 1.5

(2)

1.5 - 2

(4)

2.0 - 2.5

(16)

2.5 - 3

(10)

3.0 - 3.5

(8)

Release year distribution

2000 - 2005

(2)

2005 - 2010

(4)

2010 - 2015

(13)

2015 - 2020

(27)

Journal  (17)

Structure

(7)

Nature

(6)

Nat Commun

(4)

Cell Chem Biol

(3)

J Virol

(3)

Acta Crystallogr F Struct Biol Commun

(2)

Cell

(2)

Cell Res

(2)

EMBO J

(2)

Nat Chem Biol

(2)

ACS Med Chem Lett

(1)

Cell Host Microbe

(1)

Cell Rep

(1)

J Infect Dis

(1)

J Med Chem

(1)

PLoS Biol

(1)

Sci Rep

(1)

Organism superkingdom  (2)

Eukaryota

(25)

Viruses

(15)

Organism name  (7)

Homo sapiens

(22)

Middle East respiratory syndrome-related coronavirus

(6)

Betacoronavirus England 1

(5)

Naja kaouthia

(3)

Human betacoronavirus 2c EMC/2012

(2)

Human betacoronavirus 2c Jordan-N3/2012

(1)

Tylonycteris bat coronavirus HKU4

(1)

Molecule name  (20)

Deubiquitinating enzyme 7

(22)

Herpesvirus-associated ubiquitin-specific protease

(22)

Ubiquitin carboxyl-terminal hydrolase 7

(22)

Ubiquitin thioesterase 7

(22)

Ubiquitin-specific-processing protease 7

(22)

E2

(15)

Peplomer protein

(15)

S glycoprotein

(15)

Spike glycoprotein

(15)

Spike protein S1

(15)

Spike protein S2

(15)

Spike protein S2'

(15)

S protein

(6)

CVF

(3)

CVFk

(3)

Cobra venom factor

(3)

Cobra venom factor alpha chain

(3)

Cobra venom factor beta chain

(3)

Cobra venom factor gamma chain

(3)

Complement C3 homolog

(3)

Molecule type  (1)

Protein

(40)

Gene names  (5)

2

(1)

3

(8)

HAUSP

(22)

USP7

(22)

S

(15)

Interacting Molecules  (22)

Ubiquitin

(6)

Cobra venom factor alpha chain

(3)

Cobra venom factor gamma chain

(3)

Complement factor B

(2)

D12 Fab Heavy chain

(2)

Dipeptidyl peptidase 4

(2)

4C2 heavy chain

(1)

4C2 light chain

(1)

Antibody CDC2-C2 heavy chain

(1)

Antibody CDC2-C2 light chain

(1)

D12 Fab Light chain

(1)

D12 Fab light chain

(1)

Heavy chain

(1)

Heavy chain of neutralizing antibody m336

(1)

JC57-14 Heavy chain

(1)

JC57-14 Light chain

(1)

Light chain

(1)

Light chain of neutralizing antibody m336

(1)

MCA1 heavy chain

(1)

MCA1 light chain

(1)

fab Heavy Chain

(1)

fab Light Chain

(1)

Interacting ligands  (27)

NAG : 2-acetamido-2-deoxy-beta-D-glucopyranose

(15)

GOL : GLYCEROL

(8)

SO4 : SULFATE ION

(3)

BMA : beta-D-mannopyranose

(2)

BR : BROMIDE ION

(2)

EDO : 1,2-ETHANEDIOL

(2)

MG : MAGNESIUM ION

(2)

PO4 : PHOSPHATE ION

(2)

8JM : 4-[2-amino-4-ethyl-5-(1H-indazol-5-yl)pyridin-3-yl]phenol

(1)

8JP : 6'-amino-4'-ethyl-5'-(4-hydroxyphenyl)-N-methyl[3,3'-bipyridine]-6-carboxamide

(1)

8QQ : 3-[4-(aminomethyl)phenyl]-2-methyl-6-[[4-oxidanyl-1-[(3~{R})-4,4,4-tris(fluoranyl)-3-phenyl-butanoyl]piperidin-4-yl]methyl]pyrazolo[4,3-d]pyrimidin-7-one

(1)

8RN : 7-bromanyl-3-[[4-oxidanyl-1-[(3~{R})-3-phenylbutanoyl]piperidin-4-yl]methyl]thieno[3,2-d]pyrimidin-4-one

(1)

8WK : 5-[[1-[(3~{S})-4,4-bis(fluoranyl)-3-(3-fluoranylpyrazol-1-yl)butanoyl]-4-oxidanyl-piperidin-4-yl]methyl]-1-(4-fluorophenyl)pyrazolo[3,4-d]pyrimidin-4-one

(1)

8WN : ~{N}-[2-[4-[4-[(1-methyl-4-oxidanylidene-pyrazolo[3,4-d]pyrimidin-5-yl)methyl]-4-oxidanyl-piperidin-1-yl]carbonylphenyl]phenyl]ethanesulfonamide

(1)

9HS : 7-chloro-3-({4-hydroxy-1-[(3S)-3-phenylbutanoyl]piperidin-4-yl}methyl)quinazolin-4(3H)-one

(1)

9QA : 7-chloro-3-{[4-hydroxy-1-(3-phenylpropanoyl)piperidin-4-yl]methyl}quinazolin-4(3H)-one

(1)

9QD : N-[3-({4-hydroxy-1-[(3R)-3-phenylbutanoyl]piperidin-4-yl}methyl)-4-oxo-3,4-dihydroquinazolin-7-yl]-3-(4-methylpiperazin-1-yl)propanamide

(1)

ACT : ACETATE ION

(1)

AJJ : 4-[3-(1-methylpiperidin-4-yl)-1,2,4-oxadiazol-5-yl]phenol

(1)

CA : CALCIUM ION

(1)

CQ5 : 3-[[4-oxidanyl-1-[(3~{R})-3-phenylbutanoyl]piperidin-4-yl]methyl]-6-(2-pyrrolidin-1-ylethylamino)pyrimidin-4-one

(1)

DMS : DIMETHYL SULFOXIDE

(1)

EPE : 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID

(1)

MAN : alpha-D-mannopyranose

(1)

MLA : MALONIC ACID

(1)

P6G : HEXAETHYLENE GLYCOL

(1)

ZN : ZINC ION

(1)

EC number / name  (1)

3.4.19.12 : Ubiquitinyl hydrolase 1

(22)

Biological function  (1)

cysteine-type deubiquitinase activity

(22)

Biological process  (1)

protein deubiquitination

(22)

Biological cell component  (1)

extracellular region

(3)

SCOP fold  (1)

Cysteine proteinases

(2)

SCOP family  (1)

Ubiquitin carboxyl-terminal hydrolase, UCH

(2)

CATH class  (2)

Mainly Beta

(40)

Alpha Beta

(15)

CATH topology  (5)

ubp-family deubiquitinating enzyme fold

(40)

Alpha-Beta Plaits

(15)

Immunoglobulin-like

(3)

OB fold (Dihydrolipoamide Acetyltransferase, E2P)

(3)

Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A

(1)

Pfam accession / name  (6)

PF00443 : UCH

(22)

PF09408 : bCoV_S1_RBD

(15)

PF01759 : NTR

(3)

PF07677 : A2M_recep

(3)

PF21308 : C3_CUB2

(3)

PF22486 : MATH_2

(1)

Diffraction protocol  (1)

Single wavelength

(40)

Diffraction radiation source type  (2)

Synchrotron

(38)

Rotating anode

(2)

Diffraction source  (21)

APS BEAMLINE 22-ID

(5)

SSRF BEAMLINE BL17U

(5)

ALS BEAMLINE 5.0.2

(4)

APS BEAMLINE 24-ID-C

(4)

APS BEAMLINE 21-ID-G

(2)

APS BEAMLINE 22-BM

(2)

ESRF BEAMLINE ID23-1

(2)

ESRF BEAMLINE MASSIF-1

(2)

SSRL BEAMLINE BL12-2

(2)

APS BEAMLINE 19-ID

(1)

BRUKER AXS MICROSTAR

(1)

CHESS BEAMLINE A1

(1)

DIAMOND BEAMLINE I03

(1)

DIAMOND BEAMLINE I04

(1)

NSLS BEAMLINE X25

(1)

PHOTON FACTORY BEAMLINE BL-5A

(1)

RIGAKU RU200

(1)

SSRF BEAMLINE BL17U1

(1)

SSRF BEAMLINE BL19U1

(1)

SSRL BEAMLINE BL11-1

(1)

SSRL BEAMLINE BL7-1

(1)

Synchrotron site  (9)

APS

(14)

SSRF

(7)

ALS

(4)

ESRF

(4)

SSRL

(4)

Diamond

(2)

CHESS

(1)

NSLS

(1)

Photon Factory

(1)

Diffraction detector type  (3)

CCD

(27)

Pixel

(10)

Image plate

(3)

Refinement software  (4)

PHENIX

(29)

REFMAC

(8)

CNS

(3)

BUSTER

(1)

Representative Structures

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