Capsid protein VP1 (Q6TS43)

Similar Proteins (5 )
Proteins with 90% or greater sequence identity to Q6TS43. There can be two types of similarities used in this section: First, the sequence of a PDB chain which is mapped to the protein of interest needs to be 90% identical to another PDB chain mapped to another protein of interest; i.e. this is the sequence identity of the PDB chains. Second, the UniProt sequence of a protein of interest is in the same UniRef90 cluster as the UniProt sequences of other proteins.

PDB Chain shown: 3jb6 D go to PDBe

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PDB Chain shown: 3jb6 D go to PDBe

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Similar Proteins with Structural Data (1)

These proteins are in the same UniRef90 cluster as the protein of interest and have one or more protein structures in PDB.

Protein Name
(UniProt accession)
Species
Representative Structures
Coverage
Available Structural Data
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Protein name (UniProt accession):  VP1 (D3JWE6)
Species:  Bombyx mori cypovirus 1
Protein segments mapped to PDB: 
PDB 3jb6 chain D (UniProt range 111 - 126)
Click to load the structure in Mol* above
PDB 3jb6 chain D (UniProt range 111 - 126)
Click to load the structure in Mol* above
Coverage:  1%
Available Structural Data: 
 2 Number of PDB structures
 2 Number of ligands
 2 Number of interaction partners
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Similar Proteins without Structural Data in the PDB (4)

These proteins do not have structures in the PDB, but a large segment can be mapped to a sequence with structure with minimum 90% sequence identity.

Protein Name (UniProt ID)
Species
Protein segments mapped to PDB
 
Protein name (UniProt accession):  VP1 protein (A0A6M3MXW2)
Species:  Lymantria dispar cypovirus 1
Protein segments mapped to PDB: 
PDB 3jb0 chain C (UniProt range 1 - 1333)
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PDB 3jb0
chain C
PDB 3jb0 chain C
Protein name (UniProt accession):  VP1 (A0A0S1LIT5)
Species:  Bombyx mori cypovirus 1
Protein segments mapped to PDB: 
PDB 3jb0 chain C (UniProt range 1 - 1333)
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PDB 3jb0
chain C
PDB 3jb0 chain C
Protein name (UniProt accession):  Putative major core protein (Q993A5)
Species:  Bombyx mori cypovirus 1
Protein segments mapped to PDB: 
PDB 3jb0 chain C (UniProt range 1 - 1333)
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PDB 3jb0
chain C
PDB 3jb0 chain C
Protein name (UniProt accession):  Major capsid protein VP1 (Q91IE1)
Species:  Lymantria dispar cypovirus 1 isolate Rao
Protein segments mapped to PDB: 
PDB 3jb0 chain C (UniProt range 1 - 1333)
Click to load the structure in Mol* above
PDB 3jb0
chain C
PDB 3jb0 chain C