Aggregated Views of Proteins
Photosystem I reaction center subunit III (Q85FS9)
Annotations
This section shows residue-level functional annotations available for the PDB entries related to this protein. These annotations are contributed by members of the PDBe-KB consortium or generated by weekly data pipelines. For more information see the PDBe-KB Wiki pages.
Download
Click to download annotations in .csv format
Rotate your device or view on a larger screen to see additional information
Annotated Residues
The visualisation is using UniProt numbering for residues, not PDB numbering.
View region
From
To
highlight-only
Hide sections
| Predicted ligand binding sites | |
| Biophysical parameters | |
| Domains | |
| Ligand binding sites | |
| Interaction interfaces | |
| Sequence conservation | |
Predicted ligand binding sites
P2Rank is a new open source software package for ligand binding site prediction from protein structure
Biophysical parameters
POPSCOMP is a method to analyse interactions between individual complex components of proteins and/or nucleic acids by calculating the solvent accessible surface area (SASA) buried upon complex formation.
POPSCOMP is a method to analyse interactions between individual complex components of proteins and/or nucleic acids by calculating the solvent accessible surface area (SASA) buried upon complex formation.
POPSCOMP is a method to analyse interactions between individual complex components of proteins and/or nucleic acids by calculating the solvent accessible surface area (SASA) buried upon complex formation.
Cospi-Depth is a server for computing/predicting depth, cavity sizes, ligand binding sites and pKa
Cospi-Depth is a server for computing/predicting depth, cavity sizes, ligand binding sites and pKa
Domains
Residues mapped to CATH domains
Residues mapped to InterPro domains
Ligand binding sites
Residues binding CHLOROPHYLL A<br><span style="display:inline-block;width:100%;text-align:center;margin-top:5px;"><img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/CLA_200.svg" /><span>
Residues binding BETA-CAROTENE<br><span style="display:inline-block;width:100%;text-align:center;margin-top:5px;"><img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/BCR_200.svg" /><span>
Residues binding 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE<br><span style="display:inline-block;width:100%;text-align:center;margin-top:5px;"><img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/3PH_200.svg" /><span>
Residues binding (2S)-2,3-dihydroxypropyl octadecanoate<br><span style="display:inline-block;width:100%;text-align:center;margin-top:5px;"><img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/3XQ_200.svg" /><span>
Interaction interfaces
Residues interacting with Photosystem I P700 chlorophyll a apoprotein A1 (Q85FY7)
Residues interacting with Photosystem I P700 chlorophyll a apoprotein A2 (Q85FY6)
Residues interacting with Photosystem I reaction center subunit IX (Q85FS8)
Residues interacting with Similar to light harvesting protein (M1VKK5)
Residues interacting with Photosystem I iron-sulfur center subunit VII (Q85FZ1)
Sequence conservation
Amino acid probabilities
The amino acid probabilities are calculated using HMM profiles based on multiple sequence alignments. Click to see more details...
Data displayed by
Download MSA
Click to download the multiple sequence alignment (MSA) file
Amino acid properties
Aromatic
Polar
Hydrophobic
Negative charge
Proline
Positive charge
Cysteine
Glycine
Variants
Filter Consequence
Filter Provenance
Annotations :
Predicted annotations
Domains :
CATH domains
InterPro annotations