Aggregated Views of Proteins
Centromere protein M (Q9NSP4)
Annotations
This section shows residue-level functional annotations available for the PDB entries related to this protein. These annotations are contributed by members of the PDBe-KB consortium or generated by weekly data pipelines. For more information see the PDBe-KB Wiki pages.
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Annotated Residues
The visualisation is using UniProt numbering for residues, not PDB numbering.
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| Predicted PTM sites | |
| Biophysical parameters | |
| Domains | |
| Ligand binding sites | |
| Interaction interfaces | |
Predicted PTM sites
A Comprehensive Resource of Human Phosphosites within Their Full Context
Biophysical parameters
POPSCOMP is a method to analyse interactions between individual complex components of proteins and/or nucleic acids by calculating the solvent accessible surface area (SASA) buried upon complex formation.
POPSCOMP is a method to analyse interactions between individual complex components of proteins and/or nucleic acids by calculating the solvent accessible surface area (SASA) buried upon complex formation.
POPSCOMP is a method to analyse interactions between individual complex components of proteins and/or nucleic acids by calculating the solvent accessible surface area (SASA) buried upon complex formation.
Cospi-Depth is a server for computing/predicting depth, cavity sizes, ligand binding sites and pKa
Cospi-Depth is a server for computing/predicting depth, cavity sizes, ligand binding sites and pKa
3D Complex is a hierarchical classification of protein complexes that describes similarities in structure, sequence, as well as topology of contacts of the constituent proteins
3D Complex is a hierarchical classification of protein complexes that describes similarities in structure, sequence, as well as topology of contacts of the constituent proteins
Domains
Residues mapped to CATH domains
Residues mapped to InterPro domains
Ligand binding sites
Residues binding GLYCEROL<br><span style="display:inline-block;width:100%;text-align:center;margin-top:5px;"><img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/GOL_200.svg" /><span>
Interaction interfaces
Residues interacting with Centromere protein I (Q92674)
Residues interacting with Centromere protein K (Q9BS16)
Residues interacting with Centromere protein H (Q9H3R5)
Residues interacting with Centromere protein N (Q96H22)
Residues interacting with Centromere protein L (Q8N0S6)
Residues interacting with Other
Residues interacting with Centromere protein C (Q03188)
Sequence conservation
Amino acid probabilities
The amino acid probabilities are calculated using HMM profiles based on multiple sequence alignments. Click to see more details...
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Amino acid properties
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Proline
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Glycine
Variants
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Predicted annotations
Domains :
CATH domains
InterPro annotations