superfamily
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6-phosphogluconate dehydrogenase-like
SCOP ID: 3000048
Superfamily region spans from the first common strands to the last common helix, 8-stranded beta-sheet, order:32145678, strands 7 and 8 are parallel to each other and antiparallel to the rest
Families [ 14 entries ]
extra C-terminal helices form dimerisation subdomain; in some proteins this region is duplicated and the repeated regions are similarly packed as in the dimer
SCOP ID 4000104Structure Viewer
contains additional short C-terminal strand contributing to the dimerisation interface
structure comprises two domains and is similar to the Glycerol-3-phosphate dehydrogenase-like subunit structure, but is decorated with additional structural elements
extra C-terminal helices form dimerisation subdomain, where the different subunits interlock; in some proteins this region is duplicated and the repeated regions are similarly packed as in the dimer, forming a figure-8 knot
extra C-terminal helices form dimerisation subdomain; in some proteins this region is duplicated and the repeated regions are similarly packed as in the dimer
SCOP ID 4000108Structure Viewer
ND: PF03807; CD: PF09130, dimerises via the common long helix, like many other families, but differs in the arrangement of extra C-terminal helices
3 domains domain 1: coenzyme-binding domain; domain 2: dimerisation domain, in whichsegment-swapping observed in some proteins; domain 3: substrate-binding domain of the adenine nucleotide alpha-hydrolase-like fold, parallel beta-sheet, order:32145
structure comprises two domains and is similar to the Glycerol-3-phosphate dehydrogenase-like subunit structure
subunit structure comprises two domains, the C-terminal domain is multihelical and provides dimerisation interface distinct from other families
structure comprises two domains and is similar to the Glycerol-3-phosphate dehydrogenase-like subunit structure
2 domains, the C-terminal dimerisation domain is multihelical with interlocking subunit interface, like in type I KARI proteins
SCOP ID 4000114Structure Viewer
2 domains, the N-terminal Rossmann-like domain binds a different cofactor and lacks the ADP-binding motif; domain 2 is multihelical dimerisation domain; the connecting helix is broken in two pieces, providing a hinge between the domains
2 domains, the C-terminal dimerisation domain is multihelical with interlocking subunit interface, distinct from ProC and type I KARI
SCOP ID 4000116Structure Viewer
ND: PF03807 or PF10727; CD: PF10728 (DUF2520), dimerises via the common long helix, like many other families, but differs in the arrangement of extra C-terminal helices
Domains [ 44 entries ]
ID
Region
ProteinPutative ketol-acid reductoisomerase 2
SpeciesSaccharolobus solfataricus P2
3-333
Representative domain 8100428Structure Viewer
Represented structures [ 203 ]
C:3-333
ProteinHydroxyacyl-coenzyme A dehydrogenase, mitochondrial
SpeciesHomo sapiens
24-238
Representative domain 8001136Structure Viewer
Represented structures [ 23 ]
A:12-226
ProteinPrephenate dehydrogenase
SpeciesAquifex aeolicus VF5
31-231
Representative domain 8001196Structure Viewer
Represented structures [ 15 ]
B:31-231
ProteinGDP-mannose 6-dehydrogenase
SpeciesPseudomonas aeruginosa PAO1
1-236
Representative domain 8056192Structure Viewer
Represented structures [ 11 ]
A:1-236
ProteinPyrroline-5-carboxylate reductase
SpeciesStreptococcus pyogenes serotype M1
1-185
Representative domain 8058540Structure Viewer
Represented structures [ 9 ]
A:1-185
ProteinKetol-acid reductoisomerase (NADP(+))
SpeciesStreptococcus pneumoniae D39
2-326
Representative domain 8099096Structure Viewer
Represented structures [ 9 ]
A:2-326
Protein3-hydroxyisobutyrate dehydrogenase
SpeciesThermus thermophilus HB8
2-190
Representative domain 8001103Structure Viewer
Represented structures [ 7 ]
A:2-190
ProteinFatty acid oxidation complex subunit alpha
SpeciesPseudomonas fragi
315-519
Representative domain 8017508Structure Viewer
Represented structures [ 7 ]
A:315-519
ProteinKetol-acid reductoisomerase, chloroplastic
SpeciesSpinacia oleracea
106-343
Representative domain 8017592Structure Viewer
Represented structures [ 7 ]
A:106-343
ProteinGlycerol-3-phosphate dehydrogenase [NAD(+)], glycosomal
SpeciesLeishmania mexicana
9-225
Representative domain 8058538Structure Viewer
Represented structures [ 7 ]
A:9-225
ProteinKetol-acid reductoisomerase (NADP(+))
SpeciesStaphylococcus aureus subsp. aureus NCTC 8325
2-326
Representative domain 8103839Structure Viewer
Represented structures [ 7 ]
B:2-326
Protein5,10-methenyltetrahydromethanopterin hydrogenase
SpeciesMethanocaldococcus jannaschii DSM 2661
1-276
Representative domain 8001190Structure Viewer
Represented structures [ 5 ]
A:1-276
Protein2-dehydropantoate 2-reductase
SpeciesEscherichia coli K-12
1-191
Representative domain 8001177Structure Viewer
Represented structures [ 4 ]
A:1-191
Protein6-phosphogluconate dehydrogenase, decarboxylating
SpeciesOvis aries
2-211
Representative domain 8017573Structure Viewer
Represented structures [ 4 ]
A:1-210
ProteinF420-dependent NADP reductase
SpeciesArchaeoglobus fulgidus DSM 4304
1-203
Representative domain 8001098Structure Viewer
Represented structures [ 3 ]
A:1-203
ProteinKetol-acid reductoisomerase (NADP(+))
SpeciesPseudomonas aeruginosa PAO1
17-217
Representative domain 8001124Structure Viewer
Represented structures [ 3 ]
A:17-217
ProteinPrephenate dehydrogenase
SpeciesSynechocystis sp. PCC 6803 substr. Kazusa
1-196
Representative domain 8058542Structure Viewer
Represented structures [ 3 ]
A:1-196
ProteinReduced coenzyme F420:NADP oxidoreductase
SpeciesThermobifida fusca YX
8-223
Representative domain 8063874Structure Viewer
Represented structures [ 3 ]
A:8-223
ProteinMetalloreductase STEAP4
SpeciesRattus norvegicus
19-195
Representative domain 8063876Structure Viewer
Represented structures [ 3 ]
A:19-195
ProteinMetalloreductase STEAP3
SpeciesHomo sapiens
29-209
Representative domain 8063878Structure Viewer
Represented structures [ 3 ]
A:29-209
ProteinKetol-acid reductoisomerase (NADP(+))
SpeciesCorynebacterium glutamicum ATCC 13032
3-329
Representative domain 8094142Structure Viewer
Represented structures [ 3 ]
B:3-329
ProteinMannitol dehydrogenase
SpeciesPseudomonas fluorescens
21-314
Representative domain 8001119Structure Viewer
Represented structures [ 2 ]
A:21-314
ProteinOxidoreductase
SpeciesLactobacillus plantarum WCFS1
1-179
Representative domain 8063880Structure Viewer
Represented structures [ 2 ]
A:1-179
ProteinHydroxyacyl-coenzyme A dehydrogenase, mitochondrial
SpeciesSus scrofa
24-238
Representative domain 8085161Structure Viewer
Represented structures [ 2 ]
A:12-226
ProteinConserved protein
SpeciesMethanothermobacter thermautotrophicus str. Delta H
2-184
Representative domain 8001149Structure Viewer
Represented structures [ 1 ]
A:2-184
ProteinUDP-glucose 6-dehydrogenase
SpeciesStreptococcus pyogenes
1-229
Representative domain 8001155Structure Viewer
Represented structures [ 1 ]
A:1-229
ProteinGlycerol-3-phosphate dehydrogenase [NAD(P)+]
SpeciesArchaeoglobus fulgidus DSM 4304
1-210
Representative domain 8001170Structure Viewer
Represented structures [ 1 ]
A:1-210
ProteinPyrroline-5-carboxylate reductase
SpeciesNeisseria meningitidis MC58
1-186
Representative domain 8001183Structure Viewer
Represented structures [ 1 ]
A:1-186
ProteinDUF2520 domain-containing protein
SpeciesThermotoga maritima MSB8
2-184
Representative domain 8001204Structure Viewer
Represented structures [ 1 ]
A:2-184
Protein6-phosphogluconate dehydrogenase, decarboxylating
SpeciesTrypanosoma brucei brucei
2-212
Representative domain 8058536Structure Viewer
Represented structures [ 1 ]
A:1-211
ProteinT-protein
SpeciesHaemophilus influenzae Rd KW20
92-301
Representative domain 8058544Structure Viewer
Represented structures [ 1 ]
B:92-301
ProteinKetol-acid reductoisomerase (NADP(+))
SpeciesMycobacterium tuberculosis H37Rv
5-329
Representative domain 8088696Structure Viewer
Represented structures [ 1 ]
A:1-325
ProteinNAD-dependent L-serine dehydrogenase
SpeciesPseudomonas aeruginosa PAO1
1-197
Representative domain 8089691Structure Viewer
Represented structures [ 1 ]
A:1-197
ProteinRossmann-like domain-containing protein
SpeciesCorynebacterium glutamicum ATCC 13032
2-130
Representative domain 8090778Structure Viewer
Represented structures [ 1 ]
A:2-130
ProteinF420_oxidored domain-containing protein
SpeciesSinorhizobium meliloti 1021
1-186
Representative domain 8090779Structure Viewer
Represented structures [ 1 ]
B:1-186
ProteinGlutamyl-tRNA reductase
SpeciesBacteroides fragilis NCTC 9343
4-198
Representative domain 8090780Structure Viewer
Represented structures [ 1 ]
A:4-198
ProteinUncharacterized protein
SpeciesJannaschia sp. CCS1
8-218
Representative domain 8090783Structure Viewer
Represented structures [ 1 ]
B:8-218
ProteinOpine dehydrogenase
SpeciesArthrobacter sp. 1C
4-216
ProteinD-apionate oxidoisomerase
SpeciesCupriavidus necator N-1
1-210
Protein2-hydroxy-3-oxopropionate reductase
SpeciesSalmonella enterica subsp. enterica serovar Typhimurium str. LT2
3-198
ProteinDUF1932 domain-containing protein
SpeciesSinorhizobium meliloti 1021
1-197
ProteinNAD-binding phsophogluconase dehydrogenase-like protein
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
1-191
ProteinGlyoxylate/succinic semialdehyde reductase 1
SpeciesArabidopsis thaliana
1-195
ProteinKetol-acid reductoisomerase (NADP(+))
SpeciesCampylobacter jejuni
2-330