superfamilySm-like ribonucleoproteins
family
Sm motif of small nuclear ribonucleoproteins, SNRNP
SCOP ID: 4001809
forms homo and heteroheptameric ring structures
Function function unknown or not yet annotated
Domains [ 56 entries ]
ID
Region
Links
ProteinSmall nuclear ribonucleoprotein Sm D1
SpeciesHomo sapiens
P62314
2-81
UniProt
Representative domain 8029369Structure Viewer
Represented structures [ 98 ]
1B34
A:2-81
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D2
SpeciesHomo sapiens
P62316
26-118
UniProt
Representative domain 8029370Structure Viewer
Represented structures [ 98 ]
1B34
B:26-118
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein G
SpeciesHomo sapiens
P62308
10-72
UniProt
Representative domain 8063467Structure Viewer
Represented structures [ 97 ]
5XJQ
G:10-72
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein F
SpeciesHomo sapiens
P62306
2-75
UniProt
Representative domain 8063451Structure Viewer
Represented structures [ 95 ]
3PGW
I:2-75
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein E
SpeciesHomo sapiens
P62304
1-89
UniProt
Representative domain 8063475Structure Viewer
Represented structures [ 95 ]
3PGW
H:1-89
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D3
SpeciesHomo sapiens
P62318
4-75
UniProt
Representative domain 8029372Structure Viewer
Represented structures [ 78 ]
1D3B
A:4-75
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein F
SpeciesSaccharomyces cerevisiae S288C
P54999
19-86
UniProt
Representative domain 8031325Structure Viewer
Represented structures [ 76 ]
1N9R
A:19-86
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein-associated proteins B and B
SpeciesHomo sapiens
P14678
7-87
UniProt
Representative domain 8029368Structure Viewer
Represented structures [ 74 ]
1D3B
B:7-87
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein G
SpeciesSaccharomyces cerevisiae S288C
P40204
2-76
UniProt
Representative domain 8098667Structure Viewer
Represented structures [ 57 ]
6J6H
j:2-76
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D2
SpeciesSaccharomyces cerevisiae S288C
Q06217
17-108
UniProt
Representative domain 8063489Structure Viewer
Represented structures [ 55 ]
5ZWM
R:17-108
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein-associated protein B
SpeciesSaccharomyces cerevisiae S288C
P40018
6-102
UniProt
Representative domain 8077612Structure Viewer
Represented structures [ 55 ]
5WSG
F:6-102
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D1
SpeciesSaccharomyces cerevisiae S288C
Q02260
1-109
UniProt
Representative domain 8082630Structure Viewer
Represented structures [ 55 ]
3JCM
P:1-109
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D3
SpeciesSaccharomyces cerevisiae S288C
P43321
3-95
UniProt
Representative domain 8098693Structure Viewer
Represented structures [ 55 ]
6G90
d:3-95
PDBe
RCSB PDB
ProteinPutative snRNP Sm-like protein
SpeciesMethanothermobacter thermautotrophicus str. Delta H
O26745
8-81
UniProt
Representative domain 8031164Structure Viewer
Represented structures [ 48 ]
1MGQ
A:8-81
PDBe
RCSB PDB
ProteinPutative snRNP Sm-like protein
SpeciesArchaeoglobus fulgidus DSM 4304
O29386
3-74
UniProt
Representative domain 8021264Structure Viewer
Represented structures [ 41 ]
1I4K
A:3-74
PDBe
RCSB PDB
ProteinPutative snRNP Sm-like protein
SpeciesPyrococcus abyssi GE5
Q9V0Y8
3-73
UniProt
Representative domain 8030043Structure Viewer
Represented structures [ 41 ]
1H64
A:3-73
PDBe
RCSB PDB
ProteinPutative snRNP Sm-like protein
SpeciesMethanococcus vannielii SB
A6UPF5
2-72
UniProt
Representative domain 8063439Structure Viewer
Represented structures [ 41 ]
5MKI
H:2-72
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein homolog (Sm-like)
SpeciesPyrobaculum aerophilum str. IM2
Q8ZVU2
12-137
UniProt
Representative domain 8020311Structure Viewer
Represented structures [ 27 ]
1M5Q
A:12-137
PDBe
RCSB PDB
ProteinSm ribonucleo
SpeciesSulfolobus acidocaldarius
A0A0U3FHU0
4-82
UniProt
Representative domain 8063449Structure Viewer
Represented structures [ 27 ]
5MKL
A4:4-82
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm3
SpeciesSaccharomyces cerevisiae S288C
P57743
1-79
UniProt
Representative domain 8063445Structure Viewer
Represented structures [ 24 ]
4C8Q
C:1-79
PDBe
RCSB PDB
ProteinProbable U6 snRNA-associated Sm-like protein LSm3
SpeciesSchizosaccharomyces pombe 972h-
Q9Y7M4
9-93
UniProt
Representative domain 8063453Structure Viewer
Represented structures [ 19 ]
4EMG
A:9-93
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm5
SpeciesSaccharomyces cerevisiae S288C
P40089
6-84
UniProt
Representative domain 8063463Structure Viewer
Represented structures [ 18 ]
4M75
E:6-84
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm7
SpeciesSaccharomyces cerevisiae S288C
P53905
26-105
UniProt
Representative domain 8063497Structure Viewer
Represented structures [ 18 ]
4M7A
F:26-105
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm6
SpeciesSaccharomyces cerevisiae S288C
Q06406
10-86
UniProt
Representative domain 8099109Structure Viewer
Represented structures [ 16 ]
5VSU
F:10-86
PDBe
RCSB PDB
ProteinPutative snRNP Sm-like protein
SpeciesSaccharolobus solfataricus P2
Q97ZQ0
1-76
UniProt
Representative domain 8020150Structure Viewer
Represented structures [ 13 ]
1TH7
A:3-78
PDBe
RCSB PDB
ProteinPutative snRNP Sm-like protein
SpeciesPyrobaculum aerophilum str. IM2
Q8ZYG5
10-80
UniProt
Representative domain 8021402Structure Viewer
Represented structures [ 13 ]
1I8F
A:10-80
PDBe
RCSB PDB
ProteinRNA-binding protein Lsm
SpeciesHalobacterium salinarum R1
B0R5R2
1-60
UniProt
Representative domain 8102055Structure Viewer
Represented structures [ 13 ]
6TFL
M:1-60
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm6
SpeciesSchizosaccharomyces pombe 972h-
Q9UUI1
3-73
UniProt
Representative domain 8063459Structure Viewer
Represented structures [ 10 ]
3SWN
B:3-73
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm5
SpeciesSchizosaccharomyces pombe 972h-
O42978
6-77
UniProt
Representative domain 8063479Structure Viewer
Represented structures [ 10 ]
3SWN
S:6-77
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm6
SpeciesHomo sapiens
P62312
7-76
UniProt
Representative domain 8063441Structure Viewer
Represented structures [ 6 ]
3JCR
6:7-76
PDBe
RCSB PDB
ProteinLike-Sm ribonucleoprotein core
SpeciesSaccharolobus solfataricus 98/2
D0KRQ0
4-82
UniProt
Representative domain 8063447Structure Viewer
Represented structures [ 6 ]
4XQ3
D:4-82
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm3
SpeciesHomo sapiens
P62310
16-98
UniProt
Representative domain 8063455Structure Viewer
Represented structures [ 6 ]
3JCR
3:16-98
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm7
SpeciesHomo sapiens
Q9UK45
11-89
UniProt
Representative domain 8063465Structure Viewer
Represented structures [ 6 ]
3JCR
7:11-89
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm5
SpeciesHomo sapiens
Q9Y4Y9
10-85
UniProt
Representative domain 8063471Structure Viewer
Represented structures [ 6 ]
3JCR
5:10-85
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm4
SpeciesHomo sapiens
Q9Y4Z0
1-80
UniProt
Representative domain 8063487Structure Viewer
Represented structures [ 6 ]
3JCR
4:1-80
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm8
SpeciesHomo sapiens
O95777
4-73
UniProt
Representative domain 8063491Structure Viewer
Represented structures [ 6 ]
3JCR
8:4-73
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm2
SpeciesSchizosaccharomyces pombe 972h-
O94408
1-94
UniProt
Representative domain 8098249Structure Viewer
Represented structures [ 5 ]
6PPP
B:1-94
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm5 (Fragment)
SpeciesCryptosporidium parvum Iowa II
Q5CXX3
25-113
UniProt
Representative domain 8029052Structure Viewer
Represented structures [ 1 ]
3PGG
A:25-113
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein F
SpeciesSchizosaccharomyces pombe 972h-
O59734
4-78
UniProt
Representative domain 8063443Structure Viewer
Represented structures [ 1 ]
3JB9
I:4-78
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein G
SpeciesSchizosaccharomyces pombe 972h-
O74966
3-75
UniProt
Representative domain 8063461Structure Viewer
Represented structures [ 1 ]
3JB9
J:3-75
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein G
SpeciesMus musculus
P62309
7-74
UniProt
Representative domain 8063469Structure Viewer
Represented structures [ 1 ]
4F7U
G:5007-5074
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein E
SpeciesMus musculus
P62305
14-91
UniProt
Representative domain 8063477Structure Viewer
Represented structures [ 1 ]
4F7U
H:3014-3091
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D2
SpeciesSchizosaccharomyces pombe 972h-
O14036
19-115
UniProt
Representative domain 8063883Structure Viewer
Represented structures [ 1 ]
3JB9
G:19-115
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D3
SpeciesSchizosaccharomyces pombe 972h-
Q9UUC6
2-81
UniProt
Representative domain 8082632Structure Viewer
Represented structures [ 1 ]
3JB9
Z:2-81
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm1
SpeciesSchizosaccharomyces pombe 972h-
P87173
15-83
UniProt
Representative domain 8094197Structure Viewer
Represented structures [ 1 ]
6PPQ
A:15-83
PDBe
RCSB PDB
ProteinU6 snRNA-associated Sm-like protein LSm6
SpeciesSaccharomyces cerevisiae YJM789
A6ZYX7
10-84
UniProt
Representative domain 8097145Structure Viewer
Represented structures [ 1 ]
6ASO
F:10-84
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D1
SpeciesSchizosaccharomyces pombe 972h-
O42661
1-82
UniProt
Representative domain 8098159Structure Viewer
Represented structures [ 1 ]
3JB9
f:1-82
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D1
SpeciesMus musculus
P62315
1-82
UniProt
Representative domain 8098845Structure Viewer
Represented structures [ 1 ]
4F7U
A:1001-1082
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein F
SpeciesXenopus laevis
P62321
3-76
UniProt
Representative domain 8098847Structure Viewer
Represented structures [ 1 ]
4F7U
I:4003-4076
PDBe
RCSB PDB
ProteinSMB1 isoform 1
SpeciesSaccharomyces cerevisiae
A0A6A5Q0I3
6-102
UniProt
Representative domain 8102618Structure Viewer
Represented structures [ 1 ]
7DCO
h:6-102
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein Sm D3
SpeciesSaccharomyces cerevisiae
A0A6A5Q3H8
4-84
UniProt
Representative domain 8102624Structure Viewer
Represented structures [ 1 ]
7DCO
l:4-84
PDBe
RCSB PDB
ProteinSm protein F
SpeciesSaccharomyces cerevisiae
A0A6A5Q5K4
12-83
UniProt
Representative domain 8102626Structure Viewer
Represented structures [ 1 ]
7DCO
j:12-83
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein E
SpeciesSaccharomyces cerevisiae
A0A6A5Q895
10-92
UniProt
Representative domain 8102628Structure Viewer
Represented structures [ 1 ]
7DCO
i:10-92
PDBe
RCSB PDB
ProteinSnRNP, putative
SpeciesArchaeoglobus fulgidus DSM 4304
O29885
1-73
UniProt
Representative domain 8028942Structure Viewer
1LJO
A:3-75
PDBe
RCSB PDB
ProteinSmall nuclear ribonucleoprotein-associated protein
SpeciesHomo sapiens
Q66K91
6-91
UniProt
Representative domain 8102185Structure Viewer
7B0Y
j:6-91
PDBe
RCSB PDB
Protein
SpeciesSaccharomyces cerevisiae
A0A6L0ZK95
20-110
UniProt
Representative domain 8102634Structure Viewer
7DCO
c:20-110
PDBe
RCSB PDB