superfamilySARS coronavirus NSP9 RNA-replicase
domain
5YM6 A:1-105
SCOP ID: 8076497
Replicase polyprotein 1ab
Species Porcine coronavirus HKU15
UniProtX2G6C4
This domain
 
MAKNKSKRDA IALPENVPPP LQLFIHVAAA EEGHPKVTTY LGNYNLYATK APPGVQVLSA KTSLTDFENV FGAQPTLRSI RNLVCEARSA EWTISKNAFA LKATQLDYSD AVLRAMIRFC PPKVSTLAAF ALFGRLVKIE DKELAELARD TALELAYTAK IGTSLADTRS VSLIHKDAYL TLSNEVVGVT FTAALMAKAT TVNGAMQYSN FYLYPRATIK VTDGKAEAIA TKPLSAATKG KQITEDVNLL PDYQQLLVDQ VTGTEVKVGA LTYVKTTDSP PLYFPKVKGG VIGIALKQQG TAAKKLNVVF HAQPDDVLLA FIQLQQFLNR TSDSSVEITD CQSYEVSPTV TVKIGPSKPG DVIVATDEEY LKCFETPEVG RLYKVFQTQS WAIIERAFSS LKIRVSKALS AFISFLQNLA DNFTAISGVV TALIRELQDL TLDVATRITN IQFVYRAGKL IVDTTSVIAK LFQPFCDFIS PFLRKVAGFA IYTVGNRMLM FTSTGTFLLT KATTKILNKA KYIFDVEPEY PVDVTTSKVV VHEALQQTDT KPTRALEAVD VVVGNTVLQM ATDGTAFYPS DGTHASLPGF KAGSDELFIS FNCDLFDDET NAQINETLAA YELNQLVAPG DSTPRQIATL VVDTLADAIT DHFPEKTIDL PEDYQVFSDH DDLPLAQYHI PDHLSLYIQA MEGEDDSGDE ICIEDDDYDC PQADEDTEGV IPQQWELPDV DKFLLKIQER KTSSDEVLSV DVYPKPEPVG NVGIDDSASE KKPNGDSVPD PEVHPTLESV DVERPTETAN QAVEDKPSDT TFVVDEEQLQ ESTPEHELRS YEGEFDSDDE IIIPIVPVTP ADLKPQTITI KEYFKSEKLE TINEGSTESV TQSDDSFDES FVDAESDDPQ DPAVYDDTTI ITDSTDVGDE PETTLATIVN TPLTLDNNLP PEAIKQPSPT KVELVVGELA SIKFDNSVLV NPANAQLTNG GGAARAIAKL AGPKYQEYCN SVAPISGPLT TDSFDAKKFG VACILHVVPP KGSDPNVQEL LYQAYKSILT EPAHYVIPIL GAGIFGCNPV HSLDAFRKAC PSDIGRVTLV TMNKNHLQVW DALNRTIVRT TTDYDQVTTK ALTPQGVLEA NLFDGEDFVQ EPKPGQIYLE VTEEVQNQAK ELDLNLQQYC VYLKTCHHKW VVSRTNGLMH LKQKDNNCFV SAGVNLFQNT AYQLRPAIDA LYREYLNGNP NRFVAWIYAS TNRRVGEMGC PQQVISLLVS NSDAAFSATT ACCNTYFNHT GVISVAREYD PIQPKVYCMK CDVWTPFTPQ SGKGAVAIGI SADEPTGPAI KFAAAHCWYT NGKKTVNGYD TKANVVATYH RFDVPKPQLV EDVVALPTKN DFEVLNVEEL PQDSVLHLDP PPVQALQPKA NQHIEILENP DYLDILDLWI RKPKFILVKS WSVLGRALCK AGKVVFVSAS LLTRFYNYLV EIGALDSTIR LSVDLTCKFV RTVLPSSNTV HKTCLGLYYS AQTLFVSLAP FLMLPAVVSL LNSGYTIGTY LYAKTGWPCN YNATQHFDYN SYCAGDLVCQ ACFDGQDSLH LYPHLRVNQQ PLQTTDYTVY ALSLILLLAN MTLVMGTLIV TFFVNFYGVQ IPFYGTLLID YQSALVITFS VYYFYKVMKF FRHLTHGCKI PTCVVCAKLR TPPTITVETV VQGRKYPSVI ETNGGFTICK EHNFYCKDCS LQTPGTFIPT EAIESLSRAT RLSVKPTAPA FLLARDVECQ TDVVVARAMH NQNAHVCISK YSDIRTVDQL LKPTPLFSYT PDVIIAADFD NRGSLKTAKE LAVVLSMDLK RTIIIIDQAY SRPIDNYQEV ASRIEKYYPV AKITPTGDIF TDIKQATNGQ ASDSAINAAV LAVQRGLDFT IDNPNNILPH YAFDFSTLNA EDQSTILESG CAKGNLKGTN VGVVLSASLV TRLSQQAIRV IANAASRNGV TCAVTPSTLV MRGNIATQPL TRIKAGAPPM RQKILCVILA LAIVYFAAMA FGFLASQITL NTVPTIKSDI RASTFYVVRD GVLDTVRSND KCFANKFLAF DSFIQAPYTN SPDCPVVVGV VDVTTHSIPG IPAGVIHRDG LILNIYEQSL YETHQRQSMV RDALSLKTAN LFNLGKRVVV GYTQHEVVVG TSYFNSPALF NAKCTFLQYQ DTRQLYCYDT VPTEHKLYSD VLPHVEYKAI DINGDLVPFK IPEQIMFYPH IVRYTSNSYC RMGHCFNTNP GICISFTDEF PYSENVKPGV YCADTSLQLF SNLVLGTVSG IHIFTSTAAL LGSTIVIILC VVAVLAVQRF FKEYTTFVMY TCGLALVNIV GIALMYKCLV FAIFYYAIYL YFVLTFPSFK RNVALFYFAV VIVPHVSNMQ LLALIVCSII YFLYTYVHTV AKTAGKFSSF LDAAKATFVI DNEKYVLLKD LAGAEFDQYL ASYNKYKYFS GTASDKDYDK VCMAFLAKAL SSFREGGGSQ LYTPPKFAVV QSLKTKLQAG IKILLHPSGV VERCMVSVVY NGSALNGIWL KNVVYCPRHV IGKFRGDQWT HMVSIADCRD FIVKCPIQGI QLNVQSVKMV GALLQLTVHT NNTATPDYKF ERLQPGSSMT IACAYDGIVR HVYHVVLQLN NLIYASFLNG ACGSVGYTLK GKTLYLHYMH HIEFNNKTHS GTDLEGNFYG PYVDEEVIQQ QTAFQYYTDN VVAQLYAHLL TVDARPKWLA QSQISIEDFN SWAANNSFAN FPCEQTNMSY IMGLSQTARV PVERILNTII QLTTNRDGAC IMGSYDFECD WTPEMVYNQA PISLQSGVVK KTCTWFFHFL FMAITMLLAA MHVFPVHLYP IVLPCFTVVA FLLTLTIKHT VVFTTTYLLP SLLMMVVNAN TFWIPNTFLR TCYETIFGSP IAQRLYGYTV ALYMLIYAGL AINYTLKTLR YRATSFLSFC MQWFQYGYVA HIAYKLLNKP WTESLLFTAF TMLTSHPLLA ALSWWLAGRV TLPIIMPDLA IRVLAYNVIG YVICVRFGLM WLANRFTTVP MGTYQYMVSV EQLKYMMAVK MSPPRNAFEV LIANIRLLGL GGNRNIAVST VQNKILDAKA TAVVVANLLE KAGVTNKHAI CKKIVKLHND TLKATTYEEV EVALVKLLSH IIEFLPTDQV DAYLADAANA QHVNTYFDNL LENKAVVQAV ADININLDSY RIYKEADAIY KRSVEMNESP QEQKKKLKAV NIAKAEWERE AASQRKLEKL ADAAMKSMYL AERAEDRRIK LTSGLTAMLY HMLRRLDSDR VKALFECAKA QILPIHAVVG ISNDNLKVIF NDKDSYSHYV EGNTLIHKGV RYTIVKKLSL DNAPIEGVPE EFPVVVETVR EGVPQLQNNE LCLRNVFTAQ NTAQDFNGNE STVKSFYVTR TGKKILVAIT STKDNLKTVT CLTETGKTVL NLDPPMRFAH TVGGKQSVVY LYFIQNISSL NRGMVIGHIS ETTILQASGT QIEYQQNASL LTYLAFAVDP KTAYLKHLAD GGSPIQGCIQ MIATMGPGFA VTTKPQPNEH QYSYGGASIC LYCRAHIPHP GVDGRCPYKG RFVHIDKDKE PVSFALTHEP CSSCQRWVNY DCTCGSSLQN SAYLNRVTGS SDARLEPLQP GTQPDAVKRA FHVHNDTTSG IFLSTKSNCA RFKTTRSALP LPNKGEVELY FVTKQCAAKV FEIEEECYNA LSTELYTTDD TFGVLAKTEF FKFDKIPNVN RQYLTKYTLL DLAYALRHLS TSKDVIQEIL ITMCGTPEDW FGENWFDPIE NPSFYKEFHK LGDILNRCVL NANKFASACI DAGLVGILTP DNQDLLGQIY DFGDFIITQP GNGCVDLASY YSYLMPIMSM THMLKCECMD SDGNPLEYDG FQYDFTDFKL GLFEKYFKYW DRPYHPNTVE CPDDRCVLHC ANFNVLFAMC IPNTAFGNLC SRATVDGHLV VQTVGVHLKE LGIVLNQDVT THMANINLNT LLRLVGDPTT IASVSDKCVD LRTPCQTLAT MSSGIAKQSV KPGHFNQHFY KHLLDSNLLD QLGIDIRHFY YMQDGEAAIT DYSYYRYNTP TMVDIKMFLF CLEVADKYLE PYEGGCINAQ SVVVSNLDKS AGYPFNKLGK ARNYYDMTHA EQNQLFEYTK RNVLPTLTQM NLKYAISAKD RARTVAGVSI ISTMTNRQYH QKMLKSISLA RNQTIVIGTT KFYGGWDNML RRLMCNINNP ILVGWDYPKC DRSMPNMLRI AASCLLARKH TCCNQSQRFY RLANECCQVL SEVVVSGNNL YVKPGGTSSG DATTAYANSV FNILQVVSAN VATFLSTSTT THLNKDIADL HRSLYEDIYR GDSNDITVIN RFYQHLQSYF GLMILSDDGV ACIDSAVAKA GAVADLDGFR DILFYQNNVY MADSKCWTET DMNVGPHEFC SQHTVLAEHD GKPYYLPYPD VSRILGACIF VDDVNKADPV QNLERYISLA IDAYPLTKVD PIKGKVFYLL LDYIRVLAQE LQDGILDAFQ SLTDMSYVNN FMNEAFYAQM YEQSPTLQAS GVCVVCNSPT ILRCGDCIRR PLLCCVCAYQ HVTQTTHKRI IAINNYICSV ENCNEDNVEK LFISGTAIYC ENHKPTLCIP IVANGSVFGI YRHTARGSDD IDLFNELATS NYDTIEPYQK ANRAPLSLML FAAETIKALE ESIKKSYATA TVKDVYDQRF IKLLWEQGKK PPPITKNHIF TGYHFNKNGK TQVGDYILAK TDGSDTYTYR GTSTYKLQTG DVLVLMAHVV TPLSAPPVLT QTTYVRKSLL PDSVGASYYV QHFKSYNEIA MQRVTTVLGP PGTGKSTFAI GLAKYFPSAR ICYTASSHAA IDALCEKAFK TIPVGQCSRI VPTRTTVECF QEFVVNNTTA QYIFSTINAL PDIKCDIVVV DEVSMLTNYE LSSVNARLVY NHIVYVGDPY QLPSPRTMLT SGQLSPADYN VVTDIMVHAG ADVMLDMCYR CPREIVETVS KLVYDNKLKA AKPNSRQCYK TIVNFGPGDV AHEGQSAYNE AQLRFALAFR QQKRWDNVTF ISPYNAMNVK ASLAGFSTQT VDSSQGSEYD YVIFCVTTDS AHALNMARLN VALTRAKIGI LVVFRQANEL YNSLQFESID SQLQSSAEKN LTPLFKRCGY EYNGVHPAHA LTWHDCGAEY RCEEPLAKLV GVADGTLISY KTLVSTLGFL PSLKIDAYHN MFLTRDACRT YVQSWIGIDV EAAHAIKPNT GTNLPLQIGF STGKNFSVTP EGIWVNEHGS CTEPVPAKIP PGEQFRHLKK DMRQARPWKV VRREIATHIA EVAPHTDYIC FVTWAHQLEL ATMRYFVKLG MEEKCFCGRR ACFTNGTEFA CKAHHSLTIP QCDYVYNPFL IDVATWGFSG RLSTNHDAVC TYHANAHVAS ADAIMTVCLA IHELFSTVDW NFEFPVTAEQ SQLNKACRLV QANYLNILLT TTKATVVHDI GNPKGIPIVR KPGVKYHFYD QAPIVKHVQK LKYKPEMEAR FTDGLTMFWN CNVDTYPANA LVCRYDTHRQ KHLIGPNGSA LYVNKHAFLT PEMHTYATHK LNLAPLIYYS TTDCSSEQPI VVTYRDCVTR CNTGKTLCPN HALEYQEFIN AYNLMARHGF NVYIPRNVNV YNCWLTFTNL QNLENLAYNC YYKNCNAHVD GQLDVVINNN AVYAKVDNNL VKLFDNRTNL PVSVAFEHYT NRHTRSLPTT QLLSGLGVTA TRNFTVWFDN DTIFQYTINV STYTDIDPST HVVLCDDRYG TDWSQFNQLP NAVFLTKTKV KKTEPFVCTA LTLNGVAIDG EELYIYVRYN NQLTTFATTC TQGRNVEQFI PKTPMERDFL EMSQQSFIQQ HQLQELGVEH IIYGDDSSPV IGGTHTLISL VKNKFEHQLV NHVYNPVQNC VVTSPNASSK NVCTVLDVLL DDYIDIIRQA HASYTSKSKV FTVSIDNQQI RFMLWHDEQV KTCYPILQSL TNGYQMPSVY KTLVTDLQPA DIPNYHSYTP RVPGVVKNVI KYRQLFNYIV KKDRLAVPHN MTVLHLGAAS ALGTAPGSSV IKQMFPEGTV LIDLDIREFT SDANQIIVTD YRTYIPPHHV DVIFSDLYCC DDIHFFDNLI RIVKERLALG GSIFVKITEH SFSPELYSLA GWFDDYQLFC TAVNASSSEA FLCCFNYLGL AKENINGFNL HASYIQWRNE IALTPTYSPL ADNPATACKL KATPIISARE LEKKPILRYL VASGRLLVRP PECRELY
  Domain only
  Domain in chain
  Domain in PDB