Uniprot accession / id : E9Q4K7  OR   Uniprot accession / id : Q9NQT8
 
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Entry Information
Entry status  (1)
REL
(5)
 
Experimental methods  (2)
X-ray diffraction
(4)
Solution NMR
(1)
 
Authors  (28)
Arrowsmith CH
(3)
Bochkarev A
(3)
Bountra C
(3)
Edwards AM
(3)
Park H
(3)
Shen L
(3)
Structural Genomics Consortium (SGC)
(3)
Tempel W
(3)
Tong Y
(3)
Weigelt J
(3)
MacKenzie F
(2)
Chishti AH
(1)
Inoue M
(1)
Kigawa T
(1)
Koshiba S
(1)
Park HW
(1)
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(1)
Saito K
(1)
Senisterra GA
(1)
Shang Y
(1)
Shen Y
(1)
Wang H
(1)
Xia Y
(1)
Yamada K
(1)
Yokoyama S
(1)
Zhang M
(1)
Zhang R
(1)
Zhu J
(1)
 
Homo / hetero assembly  (2)
hetero
(3)
homo
(2)
 
Assembly composition  (2)
protein/protein complex
(3)
protein structure
(2)
 
Assembly polymer count  (2)
dimer
(3)
monomer
(2)
 
Resolution distribution
2.0 - 2.5
(2)
2.5 - 3
(2)
 
Release year distribution
2000 - 2005
(1)
2005 - 2010
(4)
2010 - 2015
(1)
2015 - 2020
(1)
 
Journal  (3)
To be published
(3)
Proc Natl Acad Sci U S A
(1)
Structure
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(5)
 
Organism name  (2)
Homo sapiens
(4)
Mus musculus
(1)
 
Molecule name  (3)
Kinesin-like protein GAKIN
(4)
Kinesin-like protein KIF13B
(4)
Kinesin family member 13B
(1)
 
Molecule type  (1)
Protein
(5)
 
Gene names  (4)
GAKIN
(4)
KIAA0639
(4)
KIF13B
(4)
Kif13b
(1)
 
Interacting Molecules  (2)
Arf-GAP with dual PH domain-containing protein 1
(2)
Disks large homolog 4
(1)
 
Interacting ligands  (3)
ADP : ADENOSINE-5'-DIPHOSPHATE
(1)
MG : MAGNESIUM ION
(1)
SO4 : SULFATE ION
(1)
 
Function and Biology
Biological function  (3)
ATP binding
(1)
microtubule binding
(1)
microtubule motor activity
(1)
 
Biological process  (1)
microtubule-based movement
(1)
 
Biological cell component  (1)
cell-cell junction
(2)
 
Sequence and Structure classification
SCOP fold  (1)
SH3-like barrel
(1)
 
SCOP family  (1)
Cap-Gly domain
(1)
 
CATH class  (2)
Mainly Beta
(3)
Alpha Beta
(1)
 
CATH topology  (3)
Tumour Suppressor Smad4
(2)
Kinesin
(1)
SH3 type barrels.
(1)
 
Pfam accession / name  (5)
PF00498 : FHA
(2)
PF16183 : Kinesin_assoc
(2)
PF00225 : Kinesin
(1)
PF01302 : CAP_GLY
(1)
PF12423 : KIF1B
(1)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(4)
 
Diffraction radiation source type  (1)
Synchrotron
(4)
 
Diffraction source  (3)
APS BEAMLINE 19-ID
(2)
APS BEAMLINE 23-ID-B
(1)
SSRF BEAMLINE BL17U
(1)
 
Synchrotron site  (2)
APS
(3)
SSRF
(1)
 
Diffraction detector type  (1)
CCD
(4)
 
Refinement software  (2)
PHENIX
(2)
REFMAC
(2)
 
NMR
NMR software packages  (4)
CNS
(1)
NMRPipe
(1)
NMRView
(1)
XwinNMR
(1)
 
NMR Field Strength
700.0 - 800
(1)
800.0 - 900
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 5 of 5
Entries 1 to 5 of 5
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A novel binding mode of MAGUK GK domain revealed by DLG GK domain in complex with KIF13B MBS domain
Shang Y, Zhu J, Zhang M
Structure (2016) [PMID: 27642159  ]
Source organisms: Rattus  , Mus musculus  
Assembly composition: protein/protein complex
Bound ligands: GOL    SO4   
Assembly name: Disks large homolog 4 and Kinesin family member 13B (Preferred)   search this complex
PDBe complex ID: PDB-CPX-123218 (Preferred)   search this ID
PDBe-KB: E9Q4K7    P31016   
X-ray diffraction
2.7Å resolution
Released: 12 Oct 2016
Model geometry
Fit model/data
5b64
5b64
5b64
Crystal structure of the motor domain of kinesin KIF13B bound with ADP
Tong Y, Shen L, Shen Y, Tempel W, Arrowsmith CH, Edwards AM, Bountra C, Weigelt J, Bochkarev A, Park H, Structural Genomics Consortium (SGC)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: MG    ADP    ADP    MG   
Assembly name: Kinesin-like protein KIF13B (Preferred)   search this complex
PDBe complex ID: PDB-CPX-192513 (Preferred)   search this ID
PDBe-KB: Q9NQT8   
X-ray diffraction
2.102Å resolution
Released: 3 Mar 2009
Model geometry
Fit model/data
3gbj
3gbj
3gbj
Crystal structure of full length centaurin alpha-1 bound with the FHA domain of KIF13B (CAPRI target)
Shen L, Tong Y, Tempel W, MacKenzie F, Arrowsmith CH, Edwards AM, Bountra C, Weigelt J, Bochkarev A, Park H, Structural Genomics Consortium (SGC)
Proc Natl Acad Sci U S A (2010) [PMID: 21057110  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: ZN    SO4    ZN   
Assembly name: Arf-GAP with dual PH domain-containing protein 1 and Kinesin-like protein KIF13B (Preferred)   search this complex
PDBe complex ID: PDB-CPX-131098 (Preferred)   search this ID
PDBe-KB: Q9NQT8    O75689   
X-ray diffraction
2.3Å resolution
Released: 25 Aug 2009
Model geometry
Fit model/data
3fm8
3fm8
3fm8
Solution structure of the CAP-Gly domain in human Kinesin-like protein KIF13B
Saito K, Koshiba S, Inoue M, Kigawa T, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Kinesin-like protein KIF13B (Preferred)   search this complex
PDBe complex ID: PDB-CPX-192513 (Preferred)   search this ID
PDBe-KB: Q9NQT8   
Solution NMR
Released: 19 Nov 2005
Model geometry
Fit model/data
Data not deposited
2cow
2cow
2cow
Crystal structure of the ternary complex of full length centaurin alpha-1, KIF13B FHA domain, and IP4
Shen L, Tong Y, Tempel W, MacKenzie F, Arrowsmith CH, Edwards AM, Bountra C, Weigelt J, Bochkarev A, Park H, Structural Genomics Consortium (SGC)
To be published
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: ZN    ZN    IP9    IP9   
Assembly name: Arf-GAP with dual PH domain-containing protein 1 and Kinesin-like protein KIF13B (Preferred)   search this complex
PDBe complex ID: PDB-CPX-131098 (Preferred)   search this ID
PDBe-KB: Q9NQT8    O75689   
X-ray diffraction
2.952Å resolution
Released: 4 Aug 2010
Model geometry
Fit model/data
3mdb
3mdb
3mdb
Entries 1 to 5 of 5
Entries 1 to 5 of 5