Filter by :
Entry Information
Entry status
(1)
Experimental methods
(2)
X-ray diffraction
(12)
Solution NMR
(1)
Authors
(69)
Futami J
(5)
Seno M
(5)
Tada H
(5)
Yamada H
(5)
Fujiki S
(4)
Hirata T
(4)
Honjo E
(4)
Ino T
(4)
Kosaka M
(4)
Kuroki R
(4)
Miyata K
(4)
Moriya M
(4)
Nomoto T
(4)
Tamada T
(4)
Tano M
(4)
Yamaguchi H
(4)
Yamanishi M
(4)
Yoshimura M
(4)
Bingman CA
(3)
Coll M
(3)
Phillips GN
(3)
Phillips Jr GN
(3)
Pous J
(3)
Raines RT
(3)
Benito A
(2)
Canals A
(2)
Center for Eukaryotic Structural Genomics (CESG)
(2)
Guasch A
(2)
Johnson RJ
(2)
Mazzarella L
(2)
McCoy JG
(2)
Merlino A
(2)
Ribo M
(2)
Ribó M
(2)
Sica F
(2)
Terzyan SS
(2)
Vilanova M
(2)
Wesenberg GE
(2)
Allard STM
(1)
Arciello A
(1)
Avella G
(1)
Batta G
(1)
Bianchetti CM
(1)
Bitto E
(1)
Bruix M
(1)
Buell AK
(1)
Chang A
(1)
D'Alessio G
(1)
De Llorens R
(1)
Di Gaetano S
(1)
Fox BG
(1)
Gomis-Ruth FX
(1)
Gomis-Rüth FX
(1)
Knowles TP
(1)
Kondrashov DA
(1)
Kover KE
(1)
Kövér KE
(1)
Laurents DV
(1)
Levin EJ
(1)
Lomax JE
(1)
Mallorqui-Fernandez G
(1)
Mallorquí-Fernández G
(1)
Peracaula R
(1)
Pica A
(1)
Piccoli R
(1)
Pizzo E
(1)
Rico M
(1)
Santoro J
(1)
de Llorens R
(1)
Homo / hetero assembly
(2)
homo
(10)
hetero
(3)
Assembly composition
(2)
protein structure
(10)
protein/protein complex
(3)
Assembly polymer count
(3)
monomer
(7)
dimer
(4)
tetramer
(2)
Resolution distribution
1.5 - 2
(9)
2.0 - 2.5
(1)
2.5 - 3
(2)
Release year distribution
2000 - 2005
(4)
2005 - 2010
(8)
2010 - 2015
(2)
Journal
(4)
J Mol Biol
(5)
Protein Sci
(5)
Acta Crystallogr D Biol Crystallogr
(2)
Structure
(1)
Macromolecules
Organism superkingdom
(1)
Eukaryota
(13)
Organism name
(2)
Homo sapiens
(12)
Mus musculus
(1)
Molecule name
(8)
RNase 1
(13)
RNase A
(13)
Ribonuclease pancreatic
(13)
HP-RNase
(12)
RIB-1
(12)
RNase UpI-1
(12)
Ribonuclease 1
(12)
Ribonuclease A
(12)
Molecule type
(1)
Protein
(13)
Gene names
(7)
RIB1
(12)
RNASE1
(12)
RNS1
(12)
Rib-1
(1)
Rib1
(1)
Rnase1
(1)
Rns1
(1)
Interacting Molecules
(1)
Ribonuclease inhibitor
(3)
Interacting ligands
(6)
CL : CHLORIDE ION
(3)
SO4 : SULFATE ION
(3)
CD : CADMIUM ION
(2)
CIT : CITRIC ACID
(2)
GOL : GLYCEROL
(1)
NA : SODIUM ION
(1)
Function and Biology
EC number / name
(1)
4.6.1.18 : Pancreatic ribonuclease
(13)
Biological function
(8)
nucleic acid binding
(13)
endonuclease activity
(12)
hydrolase activity
(12)
lyase activity
(12)
nuclease activity
(12)
ribonuclease A activity
(12)
RNA nuclease activity
(11)
protein binding
(11)
Biological process
(3)
defense response to Gram-positive bacterium
(11)
defense response to virus
(11)
response to bacterium
(1)
Biological cell component
(2)
extracellular region
(12)
extracellular exosome
(11)
Sequence and Structure classification
SCOP fold
(1)
RNase A-like
(6)
SCOP family
(1)
Ribonuclease A-like
(6)
CATH class
(1)
Alpha Beta
(13)
CATH topology
(1)
P-30 Protein
(13)
Pfam accession / name
(1)
PF00074 : RnaseA
(13)
Experimental Information
Diffraction protocol
(1)
Single wavelength
(12)
Diffraction radiation source type
(2)
Synchrotron
(10)
Rotating anode
(1)
Diffraction source
(7)
SPRING-8 BEAMLINE BL38B1
(4)
ELETTRA BEAMLINE 5.2R
(2)
APS BEAMLINE 21-ID-D
(1)
APS BEAMLINE 22-ID
(1)
EMBL/DESY, HAMBURG BEAMLINE BW7A
(1)
ESRF BEAMLINE ID14-2
(1)
RIGAKU RU200
(1)
Synchrotron site
(5)
SPring-8
(4)
APS
(2)
ELETTRA
(2)
EMBL/DESY, Hamburg
(1)
ESRF
(1)
Diffraction detector type
(2)
CCD
(9)
Image plate
(2)
Refinement software
(4)
REFMAC
(7)
CNS
(4)
CCP4
(1)
PHENIX
(1)
NMR
NMR software packages
(3)
CYANA
(1)
XEASY
(1)
XwinNMR
(1)
NMR Field Strength
500.0 - 600
(1)
600.0 - 700
(1)
Representative Structures
Representative Structures
Entries
Macromolecules
Compounds
Protein families
Entries 1 to 10 of 13
Select all entries on this page
Ensemble refinement of the protein crystal structure of human ribonuclease inhibitor complexed with ribonuclease I
Levin EJ, Kondrashov DA, Wesenberg GE, Phillips Jr GN, Center for Eukaryotic Structural Genomics (CESG)
J Mol Biol
(2007)
[PMID: 17350650 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
CIT
Assembly name:
Ribonuclease pancreatic and Ribonuclease inhibitor
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139882 (Preferred)
search this ID
Mutant Human Ribonuclease 1 (V52L, D53L, N56L, F59L)
Yamada H, Tamada T, Kosaka M, Kuroki R
Protein Sci
(2007)
[PMID: 17586772 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139880 (Preferred)
search this ID

Mutant Human Ribonuclease 1 (Q28L, R31L, R32L)
Yamada H, Tamada T, Kosaka M, Kuroki R
Protein Sci
(2007)
[PMID: 17586772 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139880 (Preferred)
search this ID

Domain-swapped Dimer of a Human Pancreatic Ribonuclease Variant
Canals A, Pous J, Guasch A, Benito A, Ribo M, Vilanova M, Coll M
Structure
(2001)
[PMID: 11591351 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139881 (Preferred)
search this ID

3-D structure of a HP-RNase
Pous J, Canals A, Terzyan SS, Guasch A, Benito A, Ribo M, Vilanova M, Coll M
J Mol Biol
(2000)
[PMID: 11021969 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139880 (Preferred)
search this ID

Ribonuclease 1 des1-7 Crystal Structure at 1.9A
Pous J, Mallorqui-Fernandez G, Peracaula R, Terzyan SS, Futami J, Tada H, Yamada H, Seno M, De Llorens R, Gomis-Ruth FX, Coll M
Acta Crystallogr D Biol Crystallogr
(2001)
[PMID: 11264578 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139880 (Preferred)
search this ID

X-ray structure of mouse ribonuclease inhibitor complexed with mouse ribonuclease 1
Chang A, Lomax JE, Bingman CA, Raines RT, Phillips Jr GN
J Mol Biol
(2014)
[PMID: 24941155 ]
Source organism: Mus musculus
Assembly composition: protein/protein complex
Assembly name:
Ribonuclease pancreatic and Ribonuclease inhibitor
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-132820 (Preferred)
search this ID
The X-ray structure of a dimeric variant of human pancreatic ribonuclease with high cytotoxic and antitumor activities
Merlino A, Avella G, Mazzarella L, Sica F
Protein Sci
(2009)
[PMID: 19177350 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Bound ligands:
SO4
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139881 (Preferred)
search this ID

Mutant Human Ribonuclease 1 (T24L, Q28L, R31L, R32L)
Yamada H, Tamada T, Kosaka M, Kuroki R
Protein Sci
(2007)
[PMID: 17586772 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139880 (Preferred)
search this ID

Mutant Human Ribonuclease 1 (R31L, R32L)
Yamada H, Tamada T, Kosaka M, Kuroki R
Protein Sci
(2007)
[PMID: 17586772 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Ribonuclease pancreatic
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-139880 (Preferred)
search this ID

Entries 1 to 10 of 13