Uniprot accession / id : (P04141)
 
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Entry Information
Entry status  (1)
REL
(10)
 
Experimental methods  (1)
X-ray diffraction
(10)
 
Authors  (40)
Augustin M
(4)
Boettcher J
(4)
Bottcher J
(4)
Broughton SE
(4)
Böttcher J
(4)
Dhagat U
(4)
Eylenstein R
(4)
Hartle S
(4)
Hercus TR
(4)
Härtle S
(4)
Lopez AF
(4)
McClure BJ
(4)
Nero TL
(4)
Ostendorp R
(4)
Parker MW
(4)
Steidl S
(4)
Strohner R
(4)
Weinfurtner D
(4)
Barry EF
(2)
Bryson S
(2)
Cheung Tung Shing KS
(2)
Dottore M
(2)
Gorman MA
(2)
King-Scott J
(2)
Pai EF
(2)
Schrader JW
(2)
Taing H
(2)
Thomson CA
(2)
Boone T
(1)
Bugg CE
(1)
Cook WJ
(1)
Diederichs K
(1)
Ealick SE
(1)
Hecht R
(1)
Karplus PA
(1)
Nagabhushan TL
(1)
Rozwarski D
(1)
Rozwarski DA
(1)
Trotta PP
(1)
Walter MR
(1)
 
Homo / hetero assembly  (2)
hetero
(8)
homo
(2)
 
Assembly composition  (2)
protein/protein complex
(8)
protein structure
(2)
 
Assembly polymer count  (3)
trimer
(7)
dimer
(2)
monomer
(1)
 
Resolution distribution
1.5 - 2
(1)
2.0 - 2.5
(3)
2.5 - 3
(5)
3.0 - 3.5
(1)
 
Release year distribution
1990 - 1995
(1)
1995 - 2000
(1)
2010 - 2015
(6)
2015 - 2020
(8)
 
Journal  (4)
MAbs
(6)
Structure
(2)
J Mol Biol
(1)
Proteins
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(10)
 
Organism name  (1)
Homo sapiens
(10)
 
Molecule name  (14)
CSF
(10)
Colony-stimulating factor
(10)
GM-CSF
(10)
Granulocyte-macrophage colony-stimulating factor
(10)
Molgramostin
(10)
Sargramostim
(10)
CDw116
(2)
GM-CSF-R-alpha
(2)
GMCSFR-alpha
(2)
GMR-alpha
(2)
Granulocyte-macrophage colony-stimulating factor receptor subunit alpha
(2)
CDw131
(1)
Cytokine receptor common subunit beta
(1)
GM-CSF/IL-3/IL-5 receptor common beta subunit
(1)
 
Molecule type  (1)
Protein
(10)
 
Gene names  (8)
CSF2
(10)
GMCSF
(10)
CSF2R
(2)
CSF2RA
(2)
CSF2RY
(2)
CSF2RB
(1)
IL3RB
(1)
IL5RB
(1)
 
Interacting Molecules  (9)
Immunglobulin G1 Fab fragment, heavy chain
(4)
Immunglobulin G1 Fab fragment, light chain
(4)
Granulocyte-macrophage colony-stimulating factor
(2)
Granulocyte-macrophage colony-stimulating factor receptor subunit alpha
(2)
Cytokine receptor common subunit beta
(1)
Fab Heavy Chain
(1)
Fab Heavy chain
(1)
Fab Light Chain
(1)
Fab light Chain
(1)
 
Interacting ligands  (3)
NAG : 2-acetamido-2-deoxy-beta-D-glucopyranose
(2)
GOL : GLYCEROL
(1)
PGE : TRIETHYLENE GLYCOL
(1)
 
Function and Biology
Biological function  (5)
granulocyte macrophage colony-stimulating factor receptor binding
(10)
growth factor activity
(10)
cytokine activity
(7)
protein binding
(7)
cytokine receptor activity
(2)
 
Biological process  (30)
immune response
(10)
cell population proliferation
(7)
cell surface receptor signaling pathway via JAK-STAT
(7)
cell surface receptor signaling pathway via STAT
(7)
cellular response to granulocyte macrophage colony-stimulating factor stimulus
(7)
cellular response to lipopolysaccharide
(7)
dendritic cell differentiation
(7)
embryonic placenta development
(7)
epithelial fluid transport
(7)
granulocyte-macrophage colony-stimulating factor signaling pathway
(7)
histamine secretion
(7)
macrophage differentiation
(7)
monocyte differentiation
(7)
myeloid cell differentiation
(7)
myeloid dendritic cell differentiation
(7)
negative regulation of DNA-templated transcription
(7)
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
(7)
neutrophil differentiation
(7)
positive regulation of cell migration
(7)
positive regulation of cell population proliferation
(7)
positive regulation of gene expression
(7)
positive regulation of interleukin-23 production
(7)
positive regulation of leukocyte proliferation
(7)
positive regulation of macrophage derived foam cell differentiation
(7)
positive regulation of podosome assembly
(7)
regulation of cell population proliferation
(7)
regulation of circadian sleep/wake cycle, sleep
(7)
regulation of gene expression
(7)
response to fluid shear stress
(7)
response to silicon dioxide
(7)
 
Biological cell component  (6)
extracellular region
(10)
extracellular space
(7)
granulocyte macrophage colony-stimulating factor receptor complex
(7)
intracellular membrane-bounded organelle
(7)
plasma membrane
(7)
membrane
(2)
 
Sequence and Structure classification
SCOP fold  (1)
4-helical cytokines
(2)
 
SCOP family  (1)
Short-chain cytokines
(2)
 
CATH class  (2)
Mainly Alpha
(10)
Mainly Beta
(1)
 
CATH topology  (2)
Growth Hormone; Chain: A;
(10)
Immunoglobulin-like
(1)
 
Pfam accession / name  (4)
PF01109 : GM_CSF
(10)
PF09240 : IL6Ra-bind
(2)
PF18611 : IL3Ra_N
(1)
PF21460 : IL3Rb_N
(1)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(8)
 
Diffraction radiation source type  (1)
Synchrotron
(8)
 
Diffraction source  (4)
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
(3)
SLS BEAMLINE X06SA
(3)
APS BEAMLINE 19-BM
(1)
SLS BEAMLINE X06DA
(1)
 
Synchrotron site  (3)
SLS
(4)
Australian Synchrotron
(3)
APS
(1)
 
Diffraction detector type  (2)
CCD
(4)
Pixel
(4)
 
Representative Structures
Representative Structures
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Entries 1 to 10 of 10
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Structure of a Cytokine Receptor Complex
Parker MW, Broughton SE
Structure (2016) [PMID: 27396825  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: NAG    NAG   
PDBe complex ID: PDB-CPX-137430 (Preferred)   search this ID
PDBe-KB: P32927    P15509    P04141   
X-ray diffraction
3.301Å resolution
Released: 23 Sep 2015
Model geometry
Fit model/data
4nkq
4nkq
4nkq
Crystal structure of receptor-cytokine complex
Broughton SE, Parker MW, Dhagat U
Structure (2016) [PMID: 27396825  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: GOL    NAG    NAG   
Assembly name: Granulocyte-macrophage colony-stimulating factor and Granulocyte-macrophage colony-stimulating factor receptor subunit alpha (Preferred)   search this complex
PDBe complex ID: PDB-CPX-137429 (Preferred)   search this ID
PDBe-KB: P15509    P15509    P04141   
X-ray diffraction
2.68Å resolution
Released: 11 Nov 2015
Model geometry
Fit model/data
4rs1
4rs1
4rs1
Crystal structure of MOR04252, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
Eylenstein R, Weinfurtner D, Steidl S, Boettcher J, Augustin M
MAbs (2016) [PMID: 26406987  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: PEG    PEG   
Assembly name: Granulocyte-macrophage colony-stimulating factor and IG-heavy chain and IG-light lambda chain (Preferred)   search this complex
PDBe complex ID: PDB-CPX-208982 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2.6Å resolution
Released: 14 Oct 2015
Model geometry
Fit model/data
5d72
5d72
5d72
Crystal structure of MOR04302, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
Eylenstein R, Weinfurtner D, Steidl S, Boettcher J, Augustin M
MAbs (2016) [PMID: 26406987  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: PEG    PEG    SO4   
Assembly name: Granulocyte-macrophage colony-stimulating factor and IG-heavy chain and IG-light lambda chain (Preferred)   search this complex
PDBe complex ID: PDB-CPX-208981 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2.25Å resolution
Released: 14 Oct 2015
Model geometry
Fit model/data
5d71
5d71
5d71
Three-dimensional structure of recombinant human granulocyte-macrophage colony-stimulating factor
Walter MR, Cook WJ, Ealick SE
J Mol Biol (1992) [PMID: 1569568  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Granulocyte-macrophage colony-stimulating factor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-137437 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2.7Å resolution
Released: 31 Oct 1993
Model geometry
Fit model/data
Data not deposited
1csg
1csg
1csg
HUMAN GRANULOCYTE MACROPHAGE COLONY STIMULATING FACTOR
Rozwarski D, Diederichs K, Hecht R, Boone T, Karplus PA
Proteins (1996) [PMID: 8953651  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Granulocyte-macrophage colony-stimulating factor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-137428 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2.4Å resolution
Released: 8 Nov 1996
Model geometry
Fit model/data
2gmf
2gmf
2gmf
The mechanism of GM-CSF inhibition by human GM-CSF auto-antibodies
Dhagat U, Hercus TR, Broughton SE, Nero TL, Lopez AF, Parker MW
MAbs (2018) [PMID: 29969365  ]
Assembly composition: protein/protein complex
Assembly name: Granulocyte-macrophage colony-stimulating factor and IG-light kappa chain and IG-heavy chain (Preferred)   search this complex
PDBe complex ID: PDB-CPX-230782 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2Å resolution
Released: 12 Sep 2018
Model geometry
Fit model/data
6bfs
6bfs
6bfs
Crystal structure of MOR03929, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
Eylenstein R, Weinfurtner D, Steidl S, Boettcher J, Augustin M
MAbs (2016) [PMID: 26406987  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: SO4   
Assembly name: Granulocyte-macrophage colony-stimulating factor and IG-heavy chain and IG-light lambda chain (Preferred)   search this complex
PDBe complex ID: PDB-CPX-208980 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2.06Å resolution
Released: 14 Oct 2015
Model geometry
Fit model/data
5d70
5d70
5d70
The mechanism of GM-CSF inhibition by human GM-CSF auto-antibodies
Dhagat U, Hercus TR, Broughton SE, Nero TL, Lopez AF, Parker MW
MAbs (2018) [PMID: 29969365  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Assembly name: Granulocyte-macrophage colony-stimulating factor and IG-heavy chain and IG-light kappa chain (Preferred)   search this complex
PDBe complex ID: PDB-CPX-230781 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2.6Å resolution
Released: 12 Sep 2018
Model geometry
Fit model/data
6bfq
6bfq
6bfq
Crystal structure of MOR04357, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
Eylenstein R, Weinfurtner D, Steidl S, Boettcher J, Augustin M
MAbs (2016) [PMID: 26406987  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: PEG    PEG    PG6    PG6    PGE    PGE   
Assembly name: Granulocyte-macrophage colony-stimulating factor and IG-heavy chain and IG-light lambda chain (Preferred)   search this complex
PDBe complex ID: PDB-CPX-208979 (Preferred)   search this ID
PDBe-KB: P04141   
X-ray diffraction
2.95Å resolution
Released: 14 Oct 2015
Model geometry
Fit model/data
5c7x
5c7x
5c7x
Entries 1 to 10 of 10
Entries 1 to 10 of 10