Uniprot accession / id : P09920  OR   Uniprot accession / id : P09919
 
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Entry Information
Entry status  (1)
REL
(7)
 
Experimental methods  (2)
X-ray diffraction
(6)
Solution NMR
(1)
 
Authors  (25)
Kuroki R
(3)
Okamoto T
(3)
Aritomi M
(2)
Honda S
(2)
Kunishima N
(2)
Miyafusa T
(2)
Morikawa K
(2)
Ota Y
(2)
Shibuya R
(2)
Cieslar C
(1)
Eisenberg D
(1)
Hill CP
(1)
Holak TA
(1)
Honjo E
(1)
Ishibashi M
(1)
Luers K
(1)
Lüers K
(1)
Maeda Y
(1)
Osslund TD
(1)
Ross A
(1)
Rudolph R
(1)
Tamada T
(1)
Tokunaga M
(1)
Zink T
(1)
Zink TW
(1)
 
Homo / hetero assembly  (2)
homo
(4)
hetero
(3)
 
Assembly composition  (2)
protein structure
(4)
protein/protein complex
(3)
 
Assembly polymer count  (3)
monomer
(3)
tetramer
(3)
trimer
(1)
 
Resolution distribution
1.5 - 2
(2)
2.0 - 2.5
(1)
2.5 - 3
(2)
3.0 - 3.5
(1)
 
Release year distribution
1990 - 1995
(2)
1995 - 2000
(2)
2000 - 2005
(2)
2005 - 2010
(1)
2015 - 2020
(2)
 
Journal  (5)
Nature
(2)
Proc Natl Acad Sci U S A
(2)
Biochem Biophys Res Commun
(1)
Biochemistry
(1)
FEBS J
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(7)
 
Organism name  (1)
Homo sapiens
(7)
 
Molecule name  (3)
G-CSF
(7)
Granulocyte colony-stimulating factor
(7)
Pluripoietin
(7)
 
Molecule type  (1)
Protein
(7)
 
Gene names  (3)
C17orf33
(7)
CSF3
(7)
GCSF
(7)
 
Interacting Molecules  (1)
Granulocyte colony-stimulating factor receptor
(3)
 
Function and Biology
Biological function  (5)
cytokine activity
(7)
enzyme binding
(7)
granulocyte colony-stimulating factor receptor binding
(7)
growth factor activity
(7)
signaling receptor binding
(7)
 
Biological process  (13)
cellular response to cytokine stimulus
(7)
cellular response to lipopolysaccharide
(7)
cytokine-mediated signaling pathway
(7)
granulocyte colony-stimulating factor signaling pathway
(7)
granulocyte differentiation
(7)
immune response
(7)
positive regulation of actin filament polymerization
(7)
positive regulation of cell population proliferation
(7)
positive regulation of myeloid cell differentiation
(7)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
(7)
positive regulation of transcription by RNA polymerase II
(7)
regulation of actin filament organization
(7)
response to ethanol
(7)
 
Biological cell component  (4)
endocytic vesicle lumen
(7)
extracellular region
(7)
extracellular space
(7)
lysosomal lumen
(7)
 
Sequence and Structure classification
SCOP fold  (1)
4-helical cytokines
(5)
 
SCOP family  (1)
Long-chain cytokines
(5)
 
CATH class  (1)
Mainly Alpha
(7)
 
CATH topology  (1)
Growth Hormone; Chain: A;
(7)
 
Pfam accession / name  (1)
PF16647 : GCSF
(7)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(5)
 
Diffraction radiation source type  (1)
Synchrotron
(5)
 
Diffraction source  (4)
PHOTON FACTORY BEAMLINE AR-NW12A
(2)
PHOTON FACTORY BEAMLINE BL-6B
(1)
SPRING-8 BEAMLINE BL38B1
(1)
SPRING-8 BEAMLINE BL41XU
(1)
 
Synchrotron site  (2)
Photon Factory
(3)
SPring-8
(2)
 
Diffraction detector type  (2)
CCD
(3)
Image plate
(2)
 
Refinement software  (2)
REFMAC
(4)
X-PLOR
(3)
 
NMR
NMR software packages  (1)
X-PLOR
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 7 of 7
Entries 1 to 7 of 7
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Crystal structure of C163, a backbone circularized G-CSF
Miyafusa T, Honda S
Biochem Biophys Res Commun (2018) [PMID: 29634929  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Granulocyte colony-stimulating factor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-140818 (Preferred)   search this ID
PDBe-KB: P09919    P09919   
X-ray diffraction
1.65Å resolution
Released: 13 Sep 2017
Model geometry
Fit model/data
5gw9
5gw9
5gw9
Crystal structure of C166, a backbone circularized G-CSF
Shibuya R, Miyafusa T, Honda S
FEBS J (2020) [PMID: 31605655  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Granulocyte colony-stimulating factor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-140818 (Preferred)   search this ID
PDBe-KB: P09919    P09919   
X-ray diffraction
1.7Å resolution
Released: 17 Apr 2019
Model geometry
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5zo6
5zo6
5zo6
2:2 COMPLEX OF G-CSF WITH ITS RECEPTOR
Aritomi M, Kunishima N, Okamoto T, Kuroki R, Ota Y, Morikawa K
Nature (1999) [PMID: 10537111  ]
Assembly composition: protein/protein complex
Bound ligands: NAG    NAG   
Assembly name: Granulocyte colony-stimulating factor and Granulocyte colony-stimulating factor receptor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-140820 (Preferred)   search this ID
PDBe-KB: P09919    P09919    P40223   
X-ray diffraction
2.8Å resolution
Released: 8 Mar 2000
Model geometry
Fit model/data
1cd9
1cd9
1cd9
Crystal Structure of the Human GCSF-Receptor Signaling Complex
Tamada T, Kuroki R
Proc Natl Acad Sci U S A (2006) [PMID: 16492764  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Carbohydrate polymer components:
Molecule 1 - NAG(2)
Assembly name: Granulocyte colony-stimulating factor and Granulocyte colony-stimulating factor receptor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-140821 (Preferred)   search this ID
PDBe-KB: P09919    P09919    Q99062   
X-ray diffraction
2.8Å resolution
Released: 7 Feb 2006
Model geometry
Fit model/data
2d9q
2d9q
2d9q
2:2 COMPLEX OF G-CSF WITH ITS RECEPTOR
Aritomi M, Kunishima N, Okamoto T, Kuroki R, Ota Y, Morikawa K
Nature (1999) [PMID: 10537111  ]
Assembly composition: protein/protein complex
Assembly name: Granulocyte colony-stimulating factor and Granulocyte colony-stimulating factor receptor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-140820 (Preferred)   search this ID
PDBe-KB: P09919    P09919    P40223   
X-ray diffraction
3.5Å resolution
Released: 8 Mar 2000
Model geometry
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1pgr
1pgr
1pgr
THE STRUCTURE OF GRANULOCYTE-COLONY-STIMULATING FACTOR AND ITS RELATIONSHIP TO THOSE OF OTHER GROWTH FACTORS
Hill CP, Osslund TD, Eisenberg D
Proc Natl Acad Sci U S A (1993) [PMID: 7685117  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Granulocyte colony-stimulating factor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-140822 (Preferred)   search this ID
PDBe-KB: P09919    P09919   
X-ray diffraction
2.2Å resolution
Released: 31 Jan 1994
Model geometry
Fit model/data
Data not analysed
1rhg
1rhg
1rhg
STRUCTURE AND DYNAMICS OF THE HUMAN GRANULOCYTE COLONY-STIMULATING FACTOR DETERMINED BY NMR SPECTROSCOPY. LOOP MOBILITY IN A FOUR-HELIX-BUNDLE PROTEIN
Zink TW, Ross A, Rudolph R, Holak TA
Biochemistry (1994) [PMID: 7518249  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Granulocyte colony-stimulating factor (Preferred)   search this complex
PDBe complex ID: PDB-CPX-140818 (Preferred)   search this ID
PDBe-KB: P09919   
Solution NMR
Released: 31 Jul 1994
Model geometry
Fit model/data
Data not deposited
1gnc
1gnc
1gnc
Entries 1 to 7 of 7
Entries 1 to 7 of 7