Uniprot accession / id : P10493  OR   Uniprot accession / id : P14543
 
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Entry Information
Entry status  (1)
REL
(3)
 
Experimental methods  (1)
X-ray diffraction
(3)
 
Authors  (15)
Hohenester E
(2)
Hopf M
(2)
Ries A
(2)
Timpl R
(2)
Gohring W
(1)
Göhring W
(1)
Kvansakul M
(1)
Liu J-H
(1)
Liu JH
(1)
Springer TA
(1)
Takagi J
(1)
Wang J-H
(1)
Wang JH
(1)
Yang Y
(1)
Yang YT
(1)
 
Homo / hetero assembly  (2)
hetero
(2)
homo
(1)
 
Assembly composition  (2)
protein/protein complex
(2)
protein structure
(1)
 
Assembly polymer count  (2)
dimer
(2)
monomer
(1)
 
Resolution distribution
1.5 - 2
(1)
2.0 - 2.5
(2)
 
Release year distribution
2000 - 2005
(3)
 
Journal  (3)
EMBO J
(1)
Nat Struct Biol
(1)
Nature
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(3)
 
Organism name  (1)
Mus musculus
(3)
 
Molecule name  (3)
Entactin
(3)
NID-1
(3)
Nidogen-1
(3)
 
Molecule type  (1)
Protein
(3)
 
Gene names  (2)
Ent
(3)
Nid1
(3)
 
Interacting Molecules  (2)
Basement membrane-specific heparan sulfate proteoglycan core protein
(1)
Laminin subunit gamma-1
(1)
 
Interacting ligands  (2)
CD : CADMIUM ION
(1)
ZN : ZINC ION
(1)
 
Sequence and Structure classification
SCOP fold  (3)
GFP-like
(2)
Knottins (small inhibitors, toxins, lectins)
(2)
6-bladed beta-propeller
(1)
 
SCOP family  (3)
Domain G2 of nidogen-1
(2)
EGF-like domain of nidogen-1
(2)
YWTD domain
(1)
 
CATH class  (1)
Mainly Beta
(3)
 
CATH topology  (2)
Green Fluorescent Protein
(2)
Neuraminidase
(1)
 
Pfam accession / name  (2)
PF07474 : G2F
(2)
PF00058 : Ldl_recept_b
(1)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(3)
 
Diffraction radiation source type  (1)
Synchrotron
(3)
 
Diffraction source  (2)
SRS BEAMLINE PX9.6
(2)
APS BEAMLINE 19-ID
(1)
 
Synchrotron site  (2)
SRS
(2)
APS
(1)
 
Diffraction detector type  (1)
CCD
(3)
 
Refinement software  (1)
CNS
(3)
 
Representative Structures
Representative Structures
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Entries 1 to 3 of 3
Entries 1 to 3 of 3
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Domain G2 of mouse nidogen-1
Hopf M, Gohring W, Ries A, Timpl R, Hohenester E
Nat Struct Biol (2001) [PMID: 11427896  ]
Source organism: Mus musculus  
Assembly composition: protein only structure
Assembly name: Nidogen-1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-145321 (Preferred)   search this ID
PDBe-KB: P10493   
X-ray diffraction
2.2Å resolution
Released: 28 Jun 2001
Model geometry
Fit model/data
1h4u
1h4u
1h4u
Nidogen-1 G2/Perlecan IG3 Complex
Kvansakul M, Hopf M, Ries A, Timpl R, Hohenester E
EMBO J (2001) [PMID: 11574465  ]
Source organism: Mus musculus  
Assembly composition: protein/protein complex
Bound ligands: ZN    ZN    EPE   
Assembly name: Basement membrane-specific heparan sulfate proteoglycan core protein and Nidogen-1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-145322 (Preferred)   search this ID
PDBe-KB: P10493    Q05793   
X-ray diffraction
2Å resolution
Released: 28 Nov 2001
Model geometry
Fit model/data
1gl4
1gl4
1gl4
Crystal structure of Nidogen/Laminin Complex
Takagi J, Yang YT, Liu J-H, Wang J-H, Springer TA
Nature (2003) [PMID: 12931195  ]
Source organism: Mus musculus  
Assembly composition: protein/protein complex
Bound ligands: CD    CD   
Assembly name: Laminin subunit gamma-1 and Nidogen-1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-135867 (Preferred)   search this ID
PDBe-KB: P10493    P02468   
X-ray diffraction
2.3Å resolution
Released: 12 Aug 2003
Model geometry
Fit model/data
1npe
1npe
1npe
Entries 1 to 3 of 3
Entries 1 to 3 of 3