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(1)
Experimental methods
(1)
X-ray diffraction
(32)
Authors
(192)
Baxter JD
(13)
Li Y
(12)
Yao B
(12)
Yao BQ
(12)
Fletterick RJ
(10)
Webb P
(8)
Li J
(7)
Li Q
(7)
Lu Z
(7)
Wu D
(7)
Wu X
(7)
Xiang Q
(7)
Xu Y
(7)
Yu H
(7)
Zhang C
(7)
Zhang Y
(7)
Zhao S
(7)
Zhuang X
(7)
Apriletti JW
(6)
Huber BR
(6)
Togashi M
(6)
Cunha-Lima ST
(5)
Tian S
(5)
Wang R
(5)
Wei Y
(5)
Xu S
(5)
Zhang S
(5)
Zheng W
(5)
Cunha Lima ST
(4)
Nguyen HT
(4)
Sandler B
(4)
West BL
(4)
Aparicio R
(3)
Figueira AC
(3)
Koehler K
(3)
Malm J
(3)
Nunes FM
(3)
Polikarpov I
(3)
Bleicher L
(2)
Desclozeaux M
(2)
Dias SM
(2)
Farnegardh M
(2)
Figueira ACM
(2)
Färnegårdh M
(2)
Grynfarb M
(2)
Husman B
(2)
Ingraham HA
(2)
Jouravel N
(2)
Juric S
(2)
Ljunggren J
(2)
Martinez L
(2)
Mellstrom K
(2)
Mellström K
(2)
Nascimento AS
(2)
Neves FA
(2)
Nguyen P
(2)
Nilsson S
(2)
Santos MA
(2)
Santos MAM
(2)
Skaf MS
(2)
Wagner R
(2)
Agback P
(1)
Ambrosio AL
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Ambrosio ALB
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Ammirati MJ
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Aparício R
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Apelqvist T
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Arnold LA
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Backsbro-Saedi A
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Beigelman LN
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Bladh LG
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Blatt LM
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Blethrow J
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Borngraeber S
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Brandt P
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Bruning JB
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Budny MJ
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Bäcksbro-Saeidi A
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Carlsson B
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Cavett V
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Chalmers MJ
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Chanda S
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Chiang P
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Chiellini G
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Chrunyk BA
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Cornelius P
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Craievich AF
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DaSilva-Jardine P
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Danley DE
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Darimont BD
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Dejneka T
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Deval J
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Devasthale P
(1)
Dias SGM
(1)
Dias SMG
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Donate PM
(1)
Dow RL
(1)
Doweyko AM
(1)
Einspahr H
(1)
Estebanez-Perpina E
(1)
More...
Homo / hetero assembly
(2)
homo
(17)
hetero
(15)
Assembly composition
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protein structure
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protein/protein complex
(14)
DNA/protein complex
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Assembly polymer count
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(16)
monomer
(14)
tetramer
(1)
trimer
(1)
Resolution distribution
1.5 - 2
(3)
2.0 - 2.5
(10)
2.5 - 3
(15)
3.0 - 3.5
(3)
3.5 - 4
(1)
Release year distribution
1995 - 2000
(2)
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2020 - 2025
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Journal
(12)
J Med Chem
(10)
Mol Endocrinol
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iScience
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Bioorg Med Chem Lett
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Proc Natl Acad Sci U S A
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Macromolecules
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Eukaryota
(32)
Organism name
(1)
Homo sapiens
(32)
Molecule name
(4)
Nuclear receptor subfamily 1 group A member 2
(32)
Thyroid hormone receptor beta
(32)
c-erbA-2
(32)
c-erbA-beta
(32)
Molecule type
(1)
Protein
(32)
Gene names
(4)
ERBA2
(32)
NR1A2
(32)
THR1
(32)
THRB
(32)
Interacting Molecules
(5)
Nuclear receptor coactivator 2
(13)
Retinoic acid receptor RXR-alpha
(2)
DNA (5'-D(*CP*AP*GP*GP*TP*CP*AP*TP*TP*(5IU)P*CP*AP*GP*GP*TP*CP*AP*G)-3')
(1)
DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*GP*AP*AP*AP*TP*GP*AP*CP*CP*T P*G)-3')
(1)
PROTEIN (GRIP1)
(1)
Interacting ligands
(24)
4HY : [4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID
(7)
8HO : 2-[(1-methyl-4-oxidanyl-7-phenoxy-isoquinolin-3-yl)carbonylamino]ethanoic acid
(5)
T3 : 3,5,3'TRIIODOTHYRONINE
(4)
ARS : ARSENIC
(2)
CAC : CACODYLATE ION
(2)
SO4 : SULFATE ION
(2)
442 : 2-[3,5-DIBROMO-4-(4-HYDROXY-3-{HYDROXY[(2-PHENYLETHYL)AMINO]METHYL}PHENOXY)PHENYL]ETHANE-1,1-DIOL
(1)
9GC : 2-[[1-methoxy-4-oxidanyl-7-[4-(phenylmethyl)phenoxy]isoquinolin-3-yl]carbonylamino]ethanoic acid
(1)
9IF : 2-[[1-methoxy-4-oxidanyl-7-(4-phenoxyphenoxy)isoquinolin-3-yl]carbonylamino]ethanoic acid
(1)
9II : 2-[[1-methoxy-4-oxidanyl-7-(4-phenylphenoxy)isoquinolin-3-yl]carbonylamino]ethanoic acid
(1)
9IL : 2-[[7-[2,6-dimethyl-4-(phenylcarbonyl)phenoxy]-1-methoxy-4-oxidanyl-isoquinolin-3-yl]carbonylamino]ethanoic acid
(1)
9IQ : 2-[[7-[4-(3,5-dimethylphenyl)carbonyl-2,6-dimethyl-phenoxy]-1-ethoxy-4-oxidanyl-isoquinolin-3-yl]carbonylamino]ethanoic acid
(1)
9IT : 2-[[7-[2,6-dimethyl-4-(3-methylphenyl)carbonyl-phenoxy]-1-methoxy-4-oxidanyl-isoquinolin-3-yl]carbonylamino]ethanoic acid
(1)
9IW : 2-[[1-ethoxy-7-[4-(3-fluoranyl-5-methoxy-phenyl)carbonyl-2,6-dimethyl-phenoxy]-4-oxidanyl-isoquinolin-3-yl]carbonylamino]ethanoic acid
(1)
A1H2J : 6-azanyl-2-[3,5-bis(chloranyl)-4-[(6-oxidanylidene-5-propan-2-yl-1~{H}-pyridazin-3-yl)oxy]phenyl]-1,2,4-triazine-3,5-dione
(1)
B72 : {4-[4-hydroxy-3-(1-methylethyl)benzyl]-3,5-dimethylphenoxy}acetic acid
(1)
G24 : [4-(3-BENZYL-4-HYDROXYBENZYL)-3,5-DIMETHYLPHENOXY]ACETIC ACID
(1)
IH5 : {3,5-DICHLORO-4-[4-HYDROXY-3-(PROPAN-2-YL)PHENOXY]PHENYL}ACETIC ACID
(1)
LEG : 1-(4-HEXYLPHENYL)PROP-2-EN-1-ONE
(1)
NA : SODIUM ION
(1)
OEF : 3,5-DIBROMO-4-(3-ISOPROPYL-PHENOXY)BENZOIC ACID
(1)
PFA : [4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL
(1)
T44 : 3,5,3',5'-TETRAIODO-L-THYRONINE
(1)
ZN : ZINC ION
(1)
Function and Biology
Biological function
(5)
DNA binding
(32)
nuclear receptor activity
(32)
DNA-binding transcription factor activity
(1)
sequence-specific DNA binding
(1)
zinc ion binding
(1)
Biological process
(1)
regulation of DNA-templated transcription
(32)
Sequence and Structure classification
SCOP fold
(2)
Nuclear receptor ligand-binding domain
(10)
Glucocorticoid receptor-like (DNA-binding domain)
(1)
SCOP family
(2)
Nuclear receptor ligand-binding domain
(10)
Nuclear receptor
(1)
CATH class
(2)
Mainly Alpha
(18)
Alpha Beta
(1)
CATH topology
(2)
Retinoid X Receptor
(18)
Erythroid Transcription Factor GATA-1; Chain A
(1)
Pfam accession / name
(2)
PF00104 : Hormone_recep
(31)
PF00105 : zf-C4
(1)
Experimental Information
Diffraction protocol
(1)
Single wavelength
(32)
Diffraction radiation source type
(2)
Synchrotron
(26)
Rotating anode
(6)
Diffraction source
(15)
SSRF BEAMLINE BL19U1
(7)
SSRF BEAMLINE BL18U1
(4)
ALS BEAMLINE 5.0.2
(3)
ALS BEAMLINE 8.3.1
(3)
RIGAKU ULTRAX 18
(3)
RIGAKU RU200
(2)
SSRL BEAMLINE BL9-1
(2)
CHESS BEAMLINE A1
(1)
EMBL/DESY, HAMBURG BEAMLINE BW7A
(1)
EMBL/DESY, HAMBURG BEAMLINE BW7B
(1)
RIGAKU RU300
(1)
SLS BEAMLINE X10SA
(1)
SSRF BEAMLINE BL17U1
(1)
SSRL BEAMLINE BL11-1
(1)
SSRL BEAMLINE BL7-1
(1)
Synchrotron site
(6)
SSRF
(12)
ALS
(6)
SSRL
(4)
EMBL/DESY, Hamburg
(2)
CHESS
(1)
SLS
(1)
Diffraction detector type
(4)
Pixel
(14)
CCD
(9)
Image plate
(7)
Area detector
(1)
Refinement software
(6)
REFMAC
(16)
CNS
(9)
PHENIX
(8)
CNX
(1)
ELVES
(1)
X-PLOR
(1)
Representative Structures
Representative Structures
Entries
Macromolecules
Compounds
Protein families
Entries 1 to 10 of 32
Select all entries on this page
Human thyroid hormone receptor beta ligand binding domain in complex with beta-selective agonist ALG-055009
Lammens A, Maskos K, Stoycheva AD, McGowan DC
J Med Chem
(2024)
[PMID: 39221768 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Bound ligands:
A1H2J
Assembly name:
Thyroid hormone receptor beta
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145480 (Preferred)
search this ID

A novel chemical derivative(56) of THRB agonist
Yao BQ, Li Y
J Med Chem
(2022)
[PMID: 35507418 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
9II
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
A novel chemical derivative(92) of THRB agonist
Yao BQ, Li Y
J Med Chem
(2022)
[PMID: 35507418 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
9IW
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
A novel chemical derivative(53) of THRB agonist
Yao BQ, Li Y
J Med Chem
(2022)
[PMID: 35507418 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
9GC
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
A novel chemical derivative(52) of THRB agonist
Yao BQ, Li Y
J Med Chem
(2022)
[PMID: 35507418 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
9IF
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
A novel chemical derivative(89) of THRB agonist
Yao BQ, Li Y
J Med Chem
(2022)
[PMID: 35507418 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
9IT
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
A novel chemical derivative(85) of THRB agonist
Yao BQ, Li Y
J Med Chem
(2022)
[PMID: 35507418 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
9IQ
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
A novel chemical derivative(71) of THRB agonist
Yao BQ, Li Y
J Med Chem
(2022)
[PMID: 35507418 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
9IL
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
THRb mutation with a novel agonist
Yao BQ, Li Y
iScience
(2019)
[PMID: 31655060 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
8HO
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
THRb mutation with a novel agonist
Yao BQ, Li Y
iScience
(2019)
[PMID: 31655060 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Bound ligands:
8HO
Assembly name:
Thyroid hormone receptor beta and Nuclear receptor coactivator 2
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145483 (Preferred)
search this ID
Entries 1 to 10 of 32