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(1)
Experimental methods
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X-ray diffraction
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Electron Microscopy
(11)
Authors
(64)
Garman SC
(9)
Ozden C
(9)
Stratton MM
(9)
Agnello E
(8)
Esposito EA
(8)
Foster J
(8)
Furukawa H
(8)
Gaubitz C
(8)
Hayashi Y
(8)
Kelch BA
(8)
Lapinskas E
(8)
Mitsugi T
(8)
Saneyoshi T
(8)
Santos N
(8)
Simorowski N
(8)
Sloutsky R
(8)
Özden C
(8)
Banke TG
(6)
Epstein M
(6)
Hiro F
(6)
Hyunook K
(6)
Kang H
(6)
Liotta DC
(6)
Paladugu S
(6)
Perszyk R
(6)
Traynelis SF
(6)
Buhl DL
(3)
Chanda PK
(3)
Green M
(3)
Knafels JD
(3)
Mony L
(3)
Pandit J
(3)
Paoletti P
(3)
Sciabola S
(3)
Stroebel D
(3)
Zhu S
(3)
Abdulla T
(2)
Chen WJ
(2)
Foster JC
(2)
Geis C
(2)
Gomez R
(2)
Gómez R
(2)
Heckmann M
(2)
Huang X
(2)
Kleeman S
(2)
Michalski K
(2)
Pruss H
(2)
Prüss H
(2)
Santos NJ
(2)
Schmidl L
(2)
Sun X
(2)
Vallese F
(2)
Wang Q
(2)
Wen H
(2)
Zhang J
(2)
Du D
(1)
Guo F
(1)
Lin H
(1)
Luo C
(1)
Lv S
(1)
Ye F
(1)
Zhang T
(1)
Zhang Y
(1)
Zhou L
(1)
Homo / hetero assembly
(1)
hetero
(23)
Assembly composition
(1)
protein/protein complex
(23)
Assembly polymer count
(3)
dimer
(12)
tetramer
(10)
octamer
(1)
Resolution distribution
1.5 - 2
(1)
2.0 - 2.5
(4)
2.5 - 3
(7)
3.0 - 3.5
(3)
3.5 - 4
(6)
4.0 - 4.5
(2)
Release year distribution
2015 - 2020
(6)
2020 - 2025
(20)
2025 - 2030
(8)
Journal
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Cell Rep
(8)
Neuron
(8)
Mol Pharmacol
(3)
Nat Struct Mol Biol
(2)
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To be published
(1)
Macromolecules
Organism superkingdom
(1)
Eukaryota
(23)
Organism name
(1)
Homo sapiens
(23)
Molecule name
(9)
GluN2B
(23)
Glutamate [NMDA] receptor subunit epsilon-2
(23)
Glutamate receptor ionotropic, NMDA 2B
(23)
N-methyl D-aspartate receptor subtype 2B
(23)
N-methyl-D-aspartate receptor subunit 3
(23)
NMDAR2B
(23)
NR2B
(23)
NR3
(23)
hNR3
(23)
Molecule type
(1)
Protein
(23)
Gene names
(2)
GRIN2B
(23)
NMDAR2B
(23)
Interacting Molecules
(5)
Glutamate receptor ionotropic, NMDA 1
(14)
Calcium/calmodulin-dependent protein kinase type II subunit alpha
(9)
Glutamate receptor ionotropic, NMDA 2D
(6)
007-168 Heavy
(2)
007-168 Light
(2)
Interacting ligands
(12)
NAG : 2-acetamido-2-deoxy-beta-D-glucopyranose
(9)
GLU : GLUTAMIC ACID
(5)
7RC : (2R)-4-(3-phosphonopropyl)piperazine-2-carboxylic acid
(2)
ATP : ADENOSINE-5'-TRIPHOSPHATE
(2)
JC9 : (2~{S})-2-(2-chlorophenyl)-2-(methylamino)cyclohexan-1-one
(2)
NA : SODIUM ION
(2)
2JL : (2S,3R)-1-(phenanthren-2-ylcarbonyl)piperazine-2,3-dicarboxylic acid
(1)
5SL : ~{N}-[(1~{S},3~{S})-3-[3-[(4-methylphenyl)methyl]-1,2,4-oxadiazol-5-yl]cyclopentyl]-1~{H}-pyrazolo[3,4-d]pyrimidin-4-amine
(1)
5SM : 5-[3-[bis(fluoranyl)methyl]-4-fluoranyl-phenyl]-3-[(2-methylimidazol-1-yl)methyl]pyridazine
(1)
EDO : 1,2-ETHANEDIOL
(1)
MG : MAGNESIUM ION
(1)
QEL : 4-[(1R,2S)-2-(4-benzylpiperidin-1-yl)-1-hydroxypropyl]phenol
(1)
Function and Biology
Biological function
(3)
ligand-gated monoatomic ion channel activity
(2)
monoatomic ion channel activity
(1)
signaling receptor activity
(1)
Biological process
(1)
monoatomic ion transport
(1)
Biological cell component
(1)
membrane
(2)
Sequence and Structure classification
CATH class
(1)
Alpha Beta
(3)
CATH topology
(1)
Rossmann fold
(3)
Pfam accession / name
(3)
PF01094 : ANF_receptor
(14)
PF00060 : Lig_chan
(10)
PF10613 : Lig_chan-Glu_bd
(10)
Representative Structures
Representative Structures
Entries
Macromolecules
Compounds
Protein families
Entries 1 to 10 of 23
Select all entries on this page
CRYSTAL STRUCTURE OF AMINO TERMINAL DOMAINS OF THE NMDA RECEPTOR SUBUNIT GLUN1 AND GLUN2B IN COMPLEX WITH MK-22
Pandit J
Mol Pharmacol
(2016)
[PMID: 26912815 ]
Source organisms: Xenopus laevis , Homo sapiens
Assembly composition: protein/protein complex
Carbohydrate polymer components:
Molecule 1 -
BMA(1), MAN(2), NAG(2)
Assembly name:
Glutamate receptor ionotropic, NMDA 1 and Glutamate receptor ionotropic, NMDA 2B
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-103593 (Preferred)
search this ID
CRYSTAL STRUCTURE OF AMINO TERMINAL DOMAINS OF THE NMDA RECEPTOR SUBUNIT GLUN1 AND GLUN2B IN COMPLEX WITH EVT-101
Pandit J
Mol Pharmacol
(2016)
[PMID: 26912815 ]
Source organisms: Xenopus laevis , Homo sapiens
Assembly composition: protein/protein complex
Carbohydrate polymer components:
Molecule 1 -
BMA(1), MAN(2), NAG(2)
Assembly name:
Glutamate receptor ionotropic, NMDA 1 and Glutamate receptor ionotropic, NMDA 2B
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-103593 (Preferred)
search this ID
CRYSTAL STRUCTURE OF AMINO TERMINAL DOMAINS OF THE NMDA RECEPTOR SUBUNIT GLUN1 AND GLUN2B IN COMPLEX WITH IFENPRODIL
Pandit J
Mol Pharmacol
(2016)
[PMID: 26912815 ]
Source organisms: Xenopus laevis , Homo sapiens
Assembly composition: protein/protein complex
Carbohydrate polymer components:
Molecule 1 -
BMA(1), MAN(2), NAG(2)
Assembly name:
Glutamate receptor ionotropic, NMDA 1 and Glutamate receptor ionotropic, NMDA 2B
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-103593 (Preferred)
search this ID
Gly-,Glu-,(S)-(+)-ketamine bound GluN1a-2B-2D NMDAR
Hyunook K, Hiro F
Neuron
(2025)
[PMID: 39954679 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Carbohydrate polymer components:
Molecule 1 -
NAG(2)
PDBe complex ID:
PDB-CPX-289359 (Preferred)
search this ID
Structure of the human GluN1-N2B NMDA receptors in the Mg2+ free state
Huang X, Sun X, Zhu S
Neuron
(2025)
[PMID: 40010346 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
NMDA receptor complex, GluN1-GluN2B
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-170225 (Preferred)
search this ID
Human GluN1-2B with Fab 007-168 Local refinement of ATD
Michalski K, Furukawa H
Nat Struct Mol Biol
(2024)
[PMID: 39227719 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
PDBe complex ID:
PDB-CPX-280147 (Preferred)
search this ID
Nonactive state of Gly-,Glu- bound GluN1a-2B-2D NMDAR (Low-res)
Hyunook K, Hiro F
Neuron
(2025)
[PMID: 39954679 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Carbohydrate polymer components:
Molecule 1 -
NAG(2)
PDBe complex ID:
PDB-CPX-289359 (Preferred)
search this ID
Gly-,PPDA- bound GluN1a-2B-2D NMDAR
Gly-,Glu-,(S)-DQP-997-74 bound GluN1a-2B-2D NMDAR
Hyunook K, Hiro F
Neuron
(2025)
[PMID: 39954679 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Carbohydrate polymer components:
Molecule 1 -
NAG(2)
PDBe complex ID:
PDB-CPX-289359 (Preferred)
search this ID
Structure of the human GluN1-N2B NMDA receptors in the Mg2+ bound state
Huang X, Sun X, Zhu S
Neuron
(2025)
[PMID: 40010346 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
NMDA receptor complex, GluN1-GluN2B
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-170225 (Preferred)
search this ID
Entries 1 to 10 of 23