Uniprot accession / id : Q05909  OR   Uniprot accession / id : P23470
 
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Entry Information
Entry status  (1)
REL
(23)
 
Experimental methods  (1)
X-ray diffraction
(23)
 
Authors  (95)
Appiah KK
(13)
Beno BR
(13)
Bronson J
(13)
Dzierba C
(13)
Gao M
(13)
Gerritz SW
(13)
Goldfarb V
(13)
Huang Y
(13)
Kiefer SE
(13)
Kish K
(13)
Kostich WA
(13)
Macor JE
(13)
McDonnell PA
(13)
O'Connell J
(13)
Sheriff S
(13)
Shi S
(13)
Westphal RS
(13)
Yanchunas J
(13)
Zhai W
(13)
Zhu S
(13)
Bouyain S
(5)
Watkins DJ
(3)
Agarwal R
(2)
Alfano I
(2)
Almo SC
(2)
Alvarado J
(2)
Arrowsmith C
(2)
Barr AJ
(2)
Bonanno JB
(2)
Burgess-Brown NA
(2)
Burley SK
(2)
Chance MR
(2)
Dilorenzo TP
(2)
Dubreuil V
(2)
Edwards A
(2)
Emtage S
(2)
Eswaramoorthy S
(2)
Faber-Barata J
(2)
Filippakopoulos P
(2)
Fiser A
(2)
Hall DR
(2)
Hammel M
(2)
Harroch S
(2)
Jin X
(2)
Karuppan SJ
(2)
King ON
(2)
Knapp S
(2)
Kumaran D
(2)
Lawrence DS
(2)
Lee WH
(2)
Madegowda M
(2)
Malashkevich V
(2)
Mehzabeen N
(2)
Muller S
(2)
Müller S
(2)
New York SGX Research Center for Structural Genomics (NYSGXRC)
(2)
Nikolaienko RM
(2)
Patskovsky Y
(2)
Ragumani S
(2)
Ramagopal UA
(2)
Reyes C
(2)
Sali A
(2)
Sauder JM
(2)
Savitsky P
(2)
Smith D
(2)
Stella SL
(2)
Structural Genomics Consortium (SGC)
(2)
Sundstrom M
(2)
Swaminathan S
(2)
Ugochukwu E
(2)
Wasserman SR
(2)
Zalmai R
(2)
Zhang ZY
(2)
von Delft F
(2)
Bain KT
(1)
Barr A
(1)
Bera A
(1)
Cheng W
(1)
Das S
(1)
Debreczeni J
(1)
Eswaran J
(1)
Freeman J
(1)
Freeman JC
(1)
Gileadi O
(1)
Johansson C
(1)
Ju C
(1)
Lv Z
(1)
Min T
(1)
Mu H
(1)
Ni C
(1)
Pelletier L
(1)
Shapiro L
(1)
Wang F
(1)
Wasserman S
(1)
Weigelt J
(1)
 
Homo / hetero assembly  (2)
homo
(20)
hetero
(3)
 
Assembly composition  (2)
protein structure
(20)
protein/protein complex
(3)
 
Assembly polymer count  (2)
monomer
(20)
dimer
(3)
 
Resolution distribution
1.5 - 2
(7)
2.0 - 2.5
(13)
2.5 - 3
(3)
 
Release year distribution
2005 - 2010
(7)
2010 - 2015
(13)
2015 - 2020
(2)
2020 - 2025
(1)
 
Journal  (6)
J Med Chem
(13)
Proc Natl Acad Sci U S A
(3)
Cell
(2)
J Biol Chem
(2)
J Struct Funct Genomics
(2)
To be published
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(23)
 
Organism name  (2)
Homo sapiens
(20)
Mus musculus
(3)
 
Molecule name  (3)
Protein-tyrosine phosphatase gamma
(23)
R-PTP-gamma
(23)
Receptor-type tyrosine-protein phosphatase gamma
(23)
 
Molecule type  (1)
Protein
(23)
 
Gene names  (3)
PTPG
(20)
PTPRG
(20)
Ptprg
(3)
 
Interacting Molecules  (3)
Contactin-3
(1)
Contactin-4
(1)
Contactin-6
(1)
 
Interacting ligands  (20)
SO4 : SULFATE ION
(5)
VO4 : VANADATE ION
(3)
ACY : ACETIC ACID
(2)
FMT : FORMIC ACID
(2)
MLI : MALONATE ION
(2)
NXY : 3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid
(2)
1PS : 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
(1)
ACT : ACETATE ION
(1)
CL : CHLORIDE ION
(1)
EDO : 1,2-ETHANEDIOL
(1)
FLC : CITRATE ANION
(1)
MES : 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
(1)
NA : SODIUM ION
(1)
NX1 : 3-[(3-bromo-4-chlorobenzyl)sulfanyl]thiophene-2-carboxylic acid
(1)
NX2 : 3-[(3,4-dichlorobenzyl)sulfanyl]-N-(methylsulfonyl)thiophene-2-carboxamide
(1)
NX3 : N-[(3-aminophenyl)sulfonyl]-3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxamide
(1)
NX4 : 5-[({3-[(3,4-dichlorobenzyl)sulfanyl]thiophen-2-yl}carbonyl)sulfamoyl]-2-methoxybenzoic acid
(1)
NX5 : 2-[(3,4-dichlorobenzyl)sulfanyl]benzoic acid
(1)
NXV : 2-[(3,4-dichlorobenzyl)sulfanyl]-4-(4-hydroxybut-1-yn-1-yl)benzoic acid
(1)
NXW : 2-[(3,4-dichlorobenzyl)sulfanyl]-4-{[3-({N-[2-(methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic acid
(1)
 
Function and Biology
EC number / name  (1)
3.1.3.48 : Protein-tyrosine-phosphatase
(23)
 
Biological function  (3)
protein tyrosine phosphatase activity
(18)
carbonate dehydratase activity
(5)
zinc ion binding
(5)
 
Biological process  (2)
dephosphorylation
(18)
protein dephosphorylation
(18)
 
Sequence and Structure classification
CATH class  (1)
Alpha Beta
(22)
 
CATH topology  (2)
Protein-Tyrosine Phosphatase; Chain A
(17)
Carbonic Anhydrase II
(5)
 
Pfam accession / name  (2)
PF00102 : Y_phosphatase
(18)
PF00194 : Carb_anhydrase
(5)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(23)
 
Diffraction radiation source type  (2)
Synchrotron
(12)
Rotating anode
(11)
 
Diffraction source  (10)
RIGAKU FR-E SUPERBRIGHT
(9)
APS BEAMLINE 17-ID
(3)
APS BEAMLINE 22-ID
(3)
APS BEAMLINE 22-BM
(2)
CLSI BEAMLINE 08ID-1
(1)
NSLS BEAMLINE X29A
(1)
NSLS BEAMLINE X4A
(1)
RIGAKU
(1)
RIGAKU FR-E
(1)
SLS BEAMLINE X10SA
(1)
 
Synchrotron site  (4)
APS
(8)
NSLS
(2)
CLSI
(1)
SLS
(1)
 
Diffraction detector type  (3)
CCD
(13)
Image plate
(9)
Pixel
(1)
 
Refinement software  (6)
CNS
(10)
CNX
(10)
PHENIX
(5)
REFMAC
(5)
BUSTER
(3)
BUSTER-TNT
(2)
 
Representative Structures
Representative Structures
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Entries 1 to 10 of 23
Entries 1 to 10 of 23
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Crystal structure of the complex between Carbonic anhydrase-like domain of PTPRG and Immunoglobulin domains 2-3 of CNTN3
Nikolaienko RM, Bouyain S
J Biol Chem (2016) [PMID: 27539848  ]
Assembly composition: protein/protein complex
Bound ligands: FMT    MLI    FMT   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma and Contactin-3 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149981 (Preferred)   search this ID
PDBe-KB: P23470    Q07409   
X-ray diffraction
2.6Å resolution
Released: 31 Aug 2016
Model geometry
Fit model/data
5e5r
5e5r
5e5r
Crystal structure of the complex between Carbonic anhydrase-like domain of PTPRG and Immunoglobulin domains 2-3 of CNTN6
Nikolaienko RM, Bouyain S
J Biol Chem (2016) [PMID: 27539848  ]
Source organism: Mus musculus  
Assembly composition: protein/protein complex
Bound ligands: FMT    MLI    1PS    ACY    MLT    FMT    1PS    MLT    ACY   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma and Contactin-6 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-170266 (Preferred)   search this ID
PDBe-KB: Q05909    Q9JMB8   
X-ray diffraction
2Å resolution
Released: 31 Aug 2016
Model geometry
Fit model/data
5e5u
5e5u
5e5u
The Crystal Structure of PTPRG from Biortus.
Wang F, Cheng W, Lv Z, Ju C, Ni C
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Receptor-type tyrosine-protein phosphatase gamma (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149980 (Preferred)   search this ID
PDBe-KB: P23470   
X-ray diffraction
2.55Å resolution
Released: 6 Mar 2024
Model geometry
Fit model/data
8xqd
8xqd
8xqd
PTPRG CNTN4 complex
Bouyain S
Proc Natl Acad Sci U S A (2010) [PMID: 20133774  ]
Source organism: Mus musculus  
Assembly composition: protein/protein complex
Bound ligands: NAG    NAG   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma and Contactin-4 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-170265 (Preferred)   search this ID
PDBe-KB: Q05909    Q69Z26   
X-ray diffraction
1.999Å resolution
Released: 22 Dec 2009
Model geometry
Fit model/data
3kld
3kld
3kld
Human receptor protein tyrosine phosphatase gamma, domain 1, trigonal crystal form
Sheriff S
J Med Chem (2011) [PMID: 21882820  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Receptor-type tyrosine-protein phosphatase gamma (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149980 (Preferred)   search this ID
PDBe-KB: P23470   
X-ray diffraction
2.41Å resolution
Released: 28 Dec 2011
Model geometry
Fit model/data
3qcn
3qcn
3qcn
Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with vanadate, trigonal crystal form
Sheriff S
J Med Chem (2011) [PMID: 21882820  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: VO4    ACY    VO4    ACY   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149980 (Preferred)   search this ID
PDBe-KB: P23470   
X-ray diffraction
1.8Å resolution
Released: 28 Dec 2011
Model geometry
Fit model/data
3qcd
3qcd
3qcd
Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid via co-crystallization
Sheriff S
J Med Chem (2011) [PMID: 21882820  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: NXY    NXY    SO4   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149980 (Preferred)   search this ID
PDBe-KB: P23470   
X-ray diffraction
2.5Å resolution
Released: 28 Dec 2011
Model geometry
Fit model/data
3qcf
3qcf
3qcf
Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3-bromo-4-chlorobenzyl)sulfanyl]thiophene-2-carboxylic acid
Sheriff S
J Med Chem (2011) [PMID: 21882820  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: NX1    ACY    NX1    ACY   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149980 (Preferred)   search this ID
PDBe-KB: P23470   
X-ray diffraction
2.05Å resolution
Released: 28 Dec 2011
Model geometry
Fit model/data
3qcg
3qcg
3qcg
Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid via soaking
Sheriff S
J Med Chem (2011) [PMID: 21882820  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: NXY    NXY    SO4   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149980 (Preferred)   search this ID
PDBe-KB: P23470   
X-ray diffraction
2.1Å resolution
Released: 28 Dec 2011
Model geometry
Fit model/data
3qce
3qce
3qce
Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3,4-dichlorobenzyl)sulfanyl]-N-(methylsulfonyl)thiophene-2-carboxamide
Sheriff S
J Med Chem (2011) [PMID: 21882820  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: NX2    NX2   
Assembly name: Receptor-type tyrosine-protein phosphatase gamma (Preferred)   search this complex
PDBe complex ID: PDB-CPX-149980 (Preferred)   search this ID
PDBe-KB: P23470   
X-ray diffraction
2.4Å resolution
Released: 28 Dec 2011
Model geometry
Fit model/data
3qch
3qch
3qch
Entries 1 to 10 of 23
Entries 1 to 10 of 23