Uniprot accession / id : Q5SXA9  OR   Uniprot accession / id : Q8IX03  OR   Uniprot accession / id : H0YAU4
 
Filter by :
Entry Information
Entry status  (1)
REL
(10)
 
Experimental methods  (1)
X-ray diffraction
(10)
 
Authors  (26)
Ji Z
(5)
Lin Z
(5)
Yang Z
(5)
Zhang M
(5)
Bagby S
(4)
Crennell SJ
(4)
Guan K
(4)
Harris G
(4)
Ishima R
(4)
Kalli AC
(4)
Kremerskothen J
(4)
Posner MG
(4)
Sansom MSP
(4)
Upadhyay A
(4)
Xie R
(4)
Huang X
(1)
Kato-Murayama M
(1)
Ke X
(1)
Li H
(1)
Lu Y
(1)
Ma S
(1)
Murayama K
(1)
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(1)
Shirouzu M
(1)
Terada T
(1)
Yokoyama S
(1)
 
Homo / hetero assembly  (2)
hetero
(5)
homo
(5)
 
Assembly composition  (2)
protein structure
(5)
protein/protein complex
(5)
 
Assembly polymer count  (2)
dimer
(7)
monomer
(3)
 
Resolution distribution
1.5 - 2
(1)
2.0 - 2.5
(5)
2.5 - 3
(4)
 
Release year distribution
2005 - 2010
(1)
2015 - 2020
(9)
 
Journal  (4)
Elife
(4)
J Biol Chem
(4)
Cell Rep
(1)
To be published
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(10)
 
Organism name  (2)
Homo sapiens
(5)
Mus musculus
(5)
 
Molecule name  (5)
KIBRA
(10)
Kidney and brain protein
(10)
Protein KIBRA
(10)
WW domain-containing protein 1
(10)
HBeAg-binding protein 3
(5)
 
Molecule type  (1)
Protein
(10)
 
Gene names  (5)
KIAA0869
(5)
KIBRA
(5)
Kiaa0869
(5)
WWC1
(5)
Wwc1
(5)
 
Interacting Molecules  (5)
Angiomotin
(1)
Beta-dystroglycan
(1)
Dendrin
(1)
Serine/threonine-protein kinase LATS1
(1)
Tyrosine-protein phosphatase non-receptor type 14
(1)
 
Interacting ligands  (8)
GOL : GLYCEROL
(5)
SO4 : SULFATE ION
(2)
4PT : (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE
(1)
CL : CHLORIDE ION
(1)
FMT : FORMIC ACID
(1)
PBU : (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE
(1)
PEG : DI(HYDROXYETHYL)ETHER
(1)
PO4 : PHOSPHATE ION
(1)
 
Sequence and Structure classification
CATH class  (1)
Mainly Beta
(5)
 
CATH topology  (1)
Immunoglobulin-like
(5)
 
Pfam accession / name  (2)
PF00168 : C2
(5)
PF00397 : WW
(5)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(10)
 
Diffraction radiation source type  (2)
Synchrotron
(6)
Rotating anode
(4)
 
Diffraction source  (3)
SSRF BEAMLINE BL19U1
(5)
RIGAKU MICROMAX-007 HF
(4)
SPRING-8 BEAMLINE BL26B2
(1)
 
Synchrotron site  (2)
SSRF
(5)
SPring-8
(1)
 
Diffraction detector type  (2)
CCD
(7)
Pixel
(3)
 
Refinement software  (2)
PHENIX
(9)
CNS
(1)
 
Representative Structures
Representative Structures
100%
95%
90%
70%
50%
40%
30%
Entries 1 to 10 of 10
Entries 1 to 10 of 10
 Select all entries on this page
Human KIBRA C2 domain mutant C771A in complex with phosphatidylinositol 3,4,5-trisphosphate
Crennell SJ, Posner MG, Bagby S
J Biol Chem (2018) [PMID: 29724824  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: 4PT    GOL    SO4    4PT   
Assembly name: Protein KIBRA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-184903 (Preferred)   search this ID
PDBe-KB: Q8IX03   
X-ray diffraction
2.598Å resolution
Released: 16 May 2018
Model geometry
Fit model/data
6fjc
6fjc
6fjc
Structure of KIBRA and Dendrin Complex
Lin Z, Yang Z, Ji Z, Zhang M
Cell Rep (2019) [PMID: 30784589  ]
Source organism: Mus musculus  
Assembly composition: protein/protein complex
Assembly name: Protein KIBRA and Dendrin (Preferred)   search this complex
PDBe complex ID: PDB-CPX-178286 (Preferred)   search this ID
PDBe-KB: Q5SXA9    Q80TS7   
X-ray diffraction
2.753Å resolution
Released: 20 Mar 2019
Model geometry
Fit model/data
6j69
6j69
6j69
Crystal Structure of KIBRA and Angiomotin complex
Lin Z, Yang Z, Ji Z, Zhang M
Elife (2019) [PMID: 31486770  ]
Assembly composition: protein/protein complex
Assembly name: Protein KIBRA and Angiomotin (Preferred)   search this complex
PDBe complex ID: PDB-CPX-280201 (Preferred)   search this ID
PDBe-KB: Q5SXA9    Q4VCS5   
X-ray diffraction
2Å resolution
Released: 25 Sep 2019
Model geometry
Fit model/data
6jjx
6jjx
6jjx
Crystal Structure of KIBRA and beta-Dystroglycan
Lin Z, Yang Z, Ji Z, Zhang M
Elife (2019) [PMID: 31486770  ]
Assembly composition: protein/protein complex
Bound ligands: SO4   
Assembly name: Protein KIBRA and Beta-dystroglycan (Preferred)   search this complex
PDBe complex ID: PDB-CPX-171923 (Preferred)   search this ID
PDBe-KB: Q5SXA9    Q14118   
X-ray diffraction
2.298Å resolution
Released: 25 Sep 2019
Model geometry
Fit model/data
6jjy
6jjy
6jjy
Human KIBRA C2 domain mutant C771A in complex with phosphatidylinositol 4,5-bisphosphate
Crennell SJ, Posner MG, Bagby S
J Biol Chem (2018) [PMID: 29724824  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: GOL    PBU    SO4    PBU   
Assembly name: Protein KIBRA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-184903 (Preferred)   search this ID
PDBe-KB: Q8IX03   
X-ray diffraction
2.898Å resolution
Released: 16 May 2018
Model geometry
Fit model/data
6fjd
6fjd
6fjd
human KIBRA C2 domain mutant C771A
Crennell SJ, Posner MG, Bagby S
J Biol Chem (2018) [PMID: 29724824  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: GOL    PO4   
Assembly name: Protein KIBRA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-184904 (Preferred)   search this ID
PDBe-KB: Q8IX03   
X-ray diffraction
2.415631Å resolution
Released: 16 May 2018
Model geometry
Fit model/data
6fb4
6fb4
6fb4
Human KIBRA C2 domain mutant M734I S735A
Crennell SJ, Posner MG, Bagby S
J Biol Chem (2018) [PMID: 29724824  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: PEG    GOL    PEG   
Assembly name: Protein KIBRA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-184904 (Preferred)   search this ID
PDBe-KB: Q8IX03   
X-ray diffraction
2.6421585Å resolution
Released: 16 May 2018
Model geometry
Fit model/data
6fd0
6fd0
6fd0
Crystal Structure of KIBRA and PTPN14 complex
Lin Z, Yang Z, Ji Z, Zhang M
Elife (2019) [PMID: 31486770  ]
Assembly composition: protein/protein complex
Bound ligands: FMT    MG    FMT    GOL    CL    MG   
Assembly name: Protein KIBRA and Tyrosine-protein phosphatase non-receptor type 14 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-172374 (Preferred)   search this ID
PDBe-KB: Q5SXA9    Q15678   
X-ray diffraction
2.4Å resolution
Released: 25 Sep 2019
Model geometry
Fit model/data
6jjw
6jjw
6jjw
Structure of KIBRA and LATS1 Complex
Lin Z, Yang Z, Ji Z, Zhang M
Elife (2019) [PMID: 31486770  ]
Source organism: Mus musculus  
Assembly composition: protein/protein complex
Assembly name: Protein KIBRA and Serine/threonine-protein kinase LATS1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-178287 (Preferred)   search this ID
PDBe-KB: Q5SXA9    Q8BYR2   
X-ray diffraction
2.495Å resolution
Released: 25 Sep 2019
Model geometry
Fit model/data
6j68
6j68
6j68
Crystal structure of C2 domain of KIBRA protein
Murayama K, Kato-Murayama M, Terada T, Shirouzu M, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Modified residues: MSE    MSE   
Assembly name: Protein KIBRA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-184903 (Preferred)   search this ID
PDBe-KB: Q8IX03   
X-ray diffraction
2.2Å resolution
Released: 13 May 2008
Model geometry
Fit model/data
2z0u
2z0u
2z0u
Entries 1 to 10 of 10
Entries 1 to 10 of 10