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X-ray diffraction
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Authors
(31)
Blumenthal RM
(7)
Cheng X
(7)
Hashimoto H
(7)
Zhang X
(7)
Jin P
(6)
Steves AN
(6)
Wang D
(6)
Blasig R
(2)
Carstanjen D
(2)
Heinemann U
(2)
Koenigsmann J
(2)
Milanovic M
(2)
Nana D
(2)
Rose C
(2)
Schuetz A
(2)
Zocher G
(2)
Choi KJ
(1)
Ferreon ACM
(1)
Ferreon JC
(1)
Kim C
(1)
Kim JJ
(1)
LaGrone A
(1)
Liu Y
(1)
MacKenzie KR
(1)
Olanrewaju YO
(1)
Park H
(1)
Quan MD
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Sankaran B
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Sharma R
(1)
Sharma S
(1)
Zheng Y
(1)
Homo / hetero assembly
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hetero
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DNA/protein complex
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trimer
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Resolution distribution
1.5 - 2
(3)
2.0 - 2.5
(7)
Release year distribution
2005 - 2010
(2)
2010 - 2015
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2015 - 2020
(6)
2020 - 2025
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Nucleic Acids Res
(7)
Cell Mol Life Sci
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Macromolecules
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Eukaryota
(10)
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Mus musculus
(9)
Homo sapiens
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Molecule name
(3)
Epithelial zinc finger protein EZF
(10)
Gut-enriched krueppel-like factor
(10)
Krueppel-like factor 4
(10)
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(10)
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Ezf
(9)
Gklf
(9)
Klf4
(9)
Zie
(9)
EZF
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GKLF
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KLF4
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Interacting Molecules
(13)
DNA (5'-D(*GP*AP*GP*GP*TP*GP*TP*GP*GP*C)-3')
(3)
DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3')
(2)
DNA (5'-D(*GP*AP*GP*GP*CP*GP*TP*GP*GP*C)-3')
(2)
DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3')
(2)
DNA (5'-D(*GP*CP*CP*AP*CP*AP*CP*CP*TP*C)-3')
(2)
DNA (5'-D(*GP*CP*CP*AP*CP*GP*CP*CP*TP*C)-3')
(2)
5'-D(*DGP*DAP*DGP*DGP*DCP*DGP*DTP* DGP*DGP*DC)-3'
(1)
5'-D(*DGP*DCP*DCP*DAP*DCP*DGP*DCP* DCP*DTP*DC)-3'
(1)
5'-D(*GP*AP*GP*GP*CP*GP*CP)-3'
(1)
5'-D(*GP*CP*GP*CP*CP*TP*CP)-3'
(1)
DNA (5'-D(*AP*GP*GP*GP*GP*GP*TP*GP*TP*GP*CP*C)-3')
(1)
DNA (5'-D(*GP*CP*CP*AP*(5CM)P*AP*CP*CP*TP*C)-3')
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DNA (5'-D(*GP*GP*CP*AP*CP*AP*CP*CP*CP*CP*CP*T)-3')
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Interacting ligands
(4)
ZN : ZINC ION
(10)
GOL : GLYCEROL
(2)
ACT : ACETATE ION
(1)
EDO : 1,2-ETHANEDIOL
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Sequence and Structure classification
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Double Stranded RNA Binding Domain
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Pfam accession / name
(1)
PF00096 : zf-C2H2
(10)
Experimental Information
Diffraction protocol
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Single wavelength
(9)
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Synchrotron
(10)
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(5)
APS BEAMLINE 22-ID
(4)
APS BEAMLINE 22-BM
(3)
ALS BEAMLINE 5.0.1
(1)
BESSY BEAMLINE 14.1
(1)
BESSY BEAMLINE 14.2
(1)
Synchrotron site
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APS
(7)
BESSY
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ALS
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CCD
(10)
Representative Structures
Representative Structures
Entries
Macromolecules
Compounds
Protein families
Entries 1 to 10 of 10
Select all entries on this page
mouse Klf4 E446P ZnF1-3 and MpG/MpG sequence DNA complex structure
Hashimoto H, Cheng X
Nucleic Acids Res
(2016)
[PMID: 27596594 ]
Source organisms: synthetic construct , Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-118905 (Preferred)
search this ID

mouse Klf4 ZnF1-3 and TpG/MpA sequence DNA complex structure
Hashimoto H, Cheng X
Nucleic Acids Res
(2016)
[PMID: 27596594 ]
Source organisms: synthetic construct , Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-118904 (Preferred)
search this ID

mouse Klf4 E446P ZnF1-3 and TpG/CpA sequence DNA complex structure
Hashimoto H, Cheng X
Nucleic Acids Res
(2016)
[PMID: 27596594 ]
Source organisms: synthetic construct , Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-118906 (Preferred)
search this ID

mouse Klf4 ZnF1-3 (E446D) and CpG/CpG sequence DNA complex structure: Form I
Hashimoto H, Cheng X
Nucleic Acids Res
(2016)
[PMID: 27596594 ]
Source organisms: synthetic construct , Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-118907 (Preferred)
search this ID

mouse Klf4 ZnF1-3 and TpG/CpA sequence DNA complex structure
Hashimoto H, Cheng X
Nucleic Acids Res
(2016)
[PMID: 27596594 ]
Source organisms: synthetic construct , Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-118903 (Preferred)
search this ID

mouse Klf4 ZnF1-3 (E446D) and CpG/CpG sequence DNA complex structure: Form II
Hashimoto H, Cheng X
Nucleic Acids Res
(2016)
[PMID: 27596594 ]
Source organisms: synthetic construct , Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-118908 (Preferred)
search this ID

Crystal structure of the zinc finger domain of Klf4 bound to its target DNA
Zocher G, Schuetz A, Carstanjen D, Heinemann U
Cell Mol Life Sci
(2011)
[PMID: 21290164 ]
Source organism: Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-115905 (Preferred)
search this ID

Crystal structure of human KLF4 zinc finger DNA binding domain in complex with NANOG DNA
Sharma R, Sharma S, Choi KJ, Ferreon ACM, Ferreon JC, Sankaran B, MacKenzie KR, Kim C
Nat Commun
(2021)
[PMID: 34552088 ]
Source organism: Homo sapiens
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-120783 (Preferred)
search this ID

Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
Liu Y, Olanrewaju YO, Blumenthal RM, Zhang X, Cheng X
Nucleic Acids Res
(2014)
[PMID: 24520114 ]
Source organisms: Synthetic construct, Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-117835 (Preferred)
search this ID

CRYSTAL STRUCTURE OF THE ZINC FINGER DOMAIN OF KLF4 BOUND TO ITS TARGET DNA
Schuetz A, Zocher G, Carstanjen D, Heinemann U
Cell Mol Life Sci
(2011)
[PMID: 21290164 ]
Source organisms: Synthetic construct, Mus musculus
Assembly composition: DNA/protein complex
Assembly name:
Krueppel-like factor 4 and DNA
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-115906 (Preferred)
search this ID

Entries 1 to 10 of 10