Uniprot accession / id : Q62417  OR   Uniprot accession / id : Q9BX66
 
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Entry Information
Entry status  (1)
REL
(11)
 
Experimental methods  (3)
Solution NMR
(5)
X-ray diffraction
(5)
X-ray powder diffraction
(1)
 
Authors  (41)
Pinotsis N
(4)
Wilmanns M
(4)
Cai G
(3)
Gong Q
(3)
Li F
(3)
Peng J
(3)
Shi Y
(3)
Sun Q
(3)
Wang C
(3)
Wang X
(3)
Wu J
(3)
Zhang J
(3)
Zhang Y
(3)
Zhang Z
(3)
Zhao D
(3)
Zuo X
(3)
Ehler E
(2)
El Banayosy A
(2)
Fitch AN
(2)
Fürst DO
(2)
Gehmlich K
(2)
Hayess K
(2)
Hu H
(2)
Jiang Y
(2)
Körfer R
(2)
Margiolaki I
(2)
Milting H
(2)
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(2)
Wright JP
(2)
Yokoyama S
(2)
Zhou C
(2)
Zhou Z
(2)
van der Ven PF
(2)
Abe H
(1)
Hayashi F
(1)
Kigawa T
(1)
Miyamoto K
(1)
Nagashima T
(1)
Qin XR
(1)
Saito K
(1)
Tochio N
(1)
 
Homo / hetero assembly  (2)
homo
(8)
hetero
(3)
 
Assembly composition  (2)
protein structure
(8)
protein/protein complex
(3)
 
Assembly polymer count  (2)
monomer
(8)
dimer
(3)
 
Resolution distribution
0.5 - 1
(2)
1.0 - 1.5
(2)
1.5 - 2
(1)
2.0 - 2.5
(1)
 
Release year distribution
2005 - 2010
(6)
2010 - 2015
(5)
 
Journal  (4)
To be published
(4)
J Struct Biol
(3)
J Am Chem Soc
(2)
J Mol Biol
(2)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(11)
 
Organism name  (1)
Homo sapiens
(11)
 
Molecule name  (6)
CAP
(11)
Ponsin
(11)
SH3 domain protein 5
(11)
SH3P12
(11)
Sorbin and SH3 domain-containing protein 1
(11)
c-Cbl-associated protein
(11)
 
Molecule type  (1)
Protein
(11)
 
Gene names  (4)
KIAA0894
(11)
KIAA1296
(11)
SH3D5
(11)
SORBS1
(11)
 
Interacting Molecules  (2)
Vinculin
(2)
Paxillin
(1)
 
Interacting ligands  (4)
CL : CHLORIDE ION
(1)
FMT : FORMIC ACID
(1)
NA : SODIUM ION
(1)
SCN : THIOCYANATE ION
(1)
 
Sequence and Structure classification
CATH class  (1)
Mainly Beta
(10)
 
CATH topology  (1)
SH3 type barrels.
(10)
 
Pfam accession / name  (3)
PF00018 : SH3_1
(7)
PF07653 : SH3_2
(3)
PF14604 : SH3_9
(2)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(6)
 
Diffraction radiation source type  (1)
Synchrotron
(6)
 
Diffraction source  (3)
EMBL/DESY, HAMBURG BEAMLINE X11
(3)
SSRF BEAMLINE BL17U
(2)
ESRF BEAMLINE ID13
(1)
 
Synchrotron site  (3)
EMBL/DESY, Hamburg
(3)
SSRF
(2)
ESRF
(1)
 
Diffraction detector type  (2)
CCD
(5)
Scinillator
(1)
 
Refinement software  (3)
REFMAC
(4)
GSAS
(1)
SHELXL-97
(1)
 
NMR
NMR software packages  (10)
ARIA
(2)
CYANA
(2)
KUJIRA
(2)
NMRPipe
(2)
NMRView
(2)
CNS
(1)
Sparky
(1)
VNMR
(1)
Xplor-NIH
(1)
XwinNMR
(1)
 
NMR Field Strength
400.0 - 500
(1)
500.0 - 600
(3)
600.0 - 700
(3)
700.0 - 800
(2)
800.0 - 900
(2)
900.0 - 1000
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 10 of 11
Entries 1 to 10 of 11
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Extending powder diffraction to proteins: structure solution of the second SH3 domain from ponsin
Pinotsis N, Margiolaki I
J Am Chem Soc (2007) [PMID: 17784760  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Sorbin and SH3 domain-containing protein 1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-189781 (Preferred)   search this ID
PDBe-KB: Q9BX66   
X-ray powder diffraction
2.27Å resolution
Released: 23 Oct 2007
Model geometry
Fit model/data
Data not analysed
2o2w
2o2w
2o2w
The second SH3 domain from ponsin
Pinotsis N, Wilmanns M
J Mol Biol (2007) [PMID: 17462669  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: NA    CL    SCN    NA   
Assembly name: Sorbin and SH3 domain-containing protein 1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-189781 (Preferred)   search this ID
PDBe-KB: Q9BX66   
X-ray diffraction
0.83Å resolution
Released: 30 Oct 2007
Model geometry
Fit model/data
2o9s
2o9s
2o9s
The third SH3 domain of R85FL
Jiang Y, Hu H
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Sorbin and SH3 domain-containing protein 1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-189781 (Preferred)   search this ID
PDBe-KB: Q9BX66   
Solution NMR
Released: 5 Sep 2012
Model geometry
Fit model/data
Data not analysed
2lj0
2lj0
2lj0
Crystal structure of the second SH3 domain from ponsin
Pinotsis N, Wilmanns M, Margiolaki I
J Am Chem Soc (2007) [PMID: 17784760  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: FMT    FMT   
Assembly name: Sorbin and SH3 domain-containing protein 1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-189781 (Preferred)   search this ID
PDBe-KB: Q9BX66   
X-ray diffraction
1.5Å resolution
Released: 23 Oct 2007
Model geometry
Fit model/data
2o31
2o31
2o31
The second SH3 domain from Ponsin in complex with the paxillin proline rich region
Pinotsis N, Wilmanns M
J Mol Biol (2007) [PMID: 17462669  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Assembly name: Sorbin and SH3 domain-containing protein 1 and Paxillin (Preferred)   search this complex
PDBe complex ID: PDB-CPX-155832 (Preferred)   search this ID
PDBe-KB: Q9BX66    P49023   
X-ray diffraction
1.63Å resolution
Released: 30 Oct 2007
Model geometry
Fit model/data
2o9v
2o9v
2o9v
Solution structure of the first SH3 domain of human sorbin and Sh3 domain-containing protein 1
Qin XR, Nagashima T, Hayashi F, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Sorbin and SH3 domain-containing protein 1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-189781 (Preferred)   search this ID
PDBe-KB: Q9BX66   
Solution NMR
Released: 17 Oct 2006
Model geometry
Fit model/data
Data not analysed
2dl3
2dl3
2dl3
Solution structure of the SH3 domain of Sorbin and SH3 domain-containing protein 1
Abe H, Miyamoto K, Tochio N, Saito K, Kigawa T, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Sorbin and SH3 domain-containing protein 1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-189781 (Preferred)   search this ID
PDBe-KB: Q9BX66   
Solution NMR
Released: 26 Feb 2008
Model geometry
Fit model/data
Data not analysed
2ecz
2ecz
2ecz
The first SH3 domain from CAP/Ponsin in complex with proline rich peptide from Vinculin
Zhao D, Li F, Wu J, Shi Y, Zhang Z, Gong Q
J Struct Biol (2014) [PMID: 24878663  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Assembly name: Sorbin and SH3 domain-containing protein 1 and Vinculin (Preferred)   search this complex
PDBe complex ID: PDB-CPX-148325 (Preferred)   search this ID
PDBe-KB: Q9BX66    P18206   
X-ray diffraction
1.41Å resolution
Released: 28 May 2014
Model geometry
Fit model/data
4lnp
4lnp
4lnp
solution structure of tandem SH3 domain of Sorbin and SH3 domain-containing protein 1
Zhao D, Wang C, Zhang J, Wu J, Shi Y, Zhang Z, Gong Q
J Struct Biol (2014) [PMID: 24878663  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Sorbin and SH3 domain-containing protein 1 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-189781 (Preferred)   search this ID
PDBe-KB: Q9BX66   
Solution NMR
Released: 28 May 2014
Model geometry
Fit model/data
Data not analysed
2mox
2mox
2mox
The second SH3 domain from CAP/Ponsin in complex with proline rich peptide from Vinculin
Zhao D, Li F, Wu J, Shi Y, Zhang Z, Gong Q
J Struct Biol (2014) [PMID: 24878663  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Assembly name: Sorbin and SH3 domain-containing protein 1 and Vinculin (Preferred)   search this complex
PDBe complex ID: PDB-CPX-148325 (Preferred)   search this ID
PDBe-KB: Q9BX66    P18206   
X-ray diffraction
1Å resolution
Released: 28 May 2014
Model geometry
Fit model/data
4ln2
4ln2
4ln2
Entries 1 to 10 of 11
Entries 1 to 10 of 11