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(1)
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(2)
X-ray diffraction
(18)
Solution NMR
(1)
Authors
(89)
Barton MC
(13)
Shi X
(13)
Andersen JN
(8)
Bardenhagen JP
(8)
Draetta G
(8)
Geck Do M
(8)
Jones P
(8)
Kost-Alimova M
(8)
Leo E
(8)
Liu G
(8)
Palmer W
(8)
Palmer WS
(8)
Petrocchi A
(8)
Poncet-Montange G
(8)
Reyna N
(8)
Shepard HE
(8)
Subramanian G
(8)
Theroff J
(8)
Tieu TN
(8)
Toniatti C
(8)
Yau A
(8)
Zhan Y
(8)
Zhao S
(8)
Akdemir KC
(5)
Aronow B
(5)
Fischle W
(5)
Gozani O
(5)
Hung MC
(5)
Patel DJ
(5)
Plunkett W
(5)
Schwarzer D
(5)
Tsai CY
(5)
Tsai WW
(5)
Wang Z
(5)
Winter S
(5)
Xia W
(5)
Yiu TT
(5)
Bao H
(3)
Gao J
(3)
Jiang Y
(3)
Li F
(3)
Liu J
(3)
Ma R
(3)
Ruan K
(3)
Wu J
(3)
Zhang S
(3)
Arrowsmith CH
(1)
Baronio R
(1)
Bennett JM
(1)
Bobby R
(1)
Bountra C
(1)
Brennan PE
(1)
Clark PG
(1)
Clark PGK
(1)
Daniels DL
(1)
Dixon DJ
(1)
Edwards AM
(1)
Fedorov O
(1)
Hitchin JR
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Kaderli J
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Kishishita S
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Knapp S
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Krojer T
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Mendez J
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Milbradt AG
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Monteiro OP
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Muller S
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Murayama K
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Nunez-Alonso G
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Orts J
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Packer MJ
(1)
Picaud S
(1)
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(1)
Rogers CM
(1)
Rossi E
(1)
Sarda S
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Shirouzu M
(1)
Singleton DC
(1)
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Tallant C
(1)
Terada T
(1)
Torres F
(1)
Uchikubo-Kamo T
(1)
Vieira LC
(1)
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(1)
Walker G
(1)
Walser R
(1)
Yokoyama S
(1)
von Delft F
(1)
Homo / hetero assembly
(2)
homo
(15)
hetero
(4)
Assembly composition
(2)
protein structure
(15)
protein/protein complex
(4)
Assembly polymer count
(2)
monomer
(14)
dimer
(5)
Resolution distribution
1.0 - 1.5
(1)
1.5 - 2
(13)
2.0 - 2.5
(4)
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2005 - 2010
(6)
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(14)
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(12)
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(1)
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(9)
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(2)
Macromolecules
Organism superkingdom
(1)
Eukaryota
(19)
Organism name
(1)
Homo sapiens
(19)
Molecule name
(6)
E3 ubiquitin-protein ligase TRIM24
(19)
RING finger protein 82
(19)
RING-type E3 ubiquitin transferase TIF1-alpha
(19)
TIF1-alpha
(19)
Transcription intermediary factor 1-alpha
(19)
Tripartite motif-containing protein 24
(19)
Molecule type
(1)
Protein
(19)
Gene names
(4)
RNF82
(19)
TIF1
(19)
TIF1A
(19)
TRIM24
(19)
Interacting Molecules
(2)
Histone H3.1
(3)
Histone H4
(1)
Interacting ligands
(18)
ZN : ZINC ION
(17)
DMS : DIMETHYL SULFOXIDE
(5)
GOL : GLYCEROL
(4)
SO4 : SULFATE ION
(4)
1PE : PENTAETHYLENE GLYCOL
(1)
4A7 : 2,4-dimethoxy-N-(1-methyl-2-oxo-1,2,3,4-tetrahydroquinolin-6-yl)benzenesulfonamide
(1)
4A8 : N-(1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)-4-methoxybenzenesulfonamide
(1)
4AE : N-[6-(4-methoxyphenoxy)-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl]benzenesulfonamide
(1)
4BJ : N-{6-[3-(benzyloxy)phenoxy]-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl}-3,4-dimethoxybenzenesulfonamide
(1)
4BK : N-{1,3-dimethyl-6-[3-(2-methylpropoxy)phenoxy]-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl}-1,2-dimethyl-1H-imidazole-4-sulfonamide
(1)
4BV : N-(1,3-dimethyl-2-oxo-6-{3-[(3S)-tetrahydrofuran-3-ylmethoxy]phenoxy}-2,3-dihydro-1H-benzimidazol-5-yl)-1-methyl-1H-imidazole-4-sulfonamide
(1)
4C1 : N-(6-{3-[4-(dimethylamino)butoxy]-5-propoxyphenoxy}-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)-3,4-dimethoxybenzenesulfonamide
(1)
4CN : 1-methyl-5-(2-methyl-1,3-thiazol-4-yl)-1,3-dihydro-2H-indol-2-one
(1)
4QH : 3,4-dimethoxy-N-[6-(4-methoxyphenoxy)-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl]benzenesulfonamide
(1)
6KT : 2-amino-1,3-benzothiazole-6-carboxamide
(1)
7FF : methyl 6-azanyl-3,4-dihydro-2H-quinoline-1-carboxylate
(1)
7FU : 2-Hydrazino-1,3-benzothiazole-6-carbohydrazide
(1)
T52 : N-{6-[3-(4-Aminobutoxy)-5-propoxyphenoxy]-1,3-dimethyl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl}-3,4-dimethoxybenzene-1-sulfonamide
(1)
Function and Biology
EC number / name
(1)
2.3.2.27 : RING-type E3 ubiquitin transferase
(19)
Sequence and Structure classification
CATH class
(2)
Mainly Alpha
(18)
Alpha Beta
(17)
CATH topology
(2)
Histone Acetyltransferase; Chain A
(18)
Herpes Virus-1
(17)
Pfam accession / name
(2)
PF00439 : Bromodomain
(19)
PF00628 : PHD
(17)
Experimental Information
Diffraction protocol
(2)
Single wavelength
(17)
MAD
(1)
Diffraction radiation source type
(1)
Synchrotron
(18)
Diffraction source
(6)
ALS BEAMLINE 8.3.1
(8)
APS BEAMLINE 24-ID-E
(4)
SSRF BEAMLINE BL19U1
(3)
DIAMOND BEAMLINE I02
(1)
NSLS BEAMLINE X29A
(1)
SPRING-8 BEAMLINE BL26B2
(1)
Synchrotron site
(6)
ALS
(8)
APS
(4)
SSRF
(3)
Diamond
(1)
NSLS
(1)
SPring-8
(1)
Diffraction detector type
(2)
CCD
(14)
Pixel
(4)
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(3)
REFMAC
(9)
CNS
(6)
PHENIX
(3)
NMR
NMR software packages
(3)
CARA
(1)
CNS
(1)
CYANA
(1)
NMR Field Strength
700.0 - 800
(1)
800.0 - 900
(1)
Representative Structures
Representative Structures
Entries
Macromolecules
Compounds
Protein families
Entries 1 to 10 of 19
Select all entries on this page
Complex structure of TRIM24 PHD-bromodomain and inhibitor 1
Liu J
FEBS J
(2017)
[PMID: 28207202 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127337 (Preferred)
search this ID

Complex structure of TRIM24 PHD-bromodomain and inhibitor 2
Liu J
FEBS J
(2017)
[PMID: 28207202 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127337 (Preferred)
search this ID

Complex structure of TRIM24 PHD-bromodomain and inhibitor 6
Liu J
FEBS J
(2017)
[PMID: 28207202 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127337 (Preferred)
search this ID

NMR2 structure of TRIM24-BD in complex with a precursor of IACS-9571
Orts J, Torres F, Milbradt AG, Walser R
J Med Chem
(2022)
[PMID: 35357834 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Bound ligands:
T52
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127337 (Preferred)
search this ID

Crystal structure of TRIM24 PHD-bromodomain complexed with N-{6-[3-(benzyloxy)phenoxy]-1,3-dimethyl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl}-3,4-dimethoxybenzene-1-sulfonamide (7b)
Poncet-Montange G, Palmer W, Jones P
J Med Chem
(2016)
[PMID: 26061247 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127337 (Preferred)
search this ID

Crystal structure of TRIM24 PHD-Bromo complexed with H3(13-32)K23ac peptide
Wang Z, Patel DJ
Nature
(2010)
[PMID: 21164480 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Transcription intermediary factor 1-alpha and Histone H3.1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127339 (Preferred)
search this ID
Crystal structure of TRIM24 PHD-Bromo complexed with H4(14-19)K16ac peptide
Wang Z, Patel DJ
Nature
(2010)
[PMID: 21164480 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Histone H4 and Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127338 (Preferred)
search this ID
Crystal structure of TRIM24 PHD-bromodomain complexed with N-[6-(4-methoxyphenoxy)-1,3-dimethyl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl]benzenesulfonamide (5g)
Poncet-Montange G, Palmer W, Jones P
J Med Chem
(2016)
[PMID: 26061247 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127337 (Preferred)
search this ID

Crystal structure of TRIM24 PHD-bromodomain complexed with N-{1,3-dimethyl-2-oxo-6-[3-(oxolan-3-ylmethoxy)phenoxy]-2,3-dihydro-1H-1,3-benzodiazol-5-yl}-1-methyl-1H-imidazole-4-sulfonamide (7l)
Poncet-Montange G, Palmer W, Jones P
J Med Chem
(2016)
[PMID: 26061247 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127337 (Preferred)
search this ID

Crystal structure of human bromodomain protein
Kishishita S, Uchikubo-Kamo T, Murayama K, Terada T, Shirouzu M, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Transcription intermediary factor 1-alpha
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-127340 (Preferred)
search this ID

Entries 1 to 10 of 19