Uniprot accession / id : Q80ZM5  OR   Uniprot accession / id : Q92522
 
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Entry Information
Entry status  (1)
REL
(5)
 
Experimental methods  (3)
Electron Microscopy
(2)
X-ray diffraction
(2)
Solution NMR
(1)
 
Authors  (31)
Adhireksan Z
(2)
Bai Y
(2)
Davey CA
(2)
Feng H
(2)
Fox T
(2)
Ghirlando R
(2)
Kale S
(2)
Khant H
(2)
Lee PL
(2)
Padavattan S
(2)
Panchenko AR
(2)
Sharma D
(2)
Zhou B-R
(2)
Zhou BR
(2)
de Val N
(2)
Acton TB
(1)
Bao Q
(1)
Davey GE
(1)
Eletsky A
(1)
Everett JK
(1)
Janjua H
(1)
Kohan E
(1)
Lee D
(1)
Lee H
(1)
Montelione GT
(1)
Northeast Structural Genomics Consortium (NESG)
(1)
Prestegard JH
(1)
Qiuye B
(1)
Shum WK
(1)
Szyperski T
(1)
Xiao R
(1)
 
Homo / hetero assembly  (2)
hetero
(4)
homo
(1)
 
Assembly composition  (2)
DNA/protein complex
(4)
protein structure
(1)
 
Assembly polymer count  (4)
tridecamer
(2)
22-mer
(1)
monomer
(1)
nonadecamer
(1)
 
Resolution distribution
2.0 - 2.5
(1)
2.5 - 3
(1)
3.0 - 3.5
(2)
 
Release year distribution
2010 - 2015
(1)
2015 - 2020
(2)
2020 - 2025
(4)
 
Journal  (3)
Mol Cell
(2)
To be published
(2)
Nucleic Acids Res
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(5)
 
Organism name  (1)
Homo sapiens
(5)
 
Molecule name  (5)
Histone H1.10
(5)
Histone H1x
(5)
Histone H1.4
(1)
Histone H1b
(1)
Histone H1s-4
(1)
 
Molecule type  (1)
Protein
(5)
 
Gene names  (5)
H1-10
(5)
H1FX
(5)
H1-4
(1)
H1F4
(1)
HIST1H1E
(1)
 
Interacting Molecules  (8)
Histone H2A type 1-B/E
(4)
Histone H2B type 1-J
(4)
Histone H3.1
(4)
Histone H4
(4)
DNA (197-MER)
(2)
scFv20
(2)
DNA (169-MER)
(1)
DNA (338-MER)
(1)
 
Function and Biology
Biological function  (6)
DNA binding
(5)
structural constituent of chromatin
(4)
RNA binding
(3)
cadherin binding
(3)
double-stranded DNA binding
(3)
nucleosomal DNA binding
(3)
 
Biological process  (3)
nucleosome assembly
(5)
chromosome condensation
(3)
negative regulation of DNA recombination
(3)
 
Biological cell component  (5)
nucleosome
(5)
chromosome
(3)
nucleolus
(3)
nucleoplasm
(3)
nucleus
(3)
 
Sequence and Structure classification
CATH class  (1)
Mainly Alpha
(1)
 
CATH topology  (1)
Arc Repressor Mutant, subunit A
(1)
 
Pfam accession / name  (1)
PF00538 : Linker_histone
(5)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(2)
 
Diffraction radiation source type  (1)
Synchrotron
(2)
 
Diffraction source  (1)
SLS BEAMLINE X06DA
(2)
 
Synchrotron site  (1)
SLS
(2)
 
Diffraction detector type  (1)
Pixel
(2)
 
Refinement software  (2)
PHENIX
(2)
REFMAC
(2)
 
EM microscope model  (1)
FEI TITAN KRIOS
(2)
 
EM detector name  (1)
GATAN K2 SUMMIT (4k x 4k)
(2)
 
NMR
NMR software packages  (11)
ASDP
(1)
CARA
(1)
CNS
(1)
CYANA
(1)
NMRPipe
(1)
PINE
(1)
PSVS
(1)
Sparky
(1)
TALOS+
(1)
VnmrJ
(1)
XEASY
(1)
 
NMR Field Strength
500.0 - 600
(1)
600.0 - 700
(1)
700.0 - 800
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 5 of 5
Entries 1 to 5 of 5
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Cryo-EM structure of a chromatosome containing chimeric linker histone gH1.10-ncH1.4
Zhou B-R, Bai Y
Mol Cell (2021) [PMID: 33238161  ]
Assembly composition: DNA/protein complex
Assembly name: Nucleosome, variant H3.1-H2A.2-H2B.1 and Histone H1.10, Histone H1.4 and DNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-207799 (Preferred)   search this ID
PDBe-KB: P10412    Q92522    P62805    P06899    P68431    P04908   
Electron Microscopy
3.03Å resolution
Released: 25 Nov 2020
Model geometry
Fit model/data
Data not analysed
7k63
7k63
7k63
338 bp di-nucleosome assembled with linker histone H1.X
Adhireksan Z, Sharma D, Lee PL, Davey CA
Nucleic Acids Res (2021) [PMID: 33590100  ]
Assembly composition: DNA/protein complex
Bound ligands: K    CA    K    CA    CL   
Assembly name: Nucleosome, Histone and DNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-120200 (Preferred)   search this ID
PDBe-KB: Q92522    P62805    P06899    P68431    P04908   
X-ray diffraction
2.5Å resolution
Released: 17 Feb 2021
Model geometry
Fit model/data
6l9z
6l9z
6l9z
Crystal Structure of Nucleosome-H1x Linker Histone Assembly (sticky-169a DNA fragment)
Adhireksan Z, Qiuye B, Padavattan S, Davey CA
To be published
Assembly composition: DNA/protein complex
Bound ligands: K    CA    K    CA    CL   
Assembly name: Nucleosome, Histone and DNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-271019 (Preferred)   search this ID
PDBe-KB: Q92522    P62805    P06899    P68431    P04908   
X-ray diffraction
2.7Å resolution
Released: 3 Apr 2024
Model geometry
Fit model/data
8yti
8yti
8yti
Cryo-EM structure of a chromatosome containing human linker histone H1.10
Zhou B-R, Bai Y
Mol Cell (2021) [PMID: 33238161  ]
Assembly composition: DNA/protein complex
Assembly name: Nucleosome, variant H3.1-H2A.2-H2B.1 and Histone H1.10 and DNA (Preferred)   search this complex
PDBe complex ID: PDB-CPX-207797 (Preferred)   search this ID
PDBe-KB: Q92522    P62805    P06899    P68431    P04908   
Electron Microscopy
3.12Å resolution
Released: 25 Nov 2020
Model geometry
Fit model/data
Data not analysed
7k60
7k60
7k60
Solution NMR Structure of the Globular Domain of Human Histone H1x, Northeast Structural Genomics Consortium (NESG) Target HR7057A
Eletsky A, Lee H, Lee D, Kohan E, Janjua H, Xiao R, Acton TB, Everett JK, Montelione GT, Prestegard JH, Szyperski T, Northeast Structural Genomics Consortium (NESG)
To be published
Source organism: Homo sapiens  
Assembly composition: protein only structure
Assembly name: Histone H1.10 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-187674 (Preferred)   search this ID
PDBe-KB: Q92522   
Solution NMR
Released: 13 Jun 2012
Model geometry
Fit model/data
Data not analysed
2lso
2lso
2lso
Entries 1 to 5 of 5
Entries 1 to 5 of 5