Uniprot accession / id : Q9D7S9  OR   Uniprot accession / id : Q9NZZ3
 
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Entry Information
Entry status  (1)
REL
(6)
 
Experimental methods  (2)
X-ray diffraction
(5)
Solution NMR
(1)
 
Authors  (26)
Bello NF
(4)
Bouamr F
(4)
Chuenchor W
(4)
Dussupt V
(4)
Jiang J
(4)
Jiang JS
(4)
Mu R
(4)
Mu RL
(4)
Rudd V
(4)
Sette P
(4)
Xiao T
(4)
Xiao TS
(4)
Arii J
(1)
Bajorek M
(1)
Guo EZ
(1)
Katsuyama A
(1)
Li Y
(1)
Liu Y
(1)
Myszka DG
(1)
Skalicky JJ
(1)
Stubblefield WM
(1)
Sundquist WI
(1)
Uter NT
(1)
Vild CJ
(1)
Wenzel DM
(1)
Xu Z
(1)
 
Homo / hetero assembly  (1)
hetero
(6)
 
Assembly composition  (1)
protein/protein complex
(6)
 
Assembly polymer count  (3)
dimer
(3)
tetramer
(2)
trimer
(1)
 
Resolution distribution
0.5 - 1
(1)
2.5 - 3
(3)
3.0 - 3.5
(1)
 
Release year distribution
2010 - 2015
(6)
2015 - 2020
(1)
 
Journal  (2)
Structure
(4)
J Biol Chem
(2)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(6)
 
Organism name  (1)
Homo sapiens
(6)
 
Molecule name  (6)
Charged multivesicular body protein 5
(6)
Chromatin-modifying protein 5
(6)
SNF7 domain-containing protein 2
(6)
Vacuolar protein sorting-associated protein 60
(6)
Vps60
(6)
hVps60
(6)
 
Molecule type  (1)
Protein
(6)
 
Gene names  (7)
C9orf83
(6)
CGI-34
(6)
CHMP5
(6)
HSPC177
(6)
PNAS-114
(6)
PNAS-2
(6)
SNF7DC2
(6)
 
Interacting Molecules  (3)
BRO1 domain-containing protein BROX
(4)
Vacuolar protein sorting-associated protein VTA1 homolog
(2)
Charged multivesicular body protein 1b
(1)
 
Interacting ligands  (1)
EDO : 1,2-ETHANEDIOL
(1)
 
Function and Biology
Biological process  (1)
vacuolar transport
(2)
 
Sequence and Structure classification
Pfam accession / name  (1)
PF03357 : Snf7
(2)
 
Experimental Information
Diffraction protocol  (1)
Single wavelength
(5)
 
Diffraction radiation source type  (1)
Synchrotron
(5)
 
Diffraction source  (2)
NSLS BEAMLINE X29A
(4)
APS BEAMLINE 21-ID-D
(1)
 
Synchrotron site  (2)
NSLS
(4)
APS
(1)
 
Diffraction detector type  (1)
CCD
(5)
 
Refinement software  (1)
PHENIX
(5)
 
NMR
NMR software packages  (2)
Sparky
(1)
Xplor-NIH
(1)
 
NMR Field Strength
500.0 - 600
(1)
600.0 - 700
(1)
800.0 - 900
(1)
900.0 - 1000
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 6 of 6
Entries 1 to 6 of 6
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Crystal structure of LIP5 N-terminal domain complexed with CHMP1B MIM and CHMP5 MIM
Vild CJ, Xu Z
J Biol Chem (2015) [PMID: 25637630  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: ACT    EDO    ACT   
PDBe complex ID: PDB-CPX-181643 (Preferred)   search this ID
PDBe-KB: Q9NZZ3    Q9NP79    Q7LBR1   
X-ray diffraction
1Å resolution
Released: 11 Feb 2015
Model geometry
Fit model/data
4txr
4txr
4txr
Lip5-chmp5
Skalicky JJ, Sundquist WI
J Biol Chem (2012) [PMID: 23105106  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Assembly name: Vacuolar protein sorting-associated protein VTA1 homolog and Charged multivesicular body protein 5 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-192461 (Preferred)   search this ID
PDBe-KB: Q9NZZ3    Q9NP79   
Solution NMR
Released: 28 Nov 2012
Model geometry
Fit model/data
Data not analysed
2lxm
2lxm
2lxm
Crystal structure of the Brox Bro1 domain in complex with the C-terminal tail of CHMP5
Jiang JS, Mu RL, Xiao T
Structure (2012) [PMID: 22484091  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: GOL   
Assembly name: Charged multivesicular body protein 5 and BRO1 domain-containing protein BROX (Preferred)   search this complex
PDBe complex ID: PDB-CPX-178446 (Preferred)   search this ID
PDBe-KB: Q9NZZ3    Q5VW32   
X-ray diffraction
2.589Å resolution
Released: 18 Apr 2012
Model geometry
Fit model/data
3um2
3um2
3um2
Crystal structure of the Brox Bro1 domain in complex with the C-terminal tail of CHMP5
Jiang JS, Mu RL, Xiao T
Structure (2012) [PMID: 22484091  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: GOL   
Assembly name: Charged multivesicular body protein 5 and BRO1 domain-containing protein BROX (Preferred)   search this complex
PDBe complex ID: PDB-CPX-178445 (Preferred)   search this ID
PDBe-KB: Q9NZZ3    Q5VW32   
X-ray diffraction
3.102Å resolution
Released: 18 Apr 2012
Model geometry
Fit model/data
3um0
3um0
3um0
Crystal structure of the Brox Bro1 domain in complex with the C-terminal tail of CHMP5
Jiang JS, Mu RL, Xiao T
Structure (2012) [PMID: 22484091  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: GOL   
Assembly name: Charged multivesicular body protein 5 and BRO1 domain-containing protein BROX (Preferred)   search this complex
PDBe complex ID: PDB-CPX-178446 (Preferred)   search this ID
PDBe-KB: Q9NZZ3    Q5VW32   
X-ray diffraction
2.708Å resolution
Released: 18 Apr 2012
Model geometry
Fit model/data
3um1
3um1
3um1
Crystal Structure of BROX Bro1 Domain in Complex with the C-Terminal Tails of CHMP5
Jiang JS, Mu RL, Xiao T
Structure (2012) [PMID: 22484091  ]
Source organism: Homo sapiens  
Assembly composition: protein/protein complex
Bound ligands: GOL   
Assembly name: Charged multivesicular body protein 5 and BRO1 domain-containing protein BROX (Preferred)   search this complex
PDBe complex ID: PDB-CPX-178445 (Preferred)   search this ID
PDBe-KB: Q9NZZ3    Q5VW32   
X-ray diffraction
2.6Å resolution
Released: 18 Apr 2012
Model geometry
Fit model/data
3uly
3uly
3uly
Entries 1 to 6 of 6
Entries 1 to 6 of 6