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Entry status
(1)
Experimental methods
(3)
X-ray diffraction
(8)
Solution NMR
(2)
Electron Microscopy
(1)
Authors
(52)
Fletcher GC
(2)
Humbert PO
(2)
Ivanova ME
(2)
Javorsky A
(2)
Kvansakul M
(2)
Li Y
(2)
McDonald NQ
(2)
O'Reilly N
(2)
Purkiss AG
(2)
Thompson BJ
(2)
Zhang M
(2)
Alvarez F
(1)
Boeda B
(1)
Boëda B
(1)
Brule S
(1)
Brûlé S
(1)
Cai Y
(1)
Caillet-Saguy C
(1)
Chai J
(1)
Demeler B
(1)
Du Q
(1)
Etienne-Manneville S
(1)
Feng W
(1)
Haouz A
(1)
Hayashi F
(1)
Karnak D
(1)
Lavie A
(1)
Liu Q
(1)
Long J
(1)
Long J-F
(1)
Long JF
(1)
Margolis B
(1)
McSweeney S
(1)
Mechaly A
(1)
Neitthoffer B
(1)
Pang C
(1)
Qin X-R
(1)
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(1)
Shanklin J
(1)
Shen Y
(1)
Wan Q
(1)
Wang L
(1)
Wang Z
(1)
Wei Z
(1)
Wolff N
(1)
Xie X
(1)
Yan Y
(1)
Yang X
(1)
Yokoyama S
(1)
Zhang J
(1)
Zhou H
(1)
Zhu Y
(1)
Homo / hetero assembly
(2)
hetero
(8)
homo
(3)
Assembly composition
(2)
protein/protein complex
(8)
protein structure
(3)
Assembly polymer count
(5)
dimer
(5)
monomer
(3)
pentamer
(1)
tetramer
(1)
trimer
(1)
Resolution distribution
1.0 - 1.5
(1)
1.5 - 2
(3)
2.0 - 2.5
(2)
2.5 - 3
(2)
3.5 - 4
(1)
Release year distribution
2000 - 2005
(3)
2005 - 2010
(2)
2010 - 2015
(4)
2015 - 2020
(2)
2020 - 2025
(4)
Journal
(8)
Acta Crystallogr D Biol Crystallogr
(2)
Commun Biol
(2)
Proc Natl Acad Sci U S A
(2)
EMBO J
(1)
Front Microbiol
(1)
J Biol Chem
(1)
Nat Commun
(1)
To be published
(1)
Macromolecules
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(1)
Eukaryota
(11)
Organism name
(3)
Homo sapiens
(9)
Mus musculus
(3)
Rattus norvegicus
(1)
Molecule name
(15)
MAGUK p55 subfamily member 5
(11)
Protein PALS1
(11)
Protein associated with Lin-7 1
(11)
Membrane protein, palmitoylated 5
(9)
Channel-interacting PDZ domain-containing protein
(1)
InaD-like protein
(1)
Inadl protein
(1)
Lin-7B
(1)
MALS-2
(1)
Mammalian lin-seven protein 2
(1)
Pals1-associated tight junction protein
(1)
Protein associated to tight junctions
(1)
Protein lin-7 homolog B
(1)
Veli-2
(1)
Vertebrate lin-7 homolog 2
(1)
Molecule type
(1)
Protein
(11)
Gene names
(10)
MPP5
(9)
PALS1
(9)
Mpp5
(2)
Pals1
(2)
Cipp
(1)
Inadl
(1)
Lin7b
(1)
Mals2
(1)
Patj
(1)
Veli2
(1)
Interacting Molecules
(5)
Envelope small membrane protein
(4)
InaD-like protein
(1)
Multiple PDZ domain protein
(1)
Protein crumbs
(1)
Protein crumbs homolog 1
(1)
Interacting ligands
(7)
ACT : ACETATE ION
(2)
CL : CHLORIDE ION
(2)
EDO : 1,2-ETHANEDIOL
(1)
FLC : CITRATE ANION
(1)
GOL : GLYCEROL
(1)
NA : SODIUM ION
(1)
PUN : 2,2,4,4,6,6,8-heptamethylnonane
(1)
Sequence and Structure classification
SCOP fold
(2)
L27 domain
(2)
PDZ domain-like
(1)
SCOP family
(2)
L27 domain
(2)
PDZ domain
(1)
CATH class
(3)
Mainly Beta
(4)
Mainly Alpha
(3)
Alpha Beta
(1)
CATH topology
(6)
Pdz3 Domain
(4)
Helix Hairpins
(2)
Rossmann fold
(1)
SH3 type barrels.
(1)
Substrate Binding Domain Of Dnak; Chain:A; Domain 2
(1)
de novo design (two linked rop proteins)
(1)
Pfam accession / name
(6)
PF00595 : PDZ
(8)
PF09060 : L27_N
(3)
PF00625 : Guanylate_kin
(2)
PF07653 : SH3_2
(2)
PF02828 : L27
(1)
PF09045 : L27_2
(1)
Experimental Information
Diffraction protocol
(1)
Single wavelength
(10)
Diffraction radiation source type
(1)
Synchrotron
(8)
Diffraction source
(5)
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
(2)
DIAMOND BEAMLINE I04-1
(2)
SSRF BEAMLINE BL17U
(2)
APS BEAMLINE 22-ID
(1)
SOLEIL BEAMLINE PROXIMA 2
(1)
Synchrotron site
(5)
Australian Synchrotron
(2)
Diamond
(2)
SSRF
(2)
APS
(1)
SOLEIL
(1)
Diffraction detector type
(2)
Pixel
(5)
CCD
(3)
Refinement software
(3)
PHENIX
(7)
BUSTER
(1)
CNS
(1)
EM microscope model
(1)
FEI TITAN KRIOS
(1)
EM detector name
(1)
GATAN K3 BIOQUANTUM (6k x 4k)
(1)
NMR
NMR software packages
(6)
CNS
(1)
CYANA
(1)
KUJIRA
(1)
NMRPipe
(1)
NMRView
(1)
VNMR
(1)
NMR Field Strength
700.0 - 800
(2)
800.0 - 900
(1)
Representative Structures
Representative Structures
Entries
Macromolecules
Compounds
Protein families
Entries 1 to 10 of 11
Select all entries on this page
PALS1/MPP5 PDZ domain in complex with SARS-CoV-2_E PBM peptide
Zhu Y, Alvarez F, Haouz A, Mechaly A, Caillet-Saguy C
Front Microbiol
(2022)
[PMID: 35283834 ]
Source organisms: Homo sapiens , Severe acute respiratory syndrome coronavirus 2
Assembly composition: protein/protein complex
Assembly name:
Envelope small membrane protein and Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-144988 (Preferred)
search this ID
PALS1 PDZ1 domain with SARS-CoV-2_E PBM complex
Javorsky A, Kvansakul M
Commun Biol
(2021)
[PMID: 34117354 ]
Source organisms: Homo sapiens , Severe acute respiratory syndrome coronavirus 2
Assembly composition: protein/protein complex
Assembly name:
Envelope small membrane protein and Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-144984 (Preferred)
search this ID
PALS1 PDZ1 domain with SARS-CoV-1_E PBM complex
Javorsky A, Kvansakul M
Commun Biol
(2021)
[PMID: 34117354 ]
Source organisms: Severe acute respiratory syndrome-related coronavirus , Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Envelope small membrane protein and Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-157832 (Preferred)
search this ID
Structural basis for SARS-CoV-2 envelope protein in recognition of human cell junction protein PALS1
Liu Q, Chai J
Nat Commun
(2021)
[PMID: 34103506 ]
Source organisms: Homo sapiens , Severe acute respiratory syndrome coronavirus 2
Assembly composition: protein/protein complex
Assembly name:
Envelope small membrane protein and Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-144985 (Preferred)
search this ID
2.1 Angstrom crystal structure of the PALS-1-L27N and PATJ L27 heterodimer complex
Li Y, Lavie A, Margolis B, Karnak D
EMBO J
(2004)
[PMID: 15241471 ]
Source organisms: Mus musculus , Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Protein PALS1 and InaD-like protein
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-185569 (Preferred)
search this ID
Overall structure of Patj/Pals1/Mals complex
Zhang J, Yang X, Long J, Shen Y
J Biol Chem
(2012)
[PMID: 22337881 ]
Assembly composition: protein only structure
Assembly name:
InaD-like protein, Protein PALS1, Protein lin-7 homolog B
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-123312 (Preferred)
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Crystal Structure of PALS1/Crb complex
Wei Z, Li Y, Zhang M
Proc Natl Acad Sci U S A
(2014)
[PMID: 25385611 ]
Source organisms: Drosophila melanogaster , Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Protein crumbs and Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-145148 (Preferred)
search this ID
Solution Structure of Patj/Pals1 L27 Domain Complex
Feng W, Long J-F, Zhang M
Proc Natl Acad Sci U S A
(2005)
[PMID: 15863617 ]
Source organisms: Rattus norvegicus , Homo sapiens
Assembly composition: protein/protein complex
Assembly name:
Multiple PDZ domain protein and Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-129563 (Preferred)
search this ID
CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF PALS1
Ivanova ME, Purkiss AG, McDonald NQ
Acta Crystallogr D Biol Crystallogr
(2015)
[PMID: 25760605 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-185379 (Preferred)
search this ID

CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF PALS1 IN COMPLEX WITH THE CRB PEPTIDE
Ivanova ME, Purkiss AG, McDonald NQ
Acta Crystallogr D Biol Crystallogr
(2015)
[PMID: 25760605 ]
Source organism: Homo sapiens
Assembly composition: protein/protein complex
Modified residues:
SME
Assembly name:
Protein crumbs homolog 1 and Protein PALS1
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-160617 (Preferred)
search this ID
Entries 1 to 10 of 11