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Entry Information
Entry status
(1)
Experimental methods
(1)
X-ray diffraction
(2)
Authors
(7)
Hanashima S
(2)
Ikeda A
(2)
Kojima T
(2)
Matsumoto N
(2)
Nagae M
(2)
Yamaguchi Y
(2)
Yamamoto K
(2)
Homo / hetero assembly
(1)
homo
(2)
Assembly composition
(1)
protein structure
(2)
Assembly polymer count
(1)
monomer
(2)
Resolution distribution
2.5 - 3
(1)
3.0 - 3.5
(1)
Release year distribution
2015 - 2020
(2)
Journal
(1)
FEBS Lett
(2)
Macromolecules
Organism superkingdom
(1)
Eukaryota
(2)
Organism name
(1)
Homo sapiens
(2)
Molecule name
(5)
C-type lectin DDB27
(2)
C-type lectin domain family 4 member A
(2)
C-type lectin superfamily member 6
(2)
Dendritic cell immunoreceptor
(2)
Lectin-like immunoreceptor
(2)
Molecule type
(1)
Protein
(2)
Gene names
(5)
CLEC4A
(2)
CLECSF6
(2)
DCIR
(2)
HDCGC13P
(2)
LLIR
(2)
Interacting ligands
(3)
CA : CALCIUM ION
(2)
MAN : alpha-D-mannopyranose
(1)
NAG : 2-acetamido-2-deoxy-beta-D-glucopyranose
(1)
Sequence and Structure classification
CATH class
(1)
Alpha Beta
(2)
CATH topology
(1)
Mannose-Binding Protein A; Chain A
(2)
Pfam accession / name
(1)
PF00059 : Lectin_C
(2)
Experimental Information
Diffraction protocol
(1)
Single wavelength
(2)
Diffraction radiation source type
(1)
Synchrotron
(2)
Diffraction source
(1)
PHOTON FACTORY BEAMLINE BL-17A
(2)
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(1)
Photon Factory
(2)
Representative Structures
Representative Structures
Entries
Macromolecules
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Entries 1 to 2 of 2
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Crystal structure of human dendritic cell inhibitory receptor (DCIR) C-type lectin domain in complex with biantennary glycan
Nagae M, Yamaguchi Y
FEBS Lett
(2016)
[PMID: 27015765 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Carbohydrate polymer components:
Molecule 1 -
MAN(1), NAG(1)
Assembly name:
C-type lectin domain family 4 member A
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-193970 (Preferred)
search this ID

Crystal structure of human dendritic cell inhibitory receptor (DCIR) C-type lectin domain in ligand-free form
Nagae M, Yamaguchi Y
FEBS Lett
(2016)
[PMID: 27015765 ]
Source organism: Homo sapiens
Assembly composition: protein only structure
Assembly name:
C-type lectin domain family 4 member A
(Preferred)
search this complex
PDBe complex ID:
PDB-CPX-193970 (Preferred)
search this ID

Entries 1 to 2 of 2