Uniprot accession / id : Q9WV35  OR   Uniprot accession / id : Q9Y235
 
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Entry Information
Entry status  (1)
REL
(2)
 
Experimental methods  (2)
Solution NMR
(1)
X-ray diffraction
(1)
 
Authors  (17)
Bransteitter R
(1)
Chen X
(1)
Chen XS
(1)
Goodman M
(1)
Goodman MF
(1)
Hayashi F
(1)
Inoue M
(1)
Kigawa T
(1)
Klein M
(1)
Klein MG
(1)
Muto Y
(1)
Nagashima T
(1)
Nagata T
(1)
Prochnow C
(1)
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
(1)
Umehara T
(1)
Yokoyama S
(1)
 
Homo / hetero assembly  (1)
homo
(2)
 
Assembly composition  (1)
protein structure
(2)
 
Assembly polymer count  (2)
monomer
(1)
tetramer
(1)
 
Resolution distribution
2.0 - 2.5
(1)
 
Release year distribution
2005 - 2010
(2)
 
Journal  (2)
Nature
(1)
To be published
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(2)
 
Organism name  (2)
Homo sapiens
(1)
Mus musculus
(1)
 
Molecule name  (2)
C->U-editing enzyme APOBEC-2
(2)
mRNA(cytosine(6666)) deaminase 2
(2)
 
Molecule type  (1)
Protein
(2)
 
Gene names  (2)
APOBEC2
(1)
Apobec2
(1)
 
Interacting ligands  (1)
ZN : ZINC ION
(2)
 
Function and Biology
EC number / name  (1)
3.5.4.36 : mRNA(cytosine(6666)) deaminase
(2)
 
Biological function  (1)
catalytic activity
(2)
 
Sequence and Structure classification
CATH class  (1)
Alpha Beta
(2)
 
CATH topology  (1)
Cytidine Deaminase; domain 2
(2)
 
Pfam accession / name  (2)
PF05240 : APOBEC_C
(1)
PF18772 : APOBEC2
(1)
 
Experimental Information
Diffraction protocol  (2)
MAD
(1)
Single wavelength
(1)
 
Diffraction radiation source type  (1)
Synchrotron
(1)
 
Diffraction source  (1)
ALS BEAMLINE 8.2.1
(1)
 
Synchrotron site  (1)
ALS
(1)
 
Diffraction detector type  (1)
CCD
(1)
 
Refinement software  (1)
CNS
(1)
 
NMR
NMR software packages  (4)
KUJIRA
(1)
NMRPipe
(1)
NMRView
(1)
VNMR
(1)
 
NMR Field Strength
500.0 - 600
(1)
600.0 - 700
(1)
700.0 - 800
(1)
800.0 - 900
(1)
900.0 - 1000
(1)
 
Representative Structures
Representative Structures
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Entries 1 to 2 of 2
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Solution structure of the monomeric form of mouse APOBEC2
Hayashi F, Nagata T, Nagashima T, Muto Y, Inoue M, Kigawa T, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
To be published
Source organism: Mus musculus  
Assembly composition: protein only structure
Bound ligands: ZN    ZN   
Assembly name: C->U-editing enzyme APOBEC-2 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-194395 (Preferred)   search this ID
PDBe-KB: Q9WV35   
Solution NMR
Released: 22 Dec 2009
Model geometry
Fit model/data
Data not analysed
2rpz
2rpz
2rpz
The APOBEC2 Crystal Structure and Functional Implications for AID
Prochnow C, Bransteitter R, Klein M, Goodman M, Chen X
Nature (2007) [PMID: 17187054  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: ZN    ZN   
Assembly name: C->U-editing enzyme APOBEC-2 (Preferred)   search this complex
PDBe complex ID: PDB-CPX-195092 (Preferred)   search this ID
PDBe-KB: Q9Y235   
X-ray diffraction
2.5Å resolution
Released: 9 Jan 2007
Model geometry
Fit model/data
2nyt
2nyt
2nyt
Entries 1 to 2 of 2
Entries 1 to 2 of 2