Uniprot accession / id : Q9WVQ5  OR   Uniprot accession / id : Q96GX9
 
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Entry Information
Entry status  (1)
REL
(1)
 
Experimental methods  (1)
X-ray diffraction
(1)
 
Authors  (16)
Ashida H
(1)
Chun KH
(1)
Hah SS
(1)
Hong SH
(1)
Jung YK
(1)
Kang W
(1)
Kim HC
(1)
Kim NY
(1)
Kim TY
(1)
Le LTM
(1)
Le le TM
(1)
Lee HM
(1)
Lim B
(1)
Lim YC
(1)
Yang JK
(1)
Yokota A
(1)
 
Homo / hetero assembly  (1)
homo
(1)
 
Assembly composition  (1)
protein structure
(1)
 
Assembly polymer count  (1)
tetramer
(1)
 
Resolution distribution
1.5 - 2
(1)
 
Release year distribution
2010 - 2015
(1)
 
Journal  (1)
Proc Natl Acad Sci U S A
(1)
 
Macromolecules
Organism superkingdom  (1)
Eukaryota
(1)
 
Organism name  (1)
Homo sapiens
(1)
 
Molecule name  (4)
APAF1-interacting protein
(1)
MTRu-1-P dehydratase
(1)
Methylthioribulose-1-phosphate dehydratase
(1)
hAPIP
(1)
 
Molecule type  (1)
Protein
(1)
 
Gene names  (2)
APIP
(1)
CGI-29
(1)
 
Interacting ligands  (1)
ZN : ZINC ION
(1)
 
Function and Biology
EC number / name  (1)
4.2.1.109 : Methylthioribulose 1-phosphate dehydratase
(1)
 
Biological function  (6)
identical protein binding
(1)
lyase activity
(1)
metal ion binding
(1)
methylthioribulose 1-phosphate dehydratase activity
(1)
protein binding
(1)
zinc ion binding
(1)
 
Biological process  (7)
L-methionine salvage from methylthioadenosine
(1)
amino acid biosynthetic process
(1)
apoptotic process
(1)
negative regulation of apoptotic process
(1)
protein homotetramerization
(1)
pyroptotic inflammatory response
(1)
regulation of ERK1 and ERK2 cascade
(1)
 
Biological cell component  (2)
cytoplasm
(1)
cytosol
(1)
 
Sequence and Structure classification
CATH class  (1)
Alpha Beta
(1)
 
CATH topology  (1)
L-fuculose-1-phosphate Aldolase
(1)
 
Pfam accession / name  (1)
PF00596 : Aldolase_II
(1)
 
Experimental Information
Diffraction protocol  (1)
MAD
(1)
 
Diffraction radiation source type  (1)
Synchrotron
(1)
 
Diffraction source  (1)
PAL/PLS BEAMLINE 5C (4A)
(1)
 
Synchrotron site  (1)
PAL/PLS
(1)
 
Diffraction detector type  (1)
CCD
(1)
 
Refinement software  (1)
REFMAC
(1)
 
Representative Structures
Representative Structures
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Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme
Kang W, Hong SH, Lee HM, Kim NY, Lim YC, Le LTM, Lim B, Kim HC, Kim TY, Ashida H, Yokota A, Hah SS, Chun KH, Jung YK, Yang JK
Proc Natl Acad Sci U S A (2014) [PMID: 24367089  ]
Source organism: Homo sapiens  
Assembly composition: protein only structure
Bound ligands: ZN    ZN   
Assembly name: Methylthioribulose-1-phosphate dehydratase (Preferred)   search this complex
PDBe complex ID: PDB-CPX-188524 (Preferred)   search this ID
PDBe-KB: Q96GX9   
X-ray diffraction
2Å resolution
Released: 29 Jan 2014
Model geometry
Fit model/data
4m6r
4m6r
4m6r
Entries 1 to 1 of 1
Entries 1 to 1 of 1