HEADER IMMUNE SYSTEM 30-OCT-07 2RMM TITLE SOLUTION STRUCTURE OF GB1 A34F MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN G; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: IGG-BINDING PROTEIN G; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS SP. 'GROUP G'; SOURCE 3 ORGANISM_TAXID: 1320; SOURCE 4 GENE: SPG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS GB1 MUTANT, CELL WALL, IGG-BINDING PROTEIN, PEPTIDOGLYCAN-ANCHOR, KEYWDS 2 SECRETED, IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.JEE,I.BYEON,J.M.LOUIS,A.M.GRONENBORN REVDAT 4 29-MAY-24 2RMM 1 REMARK REVDAT 3 10-NOV-21 2RMM 1 REMARK SEQADV REVDAT 2 24-FEB-09 2RMM 1 VERSN REVDAT 1 04-DEC-07 2RMM 0 JRNL AUTH J.JEE,I.BYEON,J.M.LOUIS,A.M.GRONENBORN JRNL TITL SOLUTION STRUCTURE OF GB1 A34F MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 8.0 REMARK 3 AUTHORS : CASE, DARDEN, CHEATHAM, SIMMERLING, WANG, DUKE, REMARK 3 LUO, KOLL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AMBER 8.0 WITH GB MODEL REMARK 4 REMARK 4 2RMM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000150038. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT ATM REMARK 210 SAMPLE CONTENTS : 2.0MM [U-99% 13C; U-99% 15N] REMARK 210 ENTITY, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D C(CO)NH; 3D HNCACB; 3D HCCH- REMARK 210 TOCSY; 3D H(CCO)NH; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 36 13.53 -145.15 REMARK 500 1 ASP A 40 42.83 35.42 REMARK 500 1 ASP B 36 -71.24 -155.24 REMARK 500 1 ASN B 37 28.62 48.38 REMARK 500 1 ASP B 40 42.56 37.99 REMARK 500 2 ASN A 35 -78.71 -161.86 REMARK 500 2 ASP A 36 10.80 -141.86 REMARK 500 2 ASP A 40 44.21 37.12 REMARK 500 2 LYS A 50 42.12 39.74 REMARK 500 2 ASP B 36 28.20 -157.01 REMARK 500 2 ASP B 40 37.48 36.48 REMARK 500 3 ASP A 36 25.67 -158.05 REMARK 500 3 ASP A 40 40.76 37.56 REMARK 500 3 ASP B 36 -59.91 -158.31 REMARK 500 3 ASN B 37 -72.83 63.99 REMARK 500 3 VAL B 39 -29.03 -141.01 REMARK 500 3 ASP B 40 47.38 39.39 REMARK 500 3 LYS B 50 40.19 38.05 REMARK 500 4 ASP A 36 22.59 -166.79 REMARK 500 4 ASP A 40 41.56 39.56 REMARK 500 4 ASP B 36 -51.71 -160.42 REMARK 500 4 ASN B 37 -81.58 59.85 REMARK 500 4 VAL B 39 -54.12 -135.20 REMARK 500 4 ASP B 40 41.13 39.52 REMARK 500 5 ASN A 35 -39.16 -164.18 REMARK 500 5 ASP A 36 15.85 -159.80 REMARK 500 5 VAL A 39 -49.16 -147.10 REMARK 500 5 ASP B 36 -70.86 -158.27 REMARK 500 5 ASN B 37 59.96 26.94 REMARK 500 5 VAL B 39 -60.09 -125.58 REMARK 500 5 ASP B 40 44.04 36.93 REMARK 500 6 ASN A 35 -63.55 -158.76 REMARK 500 6 ASP A 36 17.08 -158.78 REMARK 500 6 VAL A 39 -46.29 -137.01 REMARK 500 6 LYS A 50 43.61 38.16 REMARK 500 6 THR B 11 -41.98 -131.31 REMARK 500 6 ASP B 36 30.33 -162.80 REMARK 500 6 VAL B 39 40.89 -157.55 REMARK 500 6 ASP B 40 44.58 -66.04 REMARK 500 7 VAL A 39 40.62 -150.02 REMARK 500 7 ASP A 40 44.08 -64.98 REMARK 500 7 ASP B 40 40.26 39.22 REMARK 500 8 ASP A 36 12.37 44.51 REMARK 500 8 ASP A 40 38.05 39.12 REMARK 500 8 ASP B 36 -60.12 -161.56 REMARK 500 8 ASP B 40 46.75 35.81 REMARK 500 9 ASN A 35 -155.76 -171.66 REMARK 500 9 ASP A 36 -6.31 -53.09 REMARK 500 9 ASP A 40 48.43 -75.82 REMARK 500 9 ASN B 35 73.02 -63.31 REMARK 500 REMARK 500 THIS ENTRY HAS 116 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2RMM A 3 56 UNP P06654 SPG1_STRSG 229 282 DBREF 2RMM B 3 56 UNP P06654 SPG1_STRSG 229 282 SEQADV 2RMM MET A 1 UNP P06654 EXPRESSION TAG SEQADV 2RMM GLN A 2 UNP P06654 EXPRESSION TAG SEQADV 2RMM PHE A 34 UNP P06654 ALA 260 ENGINEERED MUTATION SEQADV 2RMM MET B 1 UNP P06654 EXPRESSION TAG SEQADV 2RMM GLN B 2 UNP P06654 EXPRESSION TAG SEQADV 2RMM PHE B 34 UNP P06654 ALA 260 ENGINEERED MUTATION SEQRES 1 A 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 A 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 A 56 GLU LYS VAL PHE LYS GLN TYR PHE ASN ASP ASN GLY VAL SEQRES 4 A 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 A 56 THR VAL THR GLU SEQRES 1 B 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 B 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 B 56 GLU LYS VAL PHE LYS GLN TYR PHE ASN ASP ASN GLY VAL SEQRES 4 B 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 B 56 THR VAL THR GLU HELIX 1 1 ASP A 22 PHE A 34 1 13 HELIX 2 2 ASP A 47 THR A 49 5 3 HELIX 3 3 ASP B 22 PHE B 34 1 13 HELIX 4 4 ASP B 47 THR B 49 5 3 SHEET 1 A 8 GLU A 42 ASP A 46 0 SHEET 2 A 8 THR A 51 THR A 55 -1 O THR A 51 N ASP A 46 SHEET 3 A 8 GLN A 2 ASN A 8 1 N ILE A 6 O VAL A 54 SHEET 4 A 8 LYS A 13 GLU A 19 -1 O THR A 18 N TYR A 3 SHEET 5 A 8 LYS B 13 GLU B 19 -1 O LYS B 13 N THR A 17 SHEET 6 A 8 GLN B 2 ASN B 8 -1 N LEU B 7 O GLY B 14 SHEET 7 A 8 THR B 51 THR B 55 1 O PHE B 52 N LYS B 4 SHEET 8 A 8 GLU B 42 ASP B 46 -1 N ASP B 46 O THR B 51 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20