HEADER VIRAL PROTEIN 06-JUN-08 2VVD TITLE CRYSTAL STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF THE TITLE 2 SPIKE PROTEIN P1 FROM BACTERIOPHAGE PM2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN P1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN, RESIDUES 159-335; COMPND 5 SYNONYM: P1-RECEPTOR BINDING PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOALTEROMONAS PHAGE PM2; SOURCE 3 ORGANISM_TAXID: 10661; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: POPINF KEYWDS VIRAL RECEPTOR BINDING DOMAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.G.A.ABRESCIA,J.M.GRIMES,H.K.KIVELA,R.ASSENBERG,G.C.SUTTON, AUTHOR 2 S.J.BUTCHER,J.K.H.BAMFORD,D.H.BAMFORD,D.I.STUART REVDAT 2 24-FEB-09 2VVD 1 VERSN REVDAT 1 16-SEP-08 2VVD 0 JRNL AUTH N.G.A.ABRESCIA,J.M.GRIMES,H.K.KIVELA,R.ASSENBERG, JRNL AUTH 2 G.C.SUTTON,S.J.BUTCHER,J.K.H.BAMFORD,D.H.BAMFORD, JRNL AUTH 3 D.I.STUART JRNL TITL INSIGHTS INTO VIRUS EVOLUTION AND MEMBRANE JRNL TITL 2 BIOGENESIS FROM THE STRUCTURE OF THE MARINE LIPID- JRNL TITL 3 CONTAINING BACTERIOPHAGE PM2. JRNL REF MOL.CELL V. 31 749 2008 JRNL REFN ISSN 1097-2765 JRNL PMID 18775333 JRNL DOI 10.1016/J.MOLCEL.2008.06.026 REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 3 NUMBER OF REFLECTIONS : 6521 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT : 369 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.26 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 261 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1600 REMARK 3 BIN FREE R VALUE SET COUNT : 12 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1279 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 169 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59000 REMARK 3 B22 (A**2) : 0.23000 REMARK 3 B33 (A**2) : 0.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.587 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.257 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.422 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.886 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1319 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 861 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1797 ; 0.966 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2099 ; 0.770 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 163 ; 6.210 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;35.875 ;24.627 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 205 ;11.205 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;17.924 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 198 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1496 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 277 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 219 ; 0.181 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 905 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 652 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 685 ; 0.078 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 150 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.119 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 20 ; 0.190 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 832 ; 0.259 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1313 ; 0.455 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 560 ; 0.887 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 483 ; 1.250 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2VVD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUN-08. REMARK 100 THE PDBE ID CODE IS EBI-36412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97912,0.90499 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6935 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.26 REMARK 200 RESOLUTION RANGE LOW (A) : 21.60 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 12.1 REMARK 200 R MERGE (I) : 0.05 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 46.50 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 52.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.7 REMARK 200 R MERGE FOR SHELL (I) : 0.08 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 27.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7.4MG/ML PROTEIN (IN 150MM NACL REMARK 280 AND 20MM TRIS PH 7.5), 20%(W/V) PEG3350, 200MM CACL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.82250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.08850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.52750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.08850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.82250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.52750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 160 REMARK 465 ASN A 161 REMARK 465 TYR A 162 REMARK 465 TRP A 163 REMARK 465 VAL A 164 REMARK 465 SER A 165 REMARK 465 TYR A 328 REMARK 465 ALA A 329 REMARK 465 GLN A 330 REMARK 465 ILE A 331 REMARK 465 LEU A 332 REMARK 465 MSE A 333 REMARK 465 GLU A 334 REMARK 465 ARG A 335 REMARK 465 THR A 336 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 166 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 236 86.23 -160.35 REMARK 500 SER A 256 -29.43 -144.95 REMARK 500 TYR A 306 -0.60 74.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1328 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 232 O REMARK 620 2 ASP A 294 OD1 93.1 REMARK 620 3 ASP A 294 OD2 87.1 51.0 REMARK 620 4 ASP A 296 OD2 78.3 137.2 86.4 REMARK 620 5 HOH A2034 O 163.8 92.6 84.7 87.3 REMARK 620 6 HOH A2068 O 87.4 80.7 131.0 139.4 108.5 REMARK 620 7 HOH A2032 O 98.5 148.2 158.3 74.4 84.5 70.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1329 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 168 OE1 REMARK 620 2 ALA A 166 O 72.3 REMARK 620 3 HOH A2002 O 72.6 91.3 REMARK 620 4 HOH A2001 O 84.6 154.0 93.0 REMARK 620 5 ASP A 269 OD1 140.5 84.1 140.5 108.1 REMARK 620 6 HOH A2124 O 78.5 85.6 150.5 78.2 68.4 REMARK 620 7 HOH A2122 O 137.9 122.7 68.2 82.6 81.5 136.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1328 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1329 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VVE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE STEM AND RECEPTOR REMARK 900 BINDING DOMAIN OF THE SPIKE PROTEIN P1 REMARK 900 FROM BACTERIOPHAGE PM2 REMARK 900 RELATED ID: 2W0C RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE ENTIRE LIPID- REMARK 900 CONTAINING BACTERIOPHAGE PM2 REMARK 999 REMARK 999 SEQUENCE REMARK 999 FRAGMENT CLONED STARTS AT RESIDUE 159 AND STOPS AT 335 DBREF 2VVD A 160 336 UNP Q9XJR3 Q9XJR3_BPPM2 159 335 SEQRES 1 A 177 VAL ASN TYR TRP VAL SER ASP GLU GLU ILE ARG VAL PHE SEQRES 2 A 177 LYS GLU TYR SER ALA ARG ALA LYS TYR ALA GLN ASN GLU SEQRES 3 A 177 GLY ARG THR ALA LEU GLU ALA ASN ASN VAL PRO PHE PHE SEQRES 4 A 177 ASP ILE ASP VAL PRO PRO GLU LEU ASP GLY VAL PRO PHE SEQRES 5 A 177 SER LEU LYS ALA ARG VAL ARG HIS LYS SER LYS GLY VAL SEQRES 6 A 177 ASP GLY LEU GLY ASP TYR THR SER ILE SER VAL LYS PRO SEQRES 7 A 177 ALA PHE TYR ILE THR GLU GLY ASP GLU THR THR ASP THR SEQRES 8 A 177 LEU ILE LYS TYR THR SER TYR GLY SER THR GLY SER HIS SEQRES 9 A 177 SER GLY TYR ASP PHE ASP ASP ASN THR LEU ASP VAL MSE SEQRES 10 A 177 VAL THR LEU SER ALA GLY VAL HIS ARG VAL PHE PRO VAL SEQRES 11 A 177 GLU THR GLU LEU ASP TYR ASP ALA VAL GLN GLU VAL GLN SEQRES 12 A 177 HIS ASP TRP TYR ASP GLU SER PHE THR THR PHE ILE GLU SEQRES 13 A 177 VAL TYR SER ASP ASP PRO LEU LEU THR VAL LYS GLY TYR SEQRES 14 A 177 ALA GLN ILE LEU MSE GLU ARG THR MODRES 2VVD MSE A 276 MET SELENOMETHIONINE HET MSE A 276 8 HET CA A1328 1 HET CA A1329 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 2 MSE C5 H11 N O2 SE FORMUL 3 CA 2(CA 2+) FORMUL 4 HOH *169(H2 O1) HELIX 1 1 GLY A 186 ASN A 193 1 8 HELIX 2 2 PRO A 203 ASP A 207 5 5 HELIX 3 3 GLY A 223 LEU A 227 5 5 HELIX 4 4 TYR A 266 ASP A 270 5 5 HELIX 5 5 ASP A 294 GLN A 302 1 9 SHEET 1 AA 4 ARG A 170 GLU A 174 0 SHEET 2 AA 4 THR A 311 SER A 318 -1 O VAL A 316 N PHE A 172 SHEET 3 AA 4 PHE A 211 HIS A 219 -1 O LYS A 214 N TYR A 317 SHEET 4 AA 4 ASN A 271 VAL A 277 -1 O ASN A 271 N VAL A 217 SHEET 1 AB 4 PHE A 198 VAL A 202 0 SHEET 2 AB 4 GLY A 282 GLU A 290 -1 O GLY A 282 N VAL A 202 SHEET 3 AB 4 PRO A 237 THR A 242 -1 O ALA A 238 N VAL A 289 SHEET 4 AB 4 LEU A 251 TYR A 254 -1 O ILE A 252 N ILE A 241 LINK C VAL A 275 N MSE A 276 1555 1555 1.33 LINK C MSE A 276 N VAL A 277 1555 1555 1.33 LINK CA CA A1328 O SER A 232 1555 1555 2.38 LINK CA CA A1328 OD1 ASP A 294 1555 1555 2.59 LINK CA CA A1328 OD2 ASP A 294 1555 1555 2.48 LINK CA CA A1328 OD2 ASP A 296 1555 1555 2.40 LINK CA CA A1328 O HOH A2034 1555 4545 2.36 LINK CA CA A1328 O HOH A2068 1555 1555 2.38 LINK CA CA A1328 O HOH A2032 1555 4545 2.42 LINK CA CA A1329 O ASP A 166 1555 1555 2.50 LINK CA CA A1329 O HOH A2002 1555 1555 2.65 LINK CA CA A1329 O HOH A2001 1555 1555 2.30 LINK CA CA A1329 OD1 ASP A 269 1555 3755 2.33 LINK CA CA A1329 O HOH A2124 1555 3755 2.55 LINK CA CA A1329 O HOH A2122 1555 3755 2.45 LINK CA CA A1329 OE1 GLU A 168 1555 1555 2.63 SITE 1 AC1 6 SER A 232 ASP A 294 ASP A 296 HOH A2032 SITE 2 AC1 6 HOH A2034 HOH A2068 SITE 1 AC2 7 ASP A 166 GLU A 168 ASP A 269 HOH A2001 SITE 2 AC2 7 HOH A2002 HOH A2122 HOH A2124 CRYST1 43.645 49.055 72.177 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022912 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020385 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013855 0.00000