HEADER REPLICATION/DNA 15-APR-19 6JUO TITLE MSDPO4-DNA COMPLEX 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A, F; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*CP*TP*GP*GP*GP*GP*TP*CP*CP*TP*AP*GP*G)-3'); COMPND 10 CHAIN: B, C, G, H; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: DNA TEMPLATE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 VARIANT: ATCC 700084 / MC(2)155; SOURCE 7 GENE: DINB, MSMEG_1014, MSMEG_2294; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_VARIANT: C41DE3; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 14 ORGANISM_TAXID: 1772 KEYWDS DNA POLYMERASE, REPLICATION, REPLICATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.T.NAIR,M.K.JOHNSON REVDAT 2 22-NOV-23 6JUO 1 LINK REVDAT 1 19-FEB-20 6JUO 0 JRNL AUTH M.K.JOHNSON,J.KOTTUR,D.T.NAIR JRNL TITL A POLAR FILTER IN DNA POLYMERASES PREVENTS RIBONUCLEOTIDE JRNL TITL 2 INCORPORATION. JRNL REF NUCLEIC ACIDS RES. V. 47 10693 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31544946 JRNL DOI 10.1093/NAR/GKZ792 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 47928 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2560 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.22 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3463 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 189 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5298 REMARK 3 NUCLEIC ACID ATOMS : 902 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 422 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.49000 REMARK 3 B22 (A**2) : 0.86000 REMARK 3 B33 (A**2) : 0.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.248 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.210 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.156 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.927 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6477 ; 0.024 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 5735 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9013 ; 2.187 ; 1.856 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13228 ; 1.246 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 694 ; 6.455 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 222 ;36.588 ;22.883 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 836 ;16.334 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;18.142 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 999 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6636 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1388 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2779 ; 2.285 ; 2.695 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2778 ; 2.278 ; 2.693 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3472 ; 3.470 ; 4.028 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3473 ; 3.470 ; 4.031 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3698 ; 3.324 ; 3.702 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3697 ; 3.324 ; 3.702 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5541 ; 5.060 ; 5.439 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7616 ; 7.344 ;36.463 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7514 ; 7.292 ;36.075 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 79 REMARK 3 ORIGIN FOR THE GROUP (A): -12.9957 -21.3094 -23.0642 REMARK 3 T TENSOR REMARK 3 T11: 0.0818 T22: 0.1163 REMARK 3 T33: 0.1247 T12: -0.0112 REMARK 3 T13: -0.0207 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 0.6191 L22: 0.9765 REMARK 3 L33: 0.9680 L12: -0.4579 REMARK 3 L13: 0.4558 L23: -0.1853 REMARK 3 S TENSOR REMARK 3 S11: -0.0530 S12: 0.0245 S13: -0.0847 REMARK 3 S21: 0.0856 S22: -0.0516 S23: -0.0217 REMARK 3 S31: -0.0577 S32: -0.0963 S33: 0.1046 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 10 REMARK 3 RESIDUE RANGE : A 80 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): 11.8640 -21.3155 -28.5146 REMARK 3 T TENSOR REMARK 3 T11: 0.0834 T22: 0.0865 REMARK 3 T33: 0.1874 T12: 0.0007 REMARK 3 T13: -0.0144 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 1.6478 L22: 0.1047 REMARK 3 L33: 0.6094 L12: 0.3762 REMARK 3 L13: -0.5150 L23: -0.1888 REMARK 3 S TENSOR REMARK 3 S11: -0.0255 S12: -0.0962 S13: -0.3264 REMARK 3 S21: -0.0228 S22: -0.0169 S23: -0.0610 REMARK 3 S31: -0.0376 S32: 0.0419 S33: 0.0425 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): 10.1651 1.3167 -30.3233 REMARK 3 T TENSOR REMARK 3 T11: 0.1553 T22: 0.0903 REMARK 3 T33: 0.0883 T12: 0.0291 REMARK 3 T13: 0.0111 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.2104 L22: 0.4338 REMARK 3 L33: 0.4557 L12: -0.0591 REMARK 3 L13: -0.0486 L23: -0.3166 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: 0.0040 S13: -0.0487 REMARK 3 S21: 0.0422 S22: 0.0662 S23: -0.0159 REMARK 3 S31: -0.1183 S32: -0.0714 S33: -0.0700 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 347 REMARK 3 ORIGIN FOR THE GROUP (A): -3.7272 -4.5991 0.2964 REMARK 3 T TENSOR REMARK 3 T11: 0.1753 T22: 0.1410 REMARK 3 T33: 0.0600 T12: 0.0583 REMARK 3 T13: -0.0444 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 1.2645 L22: 0.4655 REMARK 3 L33: 1.5022 L12: -0.0192 REMARK 3 L13: 0.7165 L23: 0.6879 REMARK 3 S TENSOR REMARK 3 S11: -0.0311 S12: -0.1562 S13: 0.0585 REMARK 3 S21: -0.0966 S22: -0.1292 S23: 0.0522 REMARK 3 S31: -0.1563 S32: -0.2573 S33: 0.1603 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 838 B 850 REMARK 3 RESIDUE RANGE : C 862 C 873 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4768 1.4133 -12.4712 REMARK 3 T TENSOR REMARK 3 T11: 0.3221 T22: 0.1282 REMARK 3 T33: 0.1072 T12: 0.0376 REMARK 3 T13: -0.1160 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 0.1133 L22: 0.4652 REMARK 3 L33: 0.0706 L12: -0.2243 REMARK 3 L13: 0.0448 L23: -0.1069 REMARK 3 S TENSOR REMARK 3 S11: -0.0004 S12: 0.0283 S13: 0.0340 REMARK 3 S21: 0.0273 S22: -0.0675 S23: -0.1093 REMARK 3 S31: -0.1155 S32: -0.0242 S33: 0.0680 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 11 F 79 REMARK 3 ORIGIN FOR THE GROUP (A): -2.4820 21.7848 -46.4680 REMARK 3 T TENSOR REMARK 3 T11: 0.0854 T22: 0.1532 REMARK 3 T33: 0.1369 T12: 0.0131 REMARK 3 T13: 0.0012 T23: 0.1063 REMARK 3 L TENSOR REMARK 3 L11: 0.9880 L22: 1.0338 REMARK 3 L33: 1.2573 L12: -0.8370 REMARK 3 L13: 0.8658 L23: -0.3625 REMARK 3 S TENSOR REMARK 3 S11: -0.1244 S12: 0.1180 S13: 0.1445 REMARK 3 S21: 0.1978 S22: 0.0376 S23: -0.0927 REMARK 3 S31: -0.0187 S32: 0.1724 S33: 0.0868 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 10 REMARK 3 RESIDUE RANGE : F 80 F 170 REMARK 3 ORIGIN FOR THE GROUP (A): -27.2972 16.9429 -50.4143 REMARK 3 T TENSOR REMARK 3 T11: 0.0587 T22: 0.1534 REMARK 3 T33: 0.1002 T12: -0.0075 REMARK 3 T13: 0.0237 T23: 0.0725 REMARK 3 L TENSOR REMARK 3 L11: 0.9501 L22: 1.5430 REMARK 3 L33: 0.2296 L12: 0.4167 REMARK 3 L13: -0.4576 L23: -0.2904 REMARK 3 S TENSOR REMARK 3 S11: -0.0738 S12: 0.2388 S13: 0.0521 REMARK 3 S21: 0.0675 S22: 0.0811 S23: -0.0073 REMARK 3 S31: 0.0301 S32: -0.0982 S33: -0.0072 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 171 F 244 REMARK 3 ORIGIN FOR THE GROUP (A): -25.1509 3.8611 -32.2813 REMARK 3 T TENSOR REMARK 3 T11: 0.1144 T22: 0.0827 REMARK 3 T33: 0.1545 T12: -0.0018 REMARK 3 T13: -0.0290 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 0.1193 L22: 0.7847 REMARK 3 L33: 0.3865 L12: 0.1481 REMARK 3 L13: 0.0763 L23: -0.3516 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: -0.0388 S13: -0.0693 REMARK 3 S21: 0.0858 S22: -0.0353 S23: -0.2309 REMARK 3 S31: -0.0552 S32: -0.0592 S33: 0.0407 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 245 F 347 REMARK 3 ORIGIN FOR THE GROUP (A): -13.5613 32.5904 -20.1219 REMARK 3 T TENSOR REMARK 3 T11: 0.2161 T22: 0.0290 REMARK 3 T33: 0.0285 T12: 0.0196 REMARK 3 T13: -0.0055 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.6617 L22: 0.5000 REMARK 3 L33: 1.0781 L12: -0.5119 REMARK 3 L13: 0.4599 L23: 0.4286 REMARK 3 S TENSOR REMARK 3 S11: 0.0447 S12: -0.0276 S13: 0.0584 REMARK 3 S21: 0.1042 S22: -0.0112 S23: -0.0467 REMARK 3 S31: 0.2076 S32: -0.0482 S33: -0.0335 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 838 G 848 REMARK 3 RESIDUE RANGE : H 866 H 873 REMARK 3 ORIGIN FOR THE GROUP (A): -16.7037 18.2668 -26.7457 REMARK 3 T TENSOR REMARK 3 T11: 0.2496 T22: 0.0405 REMARK 3 T33: 0.1342 T12: 0.0753 REMARK 3 T13: -0.0100 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 1.4353 L22: 0.0536 REMARK 3 L33: 0.6852 L12: 0.2719 REMARK 3 L13: 0.9897 L23: 0.1878 REMARK 3 S TENSOR REMARK 3 S11: 0.1222 S12: -0.0427 S13: -0.0566 REMARK 3 S21: 0.0509 S22: -0.0329 S23: -0.0139 REMARK 3 S31: 0.1051 S32: -0.0354 S33: -0.0894 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS WERE NOT ADDED REMARK 4 REMARK 4 6JUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011774. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50583 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 70.177 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6JUL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 2KMME 12%, 0.2MM NACL, BIS TRIS REMARK 280 PROPANE 6.0, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.05000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.26500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 105.26500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 348 REMARK 465 ARG A 349 REMARK 465 PRO A 350 REMARK 465 ALA A 351 REMARK 465 VAL A 352 REMARK 465 THR A 353 REMARK 465 ALA A 354 REMARK 465 GLY A 355 REMARK 465 THR A 356 REMARK 465 DT B 837 REMARK 465 DA B 851 REMARK 465 DC B 852 REMARK 465 DC B 853 REMARK 465 DC B 854 REMARK 465 DT C 856 REMARK 465 DC C 857 REMARK 465 DT C 858 REMARK 465 DG C 859 REMARK 465 DG C 860 REMARK 465 DG C 861 REMARK 465 PRO F 348 REMARK 465 ARG F 349 REMARK 465 PRO F 350 REMARK 465 ALA F 351 REMARK 465 VAL F 352 REMARK 465 THR F 353 REMARK 465 ALA F 354 REMARK 465 GLY F 355 REMARK 465 THR F 356 REMARK 465 DT G 837 REMARK 465 DG G 849 REMARK 465 DG G 850 REMARK 465 DA G 851 REMARK 465 DC G 852 REMARK 465 DC G 853 REMARK 465 DC G 854 REMARK 465 DT H 856 REMARK 465 DC H 857 REMARK 465 DT H 858 REMARK 465 DG H 859 REMARK 465 DG H 860 REMARK 465 DG H 861 REMARK 465 DG H 862 REMARK 465 DT H 863 REMARK 465 DC H 864 REMARK 465 DC H 865 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG F 129 O HOH F 501 1.79 REMARK 500 N2 DG B 849 O2 DC C 865 1.98 REMARK 500 NZ LYS F 152 OP1 DC H 873 2.06 REMARK 500 NH2 ARG F 26 O HOH F 502 2.14 REMARK 500 OP2 DG B 840 O HOH B 901 2.17 REMARK 500 O HOH A 539 O HOH A 643 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 85 CD GLU A 85 OE1 0.071 REMARK 500 LEU A 342 C LEU A 342 O -0.183 REMARK 500 DG B 842 O3' DG B 843 P -0.084 REMARK 500 DC B 846 O3' DT B 847 P 0.100 REMARK 500 VAL F 90 C VAL F 90 O -0.130 REMARK 500 MET F 91 C MET F 91 O -0.129 REMARK 500 TRP F 171 CG TRP F 171 CD2 -0.113 REMARK 500 TRP F 171 CG TRP F 171 CD1 -0.180 REMARK 500 TRP F 171 CD1 TRP F 171 NE1 -0.150 REMARK 500 TRP F 171 CE2 TRP F 171 CD2 -0.098 REMARK 500 TRP F 171 CE3 TRP F 171 CZ3 -0.111 REMARK 500 TRP F 171 C TRP F 171 O -0.157 REMARK 500 MET F 172 C MET F 172 O -0.181 REMARK 500 THR F 173 CB THR F 173 CG2 -0.205 REMARK 500 THR F 173 C THR F 173 O -0.126 REMARK 500 ALA F 195 C ALA F 195 O -0.142 REMARK 500 GLY F 198 C GLY F 198 O -0.101 REMARK 500 ILE F 199 C ILE F 199 O -0.168 REMARK 500 THR F 200 C THR F 200 O -0.143 REMARK 500 GLU F 280 CD GLU F 280 OE1 0.077 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 11 CB - CG - OD1 ANGL. DEV. = 8.7 DEGREES REMARK 500 ASP A 11 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 TYR A 14 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 TYR A 14 CB - CG - CD1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 37 CB - CG - OD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ASP A 37 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP A 120 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 129 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 129 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 245 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 245 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP A 269 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 287 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DG B 842 O5' - P - OP2 ANGL. DEV. = -8.8 DEGREES REMARK 500 DG C 868 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DC C 871 O5' - P - OP1 ANGL. DEV. = -10.4 DEGREES REMARK 500 DC C 871 O5' - P - OP2 ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG F 20 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG F 68 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG F 68 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP F 107 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 DT G 839 O5' - P - OP2 ANGL. DEV. = -8.2 DEGREES REMARK 500 DA H 870 O5' - P - OP1 ANGL. DEV. = -9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 12 64.98 27.52 REMARK 500 CYS A 70 69.85 -161.99 REMARK 500 ASP A 79 77.76 -112.71 REMARK 500 SER A 145 -157.03 -159.14 REMARK 500 LEU A 329 56.40 -114.29 REMARK 500 ASP A 345 -77.22 -67.95 REMARK 500 GLN F 12 56.85 34.08 REMARK 500 SER F 145 -158.28 -153.28 REMARK 500 ASP F 177 30.15 -97.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH F 685 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH F 686 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH F 687 DISTANCE = 6.43 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD2 REMARK 620 2 ASP A 107 OD1 107.5 REMARK 620 3 GLU A 108 OE2 89.3 112.3 REMARK 620 4 0KX A 401 O1A 81.6 88.7 158.8 REMARK 620 5 DC C 873 O3' 174.8 77.5 87.6 100.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD1 REMARK 620 2 LEU A 10 O 71.8 REMARK 620 3 ASP A 107 OD2 106.2 89.5 REMARK 620 4 0KX A 401 O1G 85.7 97.4 167.6 REMARK 620 5 0KX A 401 O2B 153.1 85.9 87.9 82.3 REMARK 620 6 0KX A 401 O1A 123.5 164.1 82.2 88.5 80.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 9 OD2 REMARK 620 2 ASP F 107 OD1 76.4 REMARK 620 3 GLU F 108 OE1 104.5 105.6 REMARK 620 4 0KX F 401 O1A 87.1 84.1 166.3 REMARK 620 5 HOH F 554 O 82.5 145.0 106.6 67.0 REMARK 620 6 DC H 873 O3' 178.5 103.5 74.1 94.4 98.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 9 OD1 REMARK 620 2 LEU F 10 O 77.4 REMARK 620 3 ASP F 107 OD1 79.5 113.2 REMARK 620 4 ASP F 107 OD2 110.5 86.3 46.8 REMARK 620 5 0KX F 401 O1G 79.3 90.7 143.4 168.9 REMARK 620 6 0KX F 401 O2B 159.7 90.6 120.5 84.6 84.6 REMARK 620 7 0KX F 401 O1A 113.9 166.3 77.5 96.1 84.3 76.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX F 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 403 DBREF 6JUO A 1 356 UNP A0QR77 A0QR77_MYCS2 1 356 DBREF 6JUO B 837 854 PDB 6JUO 6JUO 837 854 DBREF 6JUO C 856 873 PDB 6JUO 6JUO 856 873 DBREF 6JUO F 1 356 UNP A0QR77 A0QR77_MYCS2 1 356 DBREF 6JUO G 837 854 PDB 6JUO 6JUO 837 854 DBREF 6JUO H 856 873 PDB 6JUO 6JUO 856 873 SEQADV 6JUO TYR A 14 UNP A0QR77 LEU 14 ENGINEERED MUTATION SEQADV 6JUO TYR F 14 UNP A0QR77 LEU 14 ENGINEERED MUTATION SEQRES 1 A 356 MET THR LYS TRP VAL LEU HIS VAL ASP LEU ASP GLN PHE SEQRES 2 A 356 TYR ALA SER VAL GLU LEU ARG ARG ARG PRO ASP LEU ARG SEQRES 3 A 356 GLY GLN PRO VAL ILE VAL GLY GLY SER GLY ASP PRO SER SEQRES 4 A 356 GLU PRO ARG LYS VAL VAL THR CYS ALA SER TYR GLU ALA SEQRES 5 A 356 ARG GLU PHE GLY VAL HIS ALA GLY MET PRO LEU ARG ALA SEQRES 6 A 356 ALA ALA ARG ARG CYS PRO ASP ALA THR PHE LEU PRO SER SEQRES 7 A 356 ASP PRO ALA ALA TYR ASP GLU ALA SER GLU GLN VAL MET SEQRES 8 A 356 GLY LEU LEU ARG ASP LEU GLY HIS PRO LEU GLU VAL TRP SEQRES 9 A 356 GLY TRP ASP GLU ALA TYR LEU GLY ALA ASP LEU PRO ASP SEQRES 10 A 356 GLU SER ASP PRO VAL GLU VAL ALA GLU ARG ILE ARG THR SEQRES 11 A 356 VAL VAL ALA ALA GLU THR GLY LEU SER CYS SER VAL GLY SEQRES 12 A 356 ILE SER ASP ASN LYS GLN ARG ALA LYS VAL ALA THR GLY SEQRES 13 A 356 PHE ALA LYS PRO ALA GLY ILE TYR VAL LEU THR GLU ALA SEQRES 14 A 356 ASN TRP MET THR VAL MET GLY ASP ARG PRO PRO ASP ALA SEQRES 15 A 356 LEU TRP GLY VAL GLY PRO LYS THR THR LYS LYS LEU ALA SEQRES 16 A 356 ALA MET GLY ILE THR THR VAL ALA ASP LEU ALA VAL THR SEQRES 17 A 356 ASP PRO SER VAL LEU THR THR ALA PHE GLY PRO SER THR SEQRES 18 A 356 GLY LEU TRP LEU LEU LEU LEU ALA LYS GLY GLY GLY ASP SEQRES 19 A 356 THR GLU VAL SER SER GLU PRO TRP VAL PRO ARG SER ARG SEQRES 20 A 356 SER HIS VAL VAL THR PHE PRO GLN ASP LEU THR GLU ARG SEQRES 21 A 356 ARG GLU MET ASP SER ALA VAL ARG ASP LEU ALA LEU GLN SEQRES 22 A 356 THR LEU ALA GLU ILE VAL GLU GLN GLY ARG ILE VAL THR SEQRES 23 A 356 ARG VAL ALA VAL THR VAL ARG THR SER THR PHE TYR THR SEQRES 24 A 356 ARG THR LYS ILE ARG LYS LEU PRO ALA PRO SER THR ASP SEQRES 25 A 356 ALA GLY GLN ILE VAL ASP THR ALA LEU ALA VAL LEU ASP SEQRES 26 A 356 GLN PHE GLU LEU ASP ARG PRO VAL ARG LEU LEU GLY VAL SEQRES 27 A 356 ARG LEU GLU LEU ALA MET ASP ASP VAL PRO ARG PRO ALA SEQRES 28 A 356 VAL THR ALA GLY THR SEQRES 1 B 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 B 18 DG DA DC DC DC SEQRES 1 C 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 C 18 DG DA DC DC DC SEQRES 1 F 356 MET THR LYS TRP VAL LEU HIS VAL ASP LEU ASP GLN PHE SEQRES 2 F 356 TYR ALA SER VAL GLU LEU ARG ARG ARG PRO ASP LEU ARG SEQRES 3 F 356 GLY GLN PRO VAL ILE VAL GLY GLY SER GLY ASP PRO SER SEQRES 4 F 356 GLU PRO ARG LYS VAL VAL THR CYS ALA SER TYR GLU ALA SEQRES 5 F 356 ARG GLU PHE GLY VAL HIS ALA GLY MET PRO LEU ARG ALA SEQRES 6 F 356 ALA ALA ARG ARG CYS PRO ASP ALA THR PHE LEU PRO SER SEQRES 7 F 356 ASP PRO ALA ALA TYR ASP GLU ALA SER GLU GLN VAL MET SEQRES 8 F 356 GLY LEU LEU ARG ASP LEU GLY HIS PRO LEU GLU VAL TRP SEQRES 9 F 356 GLY TRP ASP GLU ALA TYR LEU GLY ALA ASP LEU PRO ASP SEQRES 10 F 356 GLU SER ASP PRO VAL GLU VAL ALA GLU ARG ILE ARG THR SEQRES 11 F 356 VAL VAL ALA ALA GLU THR GLY LEU SER CYS SER VAL GLY SEQRES 12 F 356 ILE SER ASP ASN LYS GLN ARG ALA LYS VAL ALA THR GLY SEQRES 13 F 356 PHE ALA LYS PRO ALA GLY ILE TYR VAL LEU THR GLU ALA SEQRES 14 F 356 ASN TRP MET THR VAL MET GLY ASP ARG PRO PRO ASP ALA SEQRES 15 F 356 LEU TRP GLY VAL GLY PRO LYS THR THR LYS LYS LEU ALA SEQRES 16 F 356 ALA MET GLY ILE THR THR VAL ALA ASP LEU ALA VAL THR SEQRES 17 F 356 ASP PRO SER VAL LEU THR THR ALA PHE GLY PRO SER THR SEQRES 18 F 356 GLY LEU TRP LEU LEU LEU LEU ALA LYS GLY GLY GLY ASP SEQRES 19 F 356 THR GLU VAL SER SER GLU PRO TRP VAL PRO ARG SER ARG SEQRES 20 F 356 SER HIS VAL VAL THR PHE PRO GLN ASP LEU THR GLU ARG SEQRES 21 F 356 ARG GLU MET ASP SER ALA VAL ARG ASP LEU ALA LEU GLN SEQRES 22 F 356 THR LEU ALA GLU ILE VAL GLU GLN GLY ARG ILE VAL THR SEQRES 23 F 356 ARG VAL ALA VAL THR VAL ARG THR SER THR PHE TYR THR SEQRES 24 F 356 ARG THR LYS ILE ARG LYS LEU PRO ALA PRO SER THR ASP SEQRES 25 F 356 ALA GLY GLN ILE VAL ASP THR ALA LEU ALA VAL LEU ASP SEQRES 26 F 356 GLN PHE GLU LEU ASP ARG PRO VAL ARG LEU LEU GLY VAL SEQRES 27 F 356 ARG LEU GLU LEU ALA MET ASP ASP VAL PRO ARG PRO ALA SEQRES 28 F 356 VAL THR ALA GLY THR SEQRES 1 G 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 G 18 DG DA DC DC DC SEQRES 1 H 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 H 18 DG DA DC DC DC HET 0KX A 401 28 HET MG A 402 1 HET MG A 403 1 HET 0KX F 401 28 HET MG F 402 1 HET MG F 403 1 HETNAM 0KX 2'-DEOXY-5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 0KX PHOSPHORYL]AMINO}PHOSPHORYL]CYTIDINE HETNAM MG MAGNESIUM ION FORMUL 7 0KX 2(C9 H17 N4 O12 P3) FORMUL 8 MG 4(MG 2+) FORMUL 13 HOH *422(H2 O) HELIX 1 AA1 GLN A 12 ARG A 22 1 11 HELIX 2 AA2 PRO A 23 ARG A 26 5 4 HELIX 3 AA3 SER A 49 GLU A 54 1 6 HELIX 4 AA4 PRO A 62 CYS A 70 1 9 HELIX 5 AA5 ASP A 79 ASP A 96 1 18 HELIX 6 AA6 ASP A 120 GLY A 137 1 18 HELIX 7 AA7 ASN A 147 LYS A 159 1 13 HELIX 8 AA8 ASN A 170 GLY A 176 1 7 HELIX 9 AA9 PRO A 179 LEU A 183 5 5 HELIX 10 AB1 GLY A 187 MET A 197 1 11 HELIX 11 AB2 THR A 201 VAL A 207 1 7 HELIX 12 AB3 ASP A 209 GLY A 218 1 10 HELIX 13 AB4 SER A 220 LYS A 230 1 11 HELIX 14 AB5 GLU A 259 GLN A 281 1 23 HELIX 15 AB6 ASP A 312 GLN A 326 1 15 HELIX 16 AB7 GLN F 12 ARG F 21 1 10 HELIX 17 AB8 ARG F 22 ARG F 26 5 5 HELIX 18 AB9 SER F 49 GLU F 54 1 6 HELIX 19 AC1 PRO F 62 CYS F 70 1 9 HELIX 20 AC2 ASP F 79 ASP F 96 1 18 HELIX 21 AC3 PRO F 121 GLY F 137 1 17 HELIX 22 AC4 ASN F 147 LYS F 159 1 13 HELIX 23 AC5 ASN F 170 GLY F 176 1 7 HELIX 24 AC6 PRO F 179 LEU F 183 5 5 HELIX 25 AC7 GLY F 187 MET F 197 1 11 HELIX 26 AC8 THR F 201 VAL F 207 1 7 HELIX 27 AC9 ASP F 209 GLY F 218 1 10 HELIX 28 AD1 SER F 220 LYS F 230 1 11 HELIX 29 AD2 GLU F 259 GLN F 281 1 23 HELIX 30 AD3 ASP F 312 GLN F 326 1 15 SHEET 1 AA1 5 LEU A 101 TRP A 104 0 SHEET 2 AA1 5 GLU A 108 LEU A 115 -1 O GLU A 108 N TRP A 104 SHEET 3 AA1 5 THR A 2 LEU A 10 -1 N TRP A 4 O ALA A 113 SHEET 4 AA1 5 CYS A 140 SER A 145 -1 O GLY A 143 N HIS A 7 SHEET 5 AA1 5 ILE A 163 VAL A 165 1 O TYR A 164 N ILE A 144 SHEET 1 AA2 3 CYS A 47 ALA A 48 0 SHEET 2 AA2 3 VAL A 30 VAL A 32 -1 N VAL A 32 O CYS A 47 SHEET 3 AA2 3 THR A 74 LEU A 76 1 O THR A 74 N ILE A 31 SHEET 1 AA3 4 SER A 246 LEU A 257 0 SHEET 2 AA3 4 VAL A 333 LEU A 342 -1 O LEU A 340 N ARG A 247 SHEET 3 AA3 4 VAL A 285 THR A 294 -1 N ALA A 289 O ARG A 339 SHEET 4 AA3 4 THR A 299 SER A 310 -1 O LYS A 302 N VAL A 290 SHEET 1 AA4 5 LEU F 101 TRP F 104 0 SHEET 2 AA4 5 GLU F 108 LEU F 115 -1 O TYR F 110 N GLU F 102 SHEET 3 AA4 5 THR F 2 LEU F 10 -1 N LEU F 6 O LEU F 111 SHEET 4 AA4 5 CYS F 140 SER F 145 -1 O GLY F 143 N HIS F 7 SHEET 5 AA4 5 ILE F 163 VAL F 165 1 O TYR F 164 N ILE F 144 SHEET 1 AA5 3 CYS F 47 ALA F 48 0 SHEET 2 AA5 3 VAL F 30 VAL F 32 -1 N VAL F 32 O CYS F 47 SHEET 3 AA5 3 THR F 74 LEU F 76 1 O LEU F 76 N ILE F 31 SHEET 1 AA6 4 SER F 246 LEU F 257 0 SHEET 2 AA6 4 VAL F 333 LEU F 342 -1 O LEU F 340 N ARG F 247 SHEET 3 AA6 4 VAL F 285 THR F 294 -1 N ALA F 289 O ARG F 339 SHEET 4 AA6 4 THR F 299 SER F 310 -1 O ARG F 300 N VAL F 292 LINK OD2 ASP A 9 MG MG A 402 1555 1555 2.72 LINK OD1 ASP A 9 MG MG A 403 1555 1555 2.19 LINK O LEU A 10 MG MG A 403 1555 1555 2.47 LINK OD1 ASP A 107 MG MG A 402 1555 1555 2.39 LINK OD2 ASP A 107 MG MG A 403 1555 1555 2.06 LINK OE2 GLU A 108 MG MG A 402 1555 1555 2.58 LINK O1A 0KX A 401 MG MG A 402 1555 1555 2.49 LINK O1G 0KX A 401 MG MG A 403 1555 1555 2.20 LINK O2B 0KX A 401 MG MG A 403 1555 1555 2.34 LINK O1A 0KX A 401 MG MG A 403 1555 1555 1.96 LINK MG MG A 402 O3' DC C 873 1555 1555 2.36 LINK OD2 ASP F 9 MG MG F 402 1555 1555 2.51 LINK OD1 ASP F 9 MG MG F 403 1555 1555 2.15 LINK O LEU F 10 MG MG F 403 1555 1555 2.39 LINK OD1 ASP F 107 MG MG F 402 1555 1555 2.19 LINK OD1 ASP F 107 MG MG F 403 1555 1555 3.00 LINK OD2 ASP F 107 MG MG F 403 1555 1555 1.98 LINK OE1 GLU F 108 MG MG F 402 1555 1555 2.11 LINK O1A 0KX F 401 MG MG F 402 1555 1555 2.69 LINK O1G 0KX F 401 MG MG F 403 1555 1555 2.46 LINK O2B 0KX F 401 MG MG F 403 1555 1555 2.40 LINK O1A 0KX F 401 MG MG F 403 1555 1555 2.16 LINK MG MG F 402 O HOH F 554 1555 1555 2.68 LINK MG MG F 402 O3' DC H 873 1555 1555 2.52 CISPEP 1 LYS A 159 PRO A 160 0 -4.45 CISPEP 2 LYS F 159 PRO F 160 0 3.98 SITE 1 AC1 24 ASP A 9 LEU A 10 ASP A 11 GLN A 12 SITE 2 AC1 24 PHE A 13 TYR A 14 THR A 46 CYS A 47 SITE 3 AC1 24 TYR A 50 ARG A 53 ALA A 59 ASP A 107 SITE 4 AC1 24 LYS A 159 MG A 402 MG A 403 HOH A 504 SITE 5 AC1 24 HOH A 534 HOH A 552 HOH A 575 HOH A 632 SITE 6 AC1 24 HOH A 636 HOH A 638 DG B 840 DC C 873 SITE 1 AC2 6 ASP A 9 ASP A 107 GLU A 108 0KX A 401 SITE 2 AC2 6 MG A 403 DC C 873 SITE 1 AC3 5 ASP A 9 LEU A 10 ASP A 107 0KX A 401 SITE 2 AC3 5 MG A 402 SITE 1 AC4 20 ASP F 9 LEU F 10 ASP F 11 GLN F 12 SITE 2 AC4 20 PHE F 13 TYR F 14 THR F 46 CYS F 47 SITE 3 AC4 20 TYR F 50 ARG F 53 ASP F 107 LYS F 159 SITE 4 AC4 20 MG F 402 MG F 403 HOH F 528 HOH F 535 SITE 5 AC4 20 HOH F 554 HOH F 574 DG G 840 DC H 873 SITE 1 AC5 7 ASP F 9 ASP F 107 GLU F 108 0KX F 401 SITE 2 AC5 7 MG F 403 HOH F 554 DC H 873 SITE 1 AC6 5 ASP F 9 LEU F 10 ASP F 107 0KX F 401 SITE 2 AC6 5 MG F 402 CRYST1 54.100 81.030 210.530 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018484 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012341 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004750 0.00000