HEADER TRANSFERASE 28-JUL-20 6ZWP TITLE P38A BOUND WITH SR348 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 14; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAPK 14,CYTOKINE SUPPRESSIVE ANTI-INFLAMMATORY DRUG-BINDING COMPND 5 PROTEIN,CSBP,MAP KINASE MXI2,MAX-INTERACTING PROTEIN 2,MITOGEN- COMPND 6 ACTIVATED PROTEIN KINASE P38 ALPHA,MAP KINASE P38 ALPHA,STRESS- COMPND 7 ACTIVATED PROTEIN KINASE 2A,SAPK2A; COMPND 8 EC: 2.7.11.24; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK14, CSBP, CSBP1, CSBP2, CSPB1, MXI2, SAPK2A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, INHIBITOR, P38A, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHROEDER,S.ROEHM,S.KNAPP,C.H.ARROWSMITH,C.BOUNTRA,A.M.EDWARDS, AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 31-JAN-24 6ZWP 1 REMARK REVDAT 3 21-OCT-20 6ZWP 1 JRNL REVDAT 2 14-OCT-20 6ZWP 1 JRNL REVDAT 1 12-AUG-20 6ZWP 0 SPRSDE 12-AUG-20 6ZWP 6Y6W JRNL AUTH S.ROHM,M.SCHRODER,J.E.DWYER,C.S.WIDDOWSON,A.CHAIKUAD, JRNL AUTH 2 B.T.BERGER,A.C.JOERGER,A.KRAMER,J.HARBIG,D.DAUCH,M.KUDOLO, JRNL AUTH 3 S.LAUFER,M.C.BAGLEY,S.KNAPP JRNL TITL SELECTIVE TARGETING OF THE ALPHA C AND DFG-OUT POCKET IN P38 JRNL TITL 2 MAPK. JRNL REF EUR.J.MED.CHEM. V. 208 12721 2020 JRNL REFN ISSN 0223-5234 JRNL PMID 33035818 JRNL DOI 10.1016/J.EJMECH.2020.112721 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 27830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1521 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1983 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2558 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.81000 REMARK 3 B22 (A**2) : -1.08000 REMARK 3 B33 (A**2) : 1.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.165 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.047 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2675 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2453 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3642 ; 1.364 ; 1.633 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5657 ; 1.263 ; 1.596 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 325 ; 6.386 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 129 ;31.931 ;22.326 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;14.489 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;18.545 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 355 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3110 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 564 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 122 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9815 1.5529 -16.2889 REMARK 3 T TENSOR REMARK 3 T11: 0.0808 T22: 0.1151 REMARK 3 T33: 0.1119 T12: -0.0059 REMARK 3 T13: -0.0103 T23: -0.0586 REMARK 3 L TENSOR REMARK 3 L11: 5.1959 L22: 4.1221 REMARK 3 L33: 2.7986 L12: 0.7936 REMARK 3 L13: -0.7157 L23: 1.6246 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.5160 S13: -0.3593 REMARK 3 S21: -0.2616 S22: 0.1954 S23: -0.4827 REMARK 3 S31: -0.1385 S32: 0.3188 S33: -0.1934 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 239 REMARK 3 ORIGIN FOR THE GROUP (A): -14.7259 3.2436 -18.4052 REMARK 3 T TENSOR REMARK 3 T11: 0.0242 T22: 0.0748 REMARK 3 T33: 0.0743 T12: -0.0028 REMARK 3 T13: 0.0087 T23: -0.0443 REMARK 3 L TENSOR REMARK 3 L11: 6.7507 L22: 3.7282 REMARK 3 L33: 3.5159 L12: -1.2444 REMARK 3 L13: 2.0600 L23: -1.3496 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: 0.4301 S13: 0.1301 REMARK 3 S21: -0.0108 S22: -0.3186 S23: 0.0696 REMARK 3 S31: -0.1287 S32: -0.0241 S33: 0.3189 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 240 A 353 REMARK 3 ORIGIN FOR THE GROUP (A): -15.4677 3.7791 -10.4451 REMARK 3 T TENSOR REMARK 3 T11: 0.1479 T22: 0.0749 REMARK 3 T33: 0.0532 T12: -0.0515 REMARK 3 T13: 0.0616 T23: -0.0419 REMARK 3 L TENSOR REMARK 3 L11: 4.4109 L22: 1.4726 REMARK 3 L33: 1.3161 L12: 0.1720 REMARK 3 L13: 0.3971 L23: 0.5403 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: -0.1281 S13: -0.1361 REMARK 3 S21: 0.1432 S22: -0.1197 S23: 0.2049 REMARK 3 S31: -0.0018 S32: -0.2593 S33: 0.1167 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6ZWP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292110411. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29401 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 41.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 1.25300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5LAR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% MMW PEGSMEAR 0.1 M MES, PH 5.8, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.49550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.89650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.06900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.89650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.49550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.06900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 GLY A 31 REMARK 465 SER A 32 REMARK 465 VAL A 117 REMARK 465 LYS A 118 REMARK 465 CYS A 119 REMARK 465 GLN A 120 REMARK 465 LEU A 171 REMARK 465 ALA A 172 REMARK 465 ARG A 173 REMARK 465 HIS A 174 REMARK 465 THR A 175 REMARK 465 ASP A 176 REMARK 465 ASP A 177 REMARK 465 GLU A 178 REMARK 465 MET A 179 REMARK 465 THR A 180 REMARK 465 GLY A 181 REMARK 465 TYR A 182 REMARK 465 SER A 261 REMARK 465 LEU A 262 REMARK 465 ALA A 263 REMARK 465 GLN A 264 REMARK 465 ASP A 354 REMARK 465 GLN A 355 REMARK 465 GLU A 356 REMARK 465 GLU A 357 REMARK 465 MET A 358 REMARK 465 GLU A 359 REMARK 465 SER A 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 10 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 14 CG OD1 ND2 REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 ILE A 17 CG1 CG2 CD1 REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 ARG A 57 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 79 CG CD CE NZ REMARK 470 ARG A 94 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 ASP A 125 CG OD1 OD2 REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 VAL A 183 CG1 CG2 REMARK 470 LEU A 195 CG CD1 CD2 REMARK 470 TRP A 197 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 197 CZ3 CH2 REMARK 470 MET A 198 CG SD CE REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 ARG A 237 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 SER A 251 OG REMARK 470 GLU A 253 CG CD OE1 OE2 REMARK 470 SER A 254 OG REMARK 470 ASN A 257 CG OD1 ND2 REMARK 470 ASN A 269 CG OD1 ND2 REMARK 470 GLN A 310 CG CD OE1 NE2 REMARK 470 LEU A 353 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA A 277 C ALA A 277 O 0.119 REMARK 500 GLU A 317 CD GLU A 317 OE2 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 149 -13.09 80.97 REMARK 500 CYS A 162 19.49 59.19 REMARK 500 LEU A 195 -71.07 -115.06 REMARK 500 PHE A 274 43.31 -106.87 REMARK 500 LEU A 289 53.98 -95.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OE8 A 401 DBREF 6ZWP A 1 360 UNP Q16539 MK14_HUMAN 1 360 SEQADV 6ZWP GLY A 0 UNP Q16539 EXPRESSION TAG SEQADV 6ZWP HIS A 48 UNP Q16539 LEU 48 CONFLICT SEQADV 6ZWP ALA A 263 UNP Q16539 THR 263 CONFLICT SEQRES 1 A 361 GLY MET SER GLN GLU ARG PRO THR PHE TYR ARG GLN GLU SEQRES 2 A 361 LEU ASN LYS THR ILE TRP GLU VAL PRO GLU ARG TYR GLN SEQRES 3 A 361 ASN LEU SER PRO VAL GLY SER GLY ALA TYR GLY SER VAL SEQRES 4 A 361 CYS ALA ALA PHE ASP THR LYS THR GLY HIS ARG VAL ALA SEQRES 5 A 361 VAL LYS LYS LEU SER ARG PRO PHE GLN SER ILE ILE HIS SEQRES 6 A 361 ALA LYS ARG THR TYR ARG GLU LEU ARG LEU LEU LYS HIS SEQRES 7 A 361 MET LYS HIS GLU ASN VAL ILE GLY LEU LEU ASP VAL PHE SEQRES 8 A 361 THR PRO ALA ARG SER LEU GLU GLU PHE ASN ASP VAL TYR SEQRES 9 A 361 LEU VAL THR HIS LEU MET GLY ALA ASP LEU ASN ASN ILE SEQRES 10 A 361 VAL LYS CYS GLN LYS LEU THR ASP ASP HIS VAL GLN PHE SEQRES 11 A 361 LEU ILE TYR GLN ILE LEU ARG GLY LEU LYS TYR ILE HIS SEQRES 12 A 361 SER ALA ASP ILE ILE HIS ARG ASP LEU LYS PRO SER ASN SEQRES 13 A 361 LEU ALA VAL ASN GLU ASP CYS GLU LEU LYS ILE LEU ASP SEQRES 14 A 361 PHE GLY LEU ALA ARG HIS THR ASP ASP GLU MET THR GLY SEQRES 15 A 361 TYR VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE MET SEQRES 16 A 361 LEU ASN TRP MET HIS TYR ASN GLN THR VAL ASP ILE TRP SEQRES 17 A 361 SER VAL GLY CYS ILE MET ALA GLU LEU LEU THR GLY ARG SEQRES 18 A 361 THR LEU PHE PRO GLY THR ASP HIS ILE ASP GLN LEU LYS SEQRES 19 A 361 LEU ILE LEU ARG LEU VAL GLY THR PRO GLY ALA GLU LEU SEQRES 20 A 361 LEU LYS LYS ILE SER SER GLU SER ALA ARG ASN TYR ILE SEQRES 21 A 361 GLN SER LEU ALA GLN MET PRO LYS MET ASN PHE ALA ASN SEQRES 22 A 361 VAL PHE ILE GLY ALA ASN PRO LEU ALA VAL ASP LEU LEU SEQRES 23 A 361 GLU LYS MET LEU VAL LEU ASP SER ASP LYS ARG ILE THR SEQRES 24 A 361 ALA ALA GLN ALA LEU ALA HIS ALA TYR PHE ALA GLN TYR SEQRES 25 A 361 HIS ASP PRO ASP ASP GLU PRO VAL ALA ASP PRO TYR ASP SEQRES 26 A 361 GLN SER PHE GLU SER ARG ASP LEU LEU ILE ASP GLU TRP SEQRES 27 A 361 LYS SER LEU THR TYR ASP GLU VAL ILE SER PHE VAL PRO SEQRES 28 A 361 PRO PRO LEU ASP GLN GLU GLU MET GLU SER HET OE8 A 401 44 HETNAM OE8 5-AZANYL-~{N}-[[4-[[(2~{S})-4-CYCLOHEXYL-1-[(4- HETNAM 2 OE8 FLUOROPHENYL)AMINO]-1-OXIDANYLIDENE-BUTAN-2- HETNAM 3 OE8 YL]CARBAMOYL]PHENYL]METHYL]-1-PHENYL-PYRAZOLE-4- HETNAM 4 OE8 CARBOXAMIDE HETSYN OE8 SR348 FORMUL 2 OE8 C34 H37 F N6 O3 FORMUL 3 HOH *97(H2 O) HELIX 1 AA1 SER A 61 MET A 78 1 18 HELIX 2 AA2 THR A 123 ALA A 144 1 22 HELIX 3 AA3 LYS A 152 SER A 154 5 3 HELIX 4 AA4 ALA A 184 ARG A 189 5 6 HELIX 5 AA5 ALA A 190 MET A 194 5 5 HELIX 6 AA6 THR A 203 GLY A 219 1 17 HELIX 7 AA7 ASP A 227 GLY A 240 1 14 HELIX 8 AA8 GLY A 243 LYS A 248 1 6 HELIX 9 AA9 SER A 252 GLN A 260 1 9 HELIX 10 AB1 ASN A 269 PHE A 274 1 6 HELIX 11 AB2 ASN A 278 LEU A 289 1 12 HELIX 12 AB3 THR A 298 ALA A 304 1 7 HELIX 13 AB4 HIS A 305 ALA A 309 5 5 HELIX 14 AB5 GLN A 325 ARG A 330 5 6 HELIX 15 AB6 LEU A 333 SER A 347 1 15 SHEET 1 AA1 2 PHE A 8 GLU A 12 0 SHEET 2 AA1 2 ILE A 17 PRO A 21 -1 O TRP A 18 N GLN A 11 SHEET 1 AA2 5 TYR A 24 PRO A 29 0 SHEET 2 AA2 5 SER A 37 ASP A 43 -1 O PHE A 42 N GLN A 25 SHEET 3 AA2 5 ARG A 49 LYS A 54 -1 O VAL A 52 N CYS A 39 SHEET 4 AA2 5 TYR A 103 HIS A 107 -1 O LEU A 104 N LYS A 53 SHEET 5 AA2 5 ASP A 88 PHE A 90 -1 N ASP A 88 O VAL A 105 SHEET 1 AA3 3 ALA A 111 ASP A 112 0 SHEET 2 AA3 3 LEU A 156 VAL A 158 -1 O VAL A 158 N ALA A 111 SHEET 3 AA3 3 LEU A 164 ILE A 166 -1 O LYS A 165 N ALA A 157 SITE 1 AC1 15 TYR A 35 VAL A 38 ALA A 51 LYS A 53 SITE 2 AC1 15 ARG A 67 GLU A 71 ILE A 84 THR A 106 SITE 3 AC1 15 HIS A 107 MET A 109 LEU A 167 ASP A 168 SITE 4 AC1 15 PHE A 169 HOH A 537 HOH A 555 CRYST1 64.991 74.138 75.793 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015387 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013488 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013194 0.00000