HEADER TRANSFERASE 27-DEC-22 8FN5 TITLE STRUCTURE OF THE TRUNCATED CATALYTIC DOMAIN OF STREPTOCOCCUS MUTANS TITLE 2 GTFD COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSYLTRANSFERASE-S; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GTF-S,DEXTRANSUCRASE,SUCROSE 6-GLUCOSYLTRANSFERASE; COMPND 5 EC: 2.4.1.5; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: CRYSTAL STRUCTURE SHOWS A TRUNCATED CATALYTIC DOMAIN COMPND 8 OF GTFD. THE INITIAL PURIFIED CONSTRUCT STRETCHES FROM 248 TO 1090. COMPND 9 PROTEOLYSIS OCCURRED DURING CRYSTALLIZATION, AND RESULTED IN THE COMPND 10 RESIDUE RANGE OF 423-1054. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS; SOURCE 3 ORGANISM_TAXID: 1309; SOURCE 4 GENE: GTFD, SMU_910; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS GTFD, GTF-S, SOLUBLE 1, 6-LINKED ALPHA GLUCANS, BIOFILM, KEYWDS 2 GLUCANSUCRASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.SCHORMANN,C.DEIVANAYAGAM REVDAT 1 17-MAY-23 8FN5 0 JRNL AUTH N.SCHORMANN,M.PATEL,L.THANNICKAL,S.PURUSHOTHAM,R.WU, JRNL AUTH 2 J.L.MIEHER,H.WU,C.DEIVANAYAGAM JRNL TITL THE CATALYTIC DOMAINS OF STREPTOCOCCUS MUTANS JRNL TITL 2 GLUCOSYLTRANSFERASES: A STRUCTURAL ANALYSIS JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 79 119 2023 JRNL REFN ESSN 2053-230X JRNL DOI 10.1107/S2053230X23003199 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 86.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 92899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4821 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.92 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6984 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 375 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9364 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 391 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.850 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9556 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 8864 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12945 ; 1.315 ; 1.640 REMARK 3 BOND ANGLES OTHERS (DEGREES): 20427 ; 1.193 ; 1.591 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1190 ; 7.481 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 505 ;36.070 ;24.851 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1654 ;13.590 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;12.306 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1260 ; 0.053 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11108 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2196 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 8FN5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000271033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97783 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 86.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG 2000MME, 0.1 M BIS-TRIS, PH REMARK 280 5.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.31250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.67800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.38250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.67800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.31250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.38250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 969 REMARK 465 PRO A 970 REMARK 465 GLY A 971 REMARK 465 LYS A 972 REMARK 465 GLU A 973 REMARK 465 VAL A 974 REMARK 465 VAL A 975 REMARK 465 THR A 976 REMARK 465 ALA A 977 REMARK 465 THR A 978 REMARK 465 ARG A 979 REMARK 465 VAL A 980 REMARK 465 ASN A 981 REMARK 465 ASP A 982 REMARK 465 TYR A 983 REMARK 465 GLY A 984 REMARK 465 GLU A 985 REMARK 465 TYR A 986 REMARK 465 ARG A 987 REMARK 465 LYS A 988 REMARK 465 ASP A 989 REMARK 465 SER A 990 REMARK 465 GLU A 991 REMARK 465 ILE A 992 REMARK 465 LYS A 993 REMARK 465 ASN A 994 REMARK 465 THR A 995 REMARK 465 LEU A 996 REMARK 465 TYR A 997 REMARK 465 ALA A 998 REMARK 465 ALA A 999 REMARK 465 ASN A 1000 REMARK 465 THR A 1001 REMARK 465 LYS A 1002 REMARK 465 SER A 1003 REMARK 465 ASN A 1004 REMARK 465 GLY A 1005 REMARK 465 LEU B 969 REMARK 465 PRO B 970 REMARK 465 GLY B 971 REMARK 465 LYS B 972 REMARK 465 GLU B 973 REMARK 465 VAL B 974 REMARK 465 VAL B 975 REMARK 465 THR B 976 REMARK 465 ALA B 977 REMARK 465 THR B 978 REMARK 465 ARG B 979 REMARK 465 VAL B 980 REMARK 465 ASN B 981 REMARK 465 ASP B 982 REMARK 465 TYR B 983 REMARK 465 GLY B 984 REMARK 465 GLU B 985 REMARK 465 TYR B 986 REMARK 465 ARG B 987 REMARK 465 LYS B 988 REMARK 465 ASP B 989 REMARK 465 SER B 990 REMARK 465 GLU B 991 REMARK 465 ILE B 992 REMARK 465 LYS B 993 REMARK 465 ASN B 994 REMARK 465 THR B 995 REMARK 465 LEU B 996 REMARK 465 TYR B 997 REMARK 465 ALA B 998 REMARK 465 ALA B 999 REMARK 465 ASN B 1000 REMARK 465 THR B 1001 REMARK 465 LYS B 1002 REMARK 465 SER B 1003 REMARK 465 ASN B 1004 REMARK 465 GLY B 1005 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 467 -64.06 67.23 REMARK 500 TRP A 505 -67.31 -135.38 REMARK 500 LYS A 517 51.01 -101.90 REMARK 500 VAL A 587 -74.67 -119.77 REMARK 500 ASN A 600 83.25 -150.52 REMARK 500 LYS A 602 9.35 85.65 REMARK 500 LEU A 606 -61.23 68.95 REMARK 500 LYS A 702 -53.72 71.55 REMARK 500 ASP A 706 -85.01 -90.77 REMARK 500 SER A 791 -27.57 89.31 REMARK 500 ASP A 909 -166.45 -168.40 REMARK 500 SER A 911 119.95 145.96 REMARK 500 GLN A 918 -6.97 -58.35 REMARK 500 ASN A 919 -113.73 107.41 REMARK 500 TYR A 921 -54.01 85.25 REMARK 500 VAL B 467 -64.14 66.40 REMARK 500 TRP B 505 -67.91 -135.94 REMARK 500 LYS B 517 51.84 -101.78 REMARK 500 VAL B 587 -73.83 -118.86 REMARK 500 ASN B 600 82.83 -151.59 REMARK 500 LYS B 602 9.55 85.83 REMARK 500 LEU B 606 -61.36 68.82 REMARK 500 SER B 649 148.88 -170.57 REMARK 500 ASP B 706 -85.83 -90.80 REMARK 500 SER B 791 -26.63 88.64 REMARK 500 ASP B 909 -128.86 -140.54 REMARK 500 PHE B 912 -54.09 -21.76 REMARK 500 ASN B 919 143.47 67.18 REMARK 500 TYR B 921 -65.46 83.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8FJ9 RELATED DB: PDB REMARK 900 8FJ9 PROVIDES THE STRUCTURE OF THE GTFB CATALYTIC DOMAIN. DBREF 8FN5 A 423 1054 UNP P49331 GTFD_STRMU 423 1054 DBREF 8FN5 B 423 1054 UNP P49331 GTFD_STRMU 423 1054 SEQRES 1 A 632 ALA ASN ASP ILE ASP ASN SER ASN PRO VAL VAL GLN ALA SEQRES 2 A 632 GLU GLN LEU ASN TRP LEU HIS TYR LEU MET ASN TYR GLY SEQRES 3 A 632 SER ILE VAL ALA ASN ASP PRO GLU ALA ASN PHE ASP GLY SEQRES 4 A 632 VAL ARG VAL ASP ALA VAL ASP ASN VAL ASN ALA ASP LEU SEQRES 5 A 632 LEU GLN ILE ALA SER ASP TYR LEU LYS ALA HIS TYR GLY SEQRES 6 A 632 VAL ASP LYS SER GLU LYS ASN ALA ILE ASN HIS LEU SER SEQRES 7 A 632 ILE LEU GLU ALA TRP SER ASP ASN ASP PRO GLN TYR ASN SEQRES 8 A 632 LYS ASP THR LYS GLY ALA GLN LEU PRO ILE ASP ASN LYS SEQRES 9 A 632 LEU ARG LEU SER LEU LEU TYR ALA LEU THR ARG PRO LEU SEQRES 10 A 632 GLU LYS ASP ALA SER ASN LYS ASN GLU ILE ARG SER GLY SEQRES 11 A 632 LEU GLU PRO VAL ILE THR ASN SER LEU ASN ASN ARG SER SEQRES 12 A 632 ALA GLU GLY LYS ASN SER GLU ARG MET ALA ASN TYR ILE SEQRES 13 A 632 PHE ILE ARG ALA HIS ASP SER GLU VAL GLN THR VAL ILE SEQRES 14 A 632 ALA LYS ILE ILE LYS ALA GLN ILE ASN PRO LYS THR ASP SEQRES 15 A 632 GLY LEU THR PHE THR LEU ASP GLU LEU LYS GLN ALA PHE SEQRES 16 A 632 LYS ILE TYR ASN GLU ASP MET ARG GLN ALA LYS LYS LYS SEQRES 17 A 632 TYR THR GLN SER ASN ILE PRO THR ALA TYR ALA LEU MET SEQRES 18 A 632 LEU SER ASN LYS ASP SER ILE THR ARG LEU TYR TYR GLY SEQRES 19 A 632 ASP MET TYR SER ASP ASP GLY GLN TYR MET ALA THR LYS SEQRES 20 A 632 SER PRO TYR TYR ASP ALA ILE ASP THR LEU LEU LYS ALA SEQRES 21 A 632 ARG ILE LYS TYR ALA ALA GLY GLY GLN ASP MET LYS ILE SEQRES 22 A 632 THR TYR VAL GLU GLY ASP LYS SER HIS MET ASP TRP ASP SEQRES 23 A 632 TYR THR GLY VAL LEU THR SER VAL ARG TYR GLY THR GLY SEQRES 24 A 632 ALA ASN GLU ALA THR ASP GLN GLY SER GLU ALA THR LYS SEQRES 25 A 632 THR GLN GLY MET ALA VAL ILE THR SER ASN ASN PRO SER SEQRES 26 A 632 LEU LYS LEU ASN GLN ASN ASP LYS VAL ILE VAL ASN MET SEQRES 27 A 632 GLY THR ALA HIS LYS ASN GLN GLU TYR ARG PRO LEU LEU SEQRES 28 A 632 LEU THR THR LYS ASP GLY LEU THR SER TYR THR SER ASP SEQRES 29 A 632 ALA ALA ALA LYS SER LEU TYR ARG LYS THR ASN ASP LYS SEQRES 30 A 632 GLY GLU LEU VAL PHE ASP ALA SER ASP ILE GLN GLY TYR SEQRES 31 A 632 LEU ASN PRO GLN VAL SER GLY TYR LEU ALA VAL TRP VAL SEQRES 32 A 632 PRO VAL GLY ALA SER ASP ASN GLN ASP VAL ARG VAL ALA SEQRES 33 A 632 ALA SER ASN LYS ALA ASN ALA THR GLY GLN VAL TYR GLU SEQRES 34 A 632 SER SER SER ALA LEU ASP SER GLN LEU ILE TYR GLU GLY SEQRES 35 A 632 PHE SER ASN PHE GLN ASP PHE VAL THR LYS ASP SER ASP SEQRES 36 A 632 TYR THR ASN LYS LYS ILE ALA GLN ASN VAL GLN LEU PHE SEQRES 37 A 632 LYS SER TRP GLY VAL THR SER PHE GLU MET ALA PRO GLN SEQRES 38 A 632 TYR VAL SER SER GLU ASP GLY SER PHE LEU ASP SER ILE SEQRES 39 A 632 ILE GLN ASN GLY TYR ALA PHE GLU ASP ARG TYR ASP LEU SEQRES 40 A 632 ALA MET SER LYS ASN ASN LYS TYR GLY SER GLN GLN ASP SEQRES 41 A 632 MET ILE ASN ALA VAL LYS ALA LEU HIS LYS SER GLY ILE SEQRES 42 A 632 GLN VAL ILE ALA ASP TRP VAL PRO ASP GLN ILE TYR ASN SEQRES 43 A 632 LEU PRO GLY LYS GLU VAL VAL THR ALA THR ARG VAL ASN SEQRES 44 A 632 ASP TYR GLY GLU TYR ARG LYS ASP SER GLU ILE LYS ASN SEQRES 45 A 632 THR LEU TYR ALA ALA ASN THR LYS SER ASN GLY LYS ASP SEQRES 46 A 632 TYR GLN ALA LYS TYR GLY GLY ALA PHE LEU SER GLU LEU SEQRES 47 A 632 ALA ALA LYS TYR PRO SER ILE PHE ASN ARG THR GLN ILE SEQRES 48 A 632 SER ASN GLY LYS LYS ILE ASP PRO SER GLU LYS ILE THR SEQRES 49 A 632 ALA TRP LYS ALA LYS TYR PHE ASN SEQRES 1 B 632 ALA ASN ASP ILE ASP ASN SER ASN PRO VAL VAL GLN ALA SEQRES 2 B 632 GLU GLN LEU ASN TRP LEU HIS TYR LEU MET ASN TYR GLY SEQRES 3 B 632 SER ILE VAL ALA ASN ASP PRO GLU ALA ASN PHE ASP GLY SEQRES 4 B 632 VAL ARG VAL ASP ALA VAL ASP ASN VAL ASN ALA ASP LEU SEQRES 5 B 632 LEU GLN ILE ALA SER ASP TYR LEU LYS ALA HIS TYR GLY SEQRES 6 B 632 VAL ASP LYS SER GLU LYS ASN ALA ILE ASN HIS LEU SER SEQRES 7 B 632 ILE LEU GLU ALA TRP SER ASP ASN ASP PRO GLN TYR ASN SEQRES 8 B 632 LYS ASP THR LYS GLY ALA GLN LEU PRO ILE ASP ASN LYS SEQRES 9 B 632 LEU ARG LEU SER LEU LEU TYR ALA LEU THR ARG PRO LEU SEQRES 10 B 632 GLU LYS ASP ALA SER ASN LYS ASN GLU ILE ARG SER GLY SEQRES 11 B 632 LEU GLU PRO VAL ILE THR ASN SER LEU ASN ASN ARG SER SEQRES 12 B 632 ALA GLU GLY LYS ASN SER GLU ARG MET ALA ASN TYR ILE SEQRES 13 B 632 PHE ILE ARG ALA HIS ASP SER GLU VAL GLN THR VAL ILE SEQRES 14 B 632 ALA LYS ILE ILE LYS ALA GLN ILE ASN PRO LYS THR ASP SEQRES 15 B 632 GLY LEU THR PHE THR LEU ASP GLU LEU LYS GLN ALA PHE SEQRES 16 B 632 LYS ILE TYR ASN GLU ASP MET ARG GLN ALA LYS LYS LYS SEQRES 17 B 632 TYR THR GLN SER ASN ILE PRO THR ALA TYR ALA LEU MET SEQRES 18 B 632 LEU SER ASN LYS ASP SER ILE THR ARG LEU TYR TYR GLY SEQRES 19 B 632 ASP MET TYR SER ASP ASP GLY GLN TYR MET ALA THR LYS SEQRES 20 B 632 SER PRO TYR TYR ASP ALA ILE ASP THR LEU LEU LYS ALA SEQRES 21 B 632 ARG ILE LYS TYR ALA ALA GLY GLY GLN ASP MET LYS ILE SEQRES 22 B 632 THR TYR VAL GLU GLY ASP LYS SER HIS MET ASP TRP ASP SEQRES 23 B 632 TYR THR GLY VAL LEU THR SER VAL ARG TYR GLY THR GLY SEQRES 24 B 632 ALA ASN GLU ALA THR ASP GLN GLY SER GLU ALA THR LYS SEQRES 25 B 632 THR GLN GLY MET ALA VAL ILE THR SER ASN ASN PRO SER SEQRES 26 B 632 LEU LYS LEU ASN GLN ASN ASP LYS VAL ILE VAL ASN MET SEQRES 27 B 632 GLY THR ALA HIS LYS ASN GLN GLU TYR ARG PRO LEU LEU SEQRES 28 B 632 LEU THR THR LYS ASP GLY LEU THR SER TYR THR SER ASP SEQRES 29 B 632 ALA ALA ALA LYS SER LEU TYR ARG LYS THR ASN ASP LYS SEQRES 30 B 632 GLY GLU LEU VAL PHE ASP ALA SER ASP ILE GLN GLY TYR SEQRES 31 B 632 LEU ASN PRO GLN VAL SER GLY TYR LEU ALA VAL TRP VAL SEQRES 32 B 632 PRO VAL GLY ALA SER ASP ASN GLN ASP VAL ARG VAL ALA SEQRES 33 B 632 ALA SER ASN LYS ALA ASN ALA THR GLY GLN VAL TYR GLU SEQRES 34 B 632 SER SER SER ALA LEU ASP SER GLN LEU ILE TYR GLU GLY SEQRES 35 B 632 PHE SER ASN PHE GLN ASP PHE VAL THR LYS ASP SER ASP SEQRES 36 B 632 TYR THR ASN LYS LYS ILE ALA GLN ASN VAL GLN LEU PHE SEQRES 37 B 632 LYS SER TRP GLY VAL THR SER PHE GLU MET ALA PRO GLN SEQRES 38 B 632 TYR VAL SER SER GLU ASP GLY SER PHE LEU ASP SER ILE SEQRES 39 B 632 ILE GLN ASN GLY TYR ALA PHE GLU ASP ARG TYR ASP LEU SEQRES 40 B 632 ALA MET SER LYS ASN ASN LYS TYR GLY SER GLN GLN ASP SEQRES 41 B 632 MET ILE ASN ALA VAL LYS ALA LEU HIS LYS SER GLY ILE SEQRES 42 B 632 GLN VAL ILE ALA ASP TRP VAL PRO ASP GLN ILE TYR ASN SEQRES 43 B 632 LEU PRO GLY LYS GLU VAL VAL THR ALA THR ARG VAL ASN SEQRES 44 B 632 ASP TYR GLY GLU TYR ARG LYS ASP SER GLU ILE LYS ASN SEQRES 45 B 632 THR LEU TYR ALA ALA ASN THR LYS SER ASN GLY LYS ASP SEQRES 46 B 632 TYR GLN ALA LYS TYR GLY GLY ALA PHE LEU SER GLU LEU SEQRES 47 B 632 ALA ALA LYS TYR PRO SER ILE PHE ASN ARG THR GLN ILE SEQRES 48 B 632 SER ASN GLY LYS LYS ILE ASP PRO SER GLU LYS ILE THR SEQRES 49 B 632 ALA TRP LYS ALA LYS TYR PHE ASN FORMUL 3 HOH *391(H2 O) HELIX 1 AA1 ASN A 430 ASN A 446 1 17 HELIX 2 AA2 ASN A 446 ALA A 452 1 7 HELIX 3 AA3 ASP A 454 ASN A 458 5 5 HELIX 4 AA4 ASP A 468 ASN A 471 5 4 HELIX 5 AA5 ALA A 472 GLY A 487 1 16 HELIX 6 AA6 SER A 491 ASN A 497 1 7 HELIX 7 AA7 ASN A 508 THR A 516 1 9 HELIX 8 AA8 ASP A 524 THR A 536 1 13 HELIX 9 AA9 ASN A 545 ILE A 549 5 5 HELIX 10 AB1 LEU A 553 ASN A 559 1 7 HELIX 11 AB2 VAL A 587 ILE A 599 1 13 HELIX 12 AB3 THR A 609 ARG A 625 1 17 HELIX 13 AB4 ASN A 635 ASN A 646 1 12 HELIX 14 AB5 TYR A 655 TYR A 659 1 5 HELIX 15 AB6 TYR A 672 ALA A 687 1 16 HELIX 16 AB7 SER A 730 LYS A 734 5 5 HELIX 17 AB8 GLY A 761 LYS A 765 5 5 HELIX 18 AB9 ASP A 786 LYS A 790 5 5 HELIX 19 AC1 SER A 853 SER A 858 1 6 HELIX 20 AC2 LYS A 874 ASP A 877 5 4 HELIX 21 AC3 TYR A 878 ASN A 886 1 9 HELIX 22 AC4 ASN A 886 TRP A 893 1 8 HELIX 23 AC5 SER A 911 ILE A 916 1 6 HELIX 24 AC6 SER A 939 SER A 953 1 15 HELIX 25 AC7 ASP A 1007 GLY A 1013 1 7 HELIX 26 AC8 PHE A 1016 TYR A 1024 1 9 HELIX 27 AC9 TYR A 1024 ARG A 1030 1 7 HELIX 28 AD1 LYS A 1049 PHE A 1053 5 5 HELIX 29 AD2 ASN B 430 ASN B 446 1 17 HELIX 30 AD3 ASN B 446 ALA B 452 1 7 HELIX 31 AD4 ASP B 454 ASN B 458 5 5 HELIX 32 AD5 ASP B 468 ASN B 471 5 4 HELIX 33 AD6 ALA B 472 GLY B 487 1 16 HELIX 34 AD7 SER B 491 ASN B 497 1 7 HELIX 35 AD8 ASN B 508 THR B 516 1 9 HELIX 36 AD9 ASP B 524 THR B 536 1 13 HELIX 37 AE1 LEU B 539 ALA B 543 5 5 HELIX 38 AE2 ASN B 545 ILE B 549 5 5 HELIX 39 AE3 GLU B 554 ASN B 559 1 6 HELIX 40 AE4 VAL B 587 ILE B 599 1 13 HELIX 41 AE5 THR B 609 ARG B 625 1 17 HELIX 42 AE6 ASN B 635 ASN B 646 1 12 HELIX 43 AE7 TYR B 655 TYR B 659 1 5 HELIX 44 AE8 TYR B 672 ALA B 687 1 16 HELIX 45 AE9 ASP B 701 MET B 705 5 5 HELIX 46 AF1 SER B 730 GLN B 736 5 7 HELIX 47 AF2 GLY B 761 LYS B 765 5 5 HELIX 48 AF3 ASP B 786 LYS B 790 5 5 HELIX 49 AF4 SER B 853 SER B 858 1 6 HELIX 50 AF5 LYS B 874 ASP B 877 5 4 HELIX 51 AF6 TYR B 878 ASN B 886 1 9 HELIX 52 AF7 ASN B 886 TRP B 893 1 8 HELIX 53 AF8 SER B 911 ILE B 916 1 6 HELIX 54 AF9 SER B 939 SER B 953 1 15 HELIX 55 AG1 ASP B 1007 GLY B 1013 1 7 HELIX 56 AG2 PHE B 1016 TYR B 1024 1 9 HELIX 57 AG3 TYR B 1024 ARG B 1030 1 7 HELIX 58 AG4 LYS B 1049 PHE B 1053 5 5 SHEET 1 AA1 2 ASN A 424 ASP A 425 0 SHEET 2 AA1 2 GLN A 965 ILE A 966 -1 O ILE A 966 N ASN A 424 SHEET 1 AA2 7 ILE A 501 LEU A 502 0 SHEET 2 AA2 7 GLY A 461 VAL A 464 1 N VAL A 464 O ILE A 501 SHEET 3 AA2 7 GLN A 956 TRP A 961 1 O ALA A 959 N ARG A 463 SHEET 4 AA2 7 SER A 897 GLU A 899 1 N PHE A 898 O GLN A 956 SHEET 5 AA2 7 ILE A 861 GLU A 863 1 N TYR A 862 O GLU A 899 SHEET 6 AA2 7 ILE A 650 TYR A 654 1 N LEU A 653 O GLU A 863 SHEET 7 AA2 7 TYR A 577 ILE A 578 1 N ILE A 578 O ARG A 652 SHEET 1 AA3 6 GLN A 691 TYR A 697 0 SHEET 2 AA3 6 GLY A 711 ARG A 717 -1 O THR A 714 N LYS A 694 SHEET 3 AA3 6 MET A 738 SER A 743 -1 O THR A 742 N LEU A 713 SHEET 4 AA3 6 SER A 818 PRO A 826 -1 O TRP A 824 N ALA A 739 SHEET 5 AA3 6 GLU A 768 THR A 775 -1 N LEU A 772 O VAL A 823 SHEET 6 AA3 6 ARG A 794 LYS A 795 -1 O ARG A 794 N TYR A 769 SHEET 1 AA4 4 LEU A 780 SER A 782 0 SHEET 2 AA4 4 GLU A 768 THR A 775 -1 N LEU A 774 O THR A 781 SHEET 3 AA4 4 SER A 818 PRO A 826 -1 O VAL A 823 N LEU A 772 SHEET 4 AA4 4 TYR A 812 LEU A 813 -1 N TYR A 812 O GLY A 819 SHEET 1 AA5 2 VAL A 756 ASN A 759 0 SHEET 2 AA5 2 GLU A 801 PHE A 804 -1 O LEU A 802 N VAL A 758 SHEET 1 AA6 2 ASN B 424 ASP B 425 0 SHEET 2 AA6 2 GLN B 965 ILE B 966 -1 O ILE B 966 N ASN B 424 SHEET 1 AA7 7 ILE B 501 LEU B 502 0 SHEET 2 AA7 7 GLY B 461 VAL B 464 1 N VAL B 464 O ILE B 501 SHEET 3 AA7 7 GLN B 956 TRP B 961 1 O ALA B 959 N ARG B 463 SHEET 4 AA7 7 SER B 897 GLU B 899 1 N PHE B 898 O GLN B 956 SHEET 5 AA7 7 ILE B 861 GLU B 863 1 N TYR B 862 O GLU B 899 SHEET 6 AA7 7 ILE B 650 TYR B 654 1 N LEU B 653 O GLU B 863 SHEET 7 AA7 7 TYR B 577 ILE B 578 1 N ILE B 578 O ARG B 652 SHEET 1 AA8 6 GLN B 691 TYR B 697 0 SHEET 2 AA8 6 GLY B 711 ARG B 717 -1 O THR B 714 N LYS B 694 SHEET 3 AA8 6 MET B 738 SER B 743 -1 O THR B 742 N LEU B 713 SHEET 4 AA8 6 SER B 818 PRO B 826 -1 O TRP B 824 N ALA B 739 SHEET 5 AA8 6 GLU B 768 THR B 775 -1 N LEU B 772 O VAL B 823 SHEET 6 AA8 6 ARG B 794 LYS B 795 -1 O ARG B 794 N TYR B 769 SHEET 1 AA9 4 LEU B 780 SER B 782 0 SHEET 2 AA9 4 GLU B 768 THR B 775 -1 N LEU B 774 O THR B 781 SHEET 3 AA9 4 SER B 818 PRO B 826 -1 O VAL B 823 N LEU B 772 SHEET 4 AA9 4 TYR B 812 LEU B 813 -1 N TYR B 812 O GLY B 819 SHEET 1 AB1 2 VAL B 756 ASN B 759 0 SHEET 2 AB1 2 GLU B 801 PHE B 804 -1 O LEU B 802 N VAL B 758 CRYST1 60.625 126.765 173.356 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016495 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005768 0.00000