HEADER REPLICATION, TRANSFERASE/DNA/RNA 21-FEB-23 8G9L TITLE DNA INITIATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA- TITLE 2 PRIMASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE ALPHA CATALYTIC SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 335-1458; COMPND 5 SYNONYM: DNA POLYMERASE ALPHA CATALYTIC SUBUNIT P180; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA PRIMASE LARGE SUBUNIT; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA TEMPLATE; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: RNA PRIMER; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 GENE: POLA1, POLA; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 11 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 12 ORGANISM_TAXID: 8355; SOURCE 13 GENE: PRIM2.S; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 19 ORGANISM_TAXID: 32630; SOURCE 20 MOL_ID: 4; SOURCE 21 SYNTHETIC: YES; SOURCE 22 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 23 ORGANISM_TAXID: 32630 KEYWDS PRIMASE, DNA POLYMERASE, CHIMERIC RNA-DNA PRIMER, RNA/DNA HYBRID, DNA KEYWDS 2 REPLICATION, DNA SYNTHESIS, REPLICATION, TRANSFERASE-DNA-RNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR E.A.MULLINS,C.L.DURIE,M.D.OHI,W.J.CHAZIN,B.F.EICHMAN REVDAT 6 29-MAY-24 8G9L 1 JRNL REVDAT 5 24-APR-24 8G9L 1 REMARK REVDAT 4 27-MAR-24 8G9L 1 JRNL REVDAT 3 20-MAR-24 8G9L 1 JRNL REVDAT 2 11-OCT-23 8G9L 1 JRNL REMARK REVDAT 1 12-APR-23 8G9L 0 JRNL AUTH E.A.MULLINS,L.E.SALAY,C.L.DURIE,N.P.BRADLEY,J.E.JACKMAN, JRNL AUTH 2 M.D.OHI,W.J.CHAZIN,B.F.EICHMAN JRNL TITL A MECHANISTIC MODEL OF PRIMER SYNTHESIS FROM CATALYTIC JRNL TITL 2 STRUCTURES OF DNA POLYMERASE ALPHA-PRIMASE. JRNL REF NAT.STRUCT.MOL.BIOL. V. 31 777 2024 JRNL REFN ESSN 1545-9985 JRNL PMID 38491139 JRNL DOI 10.1038/S41594-024-01227-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.A.MULLINS,L.E.SALAY,C.L.DURIE,N.P.BRADLEY,J.E.JACKMAN, REMARK 1 AUTH 2 M.D.OHI,W.J.CHAZIN,B.F.EICHMAN REMARK 1 TITL A MECHANISTIC MODEL OF PRIMER SYNTHESIS FROM CATALYTIC REMARK 1 TITL 2 STRUCTURES OF DNA POLYMERASE ALPHA-PRIMASE. REMARK 1 REF BIORXIV 2023 REMARK 1 REFN ISSN 2692-8205 REMARK 1 PMID 36993335 REMARK 1 DOI 10.1101/2023.03.16.533013 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, TOPAZ, LEGINON, MOTIONCORR2, REMARK 3 COOT, CRYOSPARC, RELION, RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.300 REMARK 3 NUMBER OF PARTICLES : 202946 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8G9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000272419. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : POLYMERASE ALPHA-PRIMASE WITH A REMARK 245 DNA INITIATION SUBSTRATE; REMARK 245 POLYMERASE ALPHA; PRIMASE; DNA REMARK 245 INITIATION SUBSTRATE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.90 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : HETEROTETRAMERIC PROTEIN REMARK 245 COMPLEX WITH AN RNA/DNA DUPLEX; HETERODIMER CONSISTING OF POLA1 REMARK 245 AND POLA2; HETERODIMER CONSISTING OF PRIM1 AND PRIM2; RNA/DNA REMARK 245 DUPLEX REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 12845 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5070.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 45000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 332 REMARK 465 ASN A 333 REMARK 465 ALA A 334 REMARK 465 ALA A 335 REMARK 465 ASP A 336 REMARK 465 GLY A 337 REMARK 465 SER A 338 REMARK 465 PHE A 809 REMARK 465 LYS A 810 REMARK 465 LYS A 811 REMARK 465 MET A 812 REMARK 465 GLN A 813 REMARK 465 GLN A 814 REMARK 465 THR A 815 REMARK 465 THR A 816 REMARK 465 VAL A 817 REMARK 465 GLU A 818 REMARK 465 ASP A 819 REMARK 465 ASN A 820 REMARK 465 ASP A 821 REMARK 465 ASP A 822 REMARK 465 MET A 823 REMARK 465 GLY A 824 REMARK 465 THR A 825 REMARK 465 ASP A 826 REMARK 465 GLN A 827 REMARK 465 ASN A 828 REMARK 465 LYS A 829 REMARK 465 ASN A 830 REMARK 465 LYS A 831 REMARK 465 SER A 832 REMARK 465 ARG A 833 REMARK 465 LYS A 834 REMARK 465 LYS A 835 REMARK 465 PRO A 883 REMARK 465 SER A 884 REMARK 465 THR A 885 REMARK 465 GLN A 886 REMARK 465 LYS A 887 REMARK 465 GLY A 888 REMARK 465 GLU A 889 REMARK 465 ASP A 890 REMARK 465 GLN A 891 REMARK 465 ARG A 1243 REMARK 465 ALA A 1244 REMARK 465 HIS A 1245 REMARK 465 ARG A 1246 REMARK 465 HIS A 1247 REMARK 465 TYR A 1248 REMARK 465 GLN A 1249 REMARK 465 GLN A 1250 REMARK 465 ASP A 1251 REMARK 465 GLU A 1252 REMARK 465 GLU A 1253 REMARK 465 ASN A 1254 REMARK 465 ASP A 1255 REMARK 465 ALA A 1256 REMARK 465 LEU A 1257 REMARK 465 LEU A 1258 REMARK 465 GLY A 1259 REMARK 465 GLY A 1260 REMARK 465 PRO A 1261 REMARK 465 SER A 1262 REMARK 465 GLN A 1263 REMARK 465 LEU A 1264 REMARK 465 THR A 1265 REMARK 465 ASP A 1266 REMARK 465 GLU A 1267 REMARK 465 GLU A 1268 REMARK 465 LYS A 1269 REMARK 465 TYR A 1270 REMARK 465 ARG A 1271 REMARK 465 ASP A 1272 REMARK 465 CYS A 1273 REMARK 465 GLU A 1274 REMARK 465 ARG A 1275 REMARK 465 PHE A 1276 REMARK 465 LYS A 1277 REMARK 465 PHE A 1278 REMARK 465 PHE A 1279 REMARK 465 CYS A 1280 REMARK 465 PRO A 1281 REMARK 465 LYS A 1282 REMARK 465 CYS A 1283 REMARK 465 GLY A 1284 REMARK 465 THR A 1285 REMARK 465 GLU A 1286 REMARK 465 ASN A 1287 REMARK 465 ILE A 1288 REMARK 465 TYR A 1289 REMARK 465 ASP A 1290 REMARK 465 ASN A 1291 REMARK 465 VAL A 1292 REMARK 465 PHE A 1293 REMARK 465 ASP A 1294 REMARK 465 GLY A 1295 REMARK 465 SER A 1296 REMARK 465 GLY A 1297 REMARK 465 LEU A 1298 REMARK 465 GLN A 1299 REMARK 465 ILE A 1300 REMARK 465 GLU A 1301 REMARK 465 PRO A 1302 REMARK 465 GLY A 1303 REMARK 465 LEU A 1304 REMARK 465 LYS A 1305 REMARK 465 ARG A 1306 REMARK 465 CYS A 1307 REMARK 465 SER A 1308 REMARK 465 LYS A 1309 REMARK 465 PRO A 1310 REMARK 465 GLU A 1311 REMARK 465 CYS A 1312 REMARK 465 ASP A 1313 REMARK 465 ALA A 1314 REMARK 465 SER A 1315 REMARK 465 PRO A 1316 REMARK 465 LEU A 1317 REMARK 465 ASP A 1318 REMARK 465 TYR A 1319 REMARK 465 VAL A 1320 REMARK 465 ILE A 1321 REMARK 465 GLN A 1322 REMARK 465 VAL A 1323 REMARK 465 HIS A 1324 REMARK 465 ASN A 1325 REMARK 465 LYS A 1326 REMARK 465 LEU A 1327 REMARK 465 LEU A 1328 REMARK 465 LEU A 1329 REMARK 465 ASP A 1330 REMARK 465 ILE A 1331 REMARK 465 ARG A 1332 REMARK 465 ARG A 1333 REMARK 465 TYR A 1334 REMARK 465 ILE A 1335 REMARK 465 LYS A 1336 REMARK 465 LYS A 1337 REMARK 465 TYR A 1338 REMARK 465 TYR A 1339 REMARK 465 SER A 1340 REMARK 465 GLY A 1341 REMARK 465 TRP A 1342 REMARK 465 LEU A 1343 REMARK 465 VAL A 1344 REMARK 465 CYS A 1345 REMARK 465 GLU A 1346 REMARK 465 GLU A 1347 REMARK 465 LYS A 1348 REMARK 465 THR A 1349 REMARK 465 CYS A 1350 REMARK 465 GLN A 1351 REMARK 465 ASN A 1352 REMARK 465 ARG A 1353 REMARK 465 THR A 1354 REMARK 465 ARG A 1355 REMARK 465 ARG A 1356 REMARK 465 LEU A 1357 REMARK 465 PRO A 1358 REMARK 465 LEU A 1359 REMARK 465 SER A 1360 REMARK 465 PHE A 1361 REMARK 465 SER A 1362 REMARK 465 ARG A 1363 REMARK 465 ASN A 1364 REMARK 465 GLY A 1365 REMARK 465 PRO A 1366 REMARK 465 ILE A 1367 REMARK 465 CYS A 1368 REMARK 465 GLN A 1369 REMARK 465 ALA A 1370 REMARK 465 CYS A 1371 REMARK 465 SER A 1372 REMARK 465 LYS A 1373 REMARK 465 ALA A 1374 REMARK 465 THR A 1375 REMARK 465 LEU A 1376 REMARK 465 ARG A 1377 REMARK 465 SER A 1378 REMARK 465 GLU A 1379 REMARK 465 TYR A 1380 REMARK 465 PRO A 1381 REMARK 465 GLU A 1382 REMARK 465 LYS A 1383 REMARK 465 ALA A 1384 REMARK 465 LEU A 1385 REMARK 465 TYR A 1386 REMARK 465 THR A 1387 REMARK 465 GLN A 1388 REMARK 465 LEU A 1389 REMARK 465 CYS A 1390 REMARK 465 PHE A 1391 REMARK 465 TYR A 1392 REMARK 465 ARG A 1393 REMARK 465 PHE A 1394 REMARK 465 ILE A 1395 REMARK 465 PHE A 1396 REMARK 465 ASP A 1397 REMARK 465 TRP A 1398 REMARK 465 ASP A 1399 REMARK 465 TYR A 1400 REMARK 465 ALA A 1401 REMARK 465 LEU A 1402 REMARK 465 GLU A 1403 REMARK 465 LYS A 1404 REMARK 465 VAL A 1405 REMARK 465 VAL A 1406 REMARK 465 SER A 1407 REMARK 465 GLU A 1408 REMARK 465 GLN A 1409 REMARK 465 GLU A 1410 REMARK 465 ARG A 1411 REMARK 465 GLY A 1412 REMARK 465 HIS A 1413 REMARK 465 LEU A 1414 REMARK 465 LYS A 1415 REMARK 465 LYS A 1416 REMARK 465 LYS A 1417 REMARK 465 LEU A 1418 REMARK 465 PHE A 1419 REMARK 465 GLN A 1420 REMARK 465 GLU A 1421 REMARK 465 SER A 1422 REMARK 465 GLU A 1423 REMARK 465 ASN A 1424 REMARK 465 GLN A 1425 REMARK 465 TYR A 1426 REMARK 465 LYS A 1427 REMARK 465 LYS A 1428 REMARK 465 LEU A 1429 REMARK 465 LYS A 1430 REMARK 465 SER A 1431 REMARK 465 THR A 1432 REMARK 465 VAL A 1433 REMARK 465 ASP A 1434 REMARK 465 GLN A 1435 REMARK 465 VAL A 1436 REMARK 465 LEU A 1437 REMARK 465 SER A 1438 REMARK 465 ARG A 1439 REMARK 465 SER A 1440 REMARK 465 GLY A 1441 REMARK 465 TYR A 1442 REMARK 465 SER A 1443 REMARK 465 GLU A 1444 REMARK 465 VAL A 1445 REMARK 465 ASN A 1446 REMARK 465 LEU A 1447 REMARK 465 SER A 1448 REMARK 465 LYS A 1449 REMARK 465 LEU A 1450 REMARK 465 PHE A 1451 REMARK 465 GLN A 1452 REMARK 465 THR A 1453 REMARK 465 LEU A 1454 REMARK 465 ASN A 1455 REMARK 465 THR A 1456 REMARK 465 ILE A 1457 REMARK 465 LYS A 1458 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 PHE B 3 REMARK 465 SER B 4 REMARK 465 ARG B 5 REMARK 465 ASP B 6 REMARK 465 ARG B 7 REMARK 465 LYS B 8 REMARK 465 TYR B 9 REMARK 465 ARG B 10 REMARK 465 HIS B 11 REMARK 465 ASN B 12 REMARK 465 THR B 13 REMARK 465 ARG B 14 REMARK 465 LEU B 15 REMARK 465 THR B 16 REMARK 465 GLY B 17 REMARK 465 ASP B 18 REMARK 465 ARG B 19 REMARK 465 LYS B 20 REMARK 465 GLY B 21 REMARK 465 ASP B 22 REMARK 465 LEU B 23 REMARK 465 TYR B 24 REMARK 465 PRO B 25 REMARK 465 SER B 26 REMARK 465 SER B 27 REMARK 465 LEU B 28 REMARK 465 GLN B 29 REMARK 465 PHE B 30 REMARK 465 TYR B 31 REMARK 465 GLN B 32 REMARK 465 HIS B 33 REMARK 465 PRO B 34 REMARK 465 PRO B 35 REMARK 465 THR B 36 REMARK 465 GLU B 37 REMARK 465 ASN B 38 REMARK 465 ILE B 39 REMARK 465 SER B 40 REMARK 465 LEU B 41 REMARK 465 ILE B 42 REMARK 465 GLU B 43 REMARK 465 PHE B 44 REMARK 465 GLU B 45 REMARK 465 THR B 46 REMARK 465 PHE B 47 REMARK 465 ALA B 48 REMARK 465 ILE B 49 REMARK 465 GLU B 50 REMARK 465 ARG B 51 REMARK 465 LEU B 52 REMARK 465 LYS B 53 REMARK 465 LEU B 54 REMARK 465 LEU B 55 REMARK 465 LYS B 56 REMARK 465 ALA B 57 REMARK 465 VAL B 58 REMARK 465 GLU B 59 REMARK 465 ASN B 60 REMARK 465 LEU B 61 REMARK 465 GLY B 62 REMARK 465 VAL B 63 REMARK 465 SER B 64 REMARK 465 TYR B 65 REMARK 465 VAL B 66 REMARK 465 LYS B 67 REMARK 465 ASN B 68 REMARK 465 SER B 69 REMARK 465 GLU B 70 REMARK 465 GLU B 71 REMARK 465 TYR B 72 REMARK 465 SER B 73 REMARK 465 LYS B 74 REMARK 465 LYS B 75 REMARK 465 LEU B 76 REMARK 465 GLU B 77 REMARK 465 LEU B 78 REMARK 465 GLU B 79 REMARK 465 LEU B 80 REMARK 465 ARG B 81 REMARK 465 LYS B 82 REMARK 465 LEU B 83 REMARK 465 LYS B 84 REMARK 465 PHE B 85 REMARK 465 PRO B 86 REMARK 465 TYR B 87 REMARK 465 ARG B 88 REMARK 465 PRO B 89 REMARK 465 LEU B 90 REMARK 465 HIS B 91 REMARK 465 GLU B 92 REMARK 465 GLU B 93 REMARK 465 ILE B 94 REMARK 465 SER B 95 REMARK 465 ASP B 96 REMARK 465 ASP B 97 REMARK 465 VAL B 98 REMARK 465 TYR B 99 REMARK 465 ASP B 100 REMARK 465 LEU B 101 REMARK 465 ARG B 102 REMARK 465 ARG B 103 REMARK 465 LYS B 104 REMARK 465 ASP B 105 REMARK 465 HIS B 106 REMARK 465 ILE B 107 REMARK 465 SER B 108 REMARK 465 HIS B 109 REMARK 465 PHE B 110 REMARK 465 ILE B 111 REMARK 465 LEU B 112 REMARK 465 ARG B 113 REMARK 465 LEU B 114 REMARK 465 ALA B 115 REMARK 465 TYR B 116 REMARK 465 CYS B 117 REMARK 465 GLN B 118 REMARK 465 SER B 119 REMARK 465 GLU B 120 REMARK 465 ASP B 121 REMARK 465 LEU B 122 REMARK 465 ARG B 123 REMARK 465 ARG B 124 REMARK 465 TRP B 125 REMARK 465 PHE B 126 REMARK 465 ILE B 127 REMARK 465 GLN B 128 REMARK 465 GLN B 129 REMARK 465 GLU B 130 REMARK 465 MET B 131 REMARK 465 ASP B 132 REMARK 465 LEU B 133 REMARK 465 PHE B 134 REMARK 465 LYS B 135 REMARK 465 PHE B 136 REMARK 465 ARG B 137 REMARK 465 PHE B 138 REMARK 465 GLY B 139 REMARK 465 LEU B 140 REMARK 465 LEU B 141 REMARK 465 THR B 142 REMARK 465 LYS B 143 REMARK 465 GLU B 144 REMARK 465 SER B 145 REMARK 465 VAL B 146 REMARK 465 GLN B 147 REMARK 465 GLU B 148 REMARK 465 PHE B 149 REMARK 465 LEU B 150 REMARK 465 LYS B 151 REMARK 465 LEU B 152 REMARK 465 ASN B 153 REMARK 465 ASP B 154 REMARK 465 LEU B 155 REMARK 465 GLN B 156 REMARK 465 TYR B 157 REMARK 465 VAL B 158 REMARK 465 ALA B 159 REMARK 465 ILE B 160 REMARK 465 SER B 161 REMARK 465 GLU B 162 REMARK 465 ASP B 163 REMARK 465 GLU B 164 REMARK 465 LYS B 165 REMARK 465 ASN B 166 REMARK 465 MET B 167 REMARK 465 HIS B 168 REMARK 465 LYS B 169 REMARK 465 GLU B 170 REMARK 465 ASP B 171 REMARK 465 LEU B 172 REMARK 465 MET B 173 REMARK 465 ASN B 174 REMARK 465 SER B 175 REMARK 465 SER B 176 REMARK 465 PHE B 177 REMARK 465 GLY B 178 REMARK 465 LEU B 179 REMARK 465 SER B 180 REMARK 465 LEU B 181 REMARK 465 THR B 182 REMARK 465 LYS B 183 REMARK 465 MET B 184 REMARK 465 GLU B 185 REMARK 465 ASP B 186 REMARK 465 THR B 187 REMARK 465 GLU B 188 REMARK 465 PHE B 189 REMARK 465 TYR B 190 REMARK 465 LYS B 191 REMARK 465 VAL B 192 REMARK 465 PRO B 193 REMARK 465 PHE B 194 REMARK 465 GLN B 195 REMARK 465 ALA B 196 REMARK 465 ALA B 197 REMARK 465 LEU B 198 REMARK 465 ASP B 199 REMARK 465 LEU B 200 REMARK 465 VAL B 201 REMARK 465 ARG B 202 REMARK 465 PRO B 203 REMARK 465 ARG B 204 REMARK 465 LYS B 205 REMARK 465 VAL B 206 REMARK 465 PHE B 207 REMARK 465 LEU B 208 REMARK 465 TRP B 209 REMARK 465 ARG B 210 REMARK 465 GLY B 211 REMARK 465 PHE B 212 REMARK 465 ALA B 213 REMARK 465 PHE B 214 REMARK 465 ILE B 215 REMARK 465 PRO B 216 REMARK 465 HIS B 217 REMARK 465 LYS B 218 REMARK 465 ASP B 219 REMARK 465 ILE B 220 REMARK 465 VAL B 221 REMARK 465 SER B 222 REMARK 465 ILE B 223 REMARK 465 VAL B 224 REMARK 465 LEU B 225 REMARK 465 ASN B 226 REMARK 465 ASP B 227 REMARK 465 PHE B 228 REMARK 465 ARG B 229 REMARK 465 ALA B 230 REMARK 465 LYS B 231 REMARK 465 LEU B 232 REMARK 465 SER B 233 REMARK 465 LYS B 234 REMARK 465 ALA B 235 REMARK 465 LEU B 236 REMARK 465 ALA B 237 REMARK 465 LEU B 238 REMARK 465 SER B 239 REMARK 465 ALA B 240 REMARK 465 ARG B 241 REMARK 465 SER B 242 REMARK 465 LEU B 243 REMARK 465 PRO B 244 REMARK 465 VAL B 245 REMARK 465 VAL B 246 REMARK 465 GLN B 247 REMARK 465 SER B 248 REMARK 465 ASP B 249 REMARK 465 GLU B 250 REMARK 465 ARG B 251 REMARK 465 LEU B 252 REMARK 465 GLN B 253 REMARK 465 PRO B 254 REMARK 465 LEU B 255 REMARK 465 LEU B 256 REMARK 465 ASN B 257 REMARK 465 HIS B 258 REMARK 465 LEU B 259 REMARK 465 SER B 260 REMARK 465 HIS B 261 REMARK 465 SER B 262 REMARK 465 TYR B 263 REMARK 465 ILE B 264 REMARK 465 GLY B 265 REMARK 465 GLN B 266 REMARK 465 ASP B 267 REMARK 465 PHE B 268 REMARK 465 SER B 269 REMARK 465 SER B 270 REMARK 465 GLN B 271 REMARK 465 SER B 272 REMARK 465 ASN B 273 REMARK 465 THR B 274 REMARK 465 GLY B 275 REMARK 465 LYS B 276 REMARK 465 GLY B 463 REMARK 465 SER B 464 REMARK 465 ARG B 465 REMARK 465 GLU B 466 REMARK 465 ILE B 467 REMARK 465 LYS B 468 REMARK 465 LYS B 469 REMARK 465 GLU B 470 REMARK 465 GLN B 471 REMARK 465 THR B 472 REMARK 465 ALA B 473 REMARK 465 ARG B 474 REMARK 465 ASP B 475 REMARK 465 SER B 476 REMARK 465 PRO B 477 REMARK 465 ALA B 478 REMARK 465 VAL B 479 REMARK 465 THR B 480 REMARK 465 ALA B 481 REMARK 465 SER B 482 REMARK 465 GLN B 483 REMARK 465 LEU B 484 REMARK 465 SER B 485 REMARK 465 SER B 486 REMARK 465 SER B 487 REMARK 465 SER B 488 REMARK 465 SER B 489 REMARK 465 SER B 490 REMARK 465 ALA B 491 REMARK 465 SER B 492 REMARK 465 ILE B 493 REMARK 465 PRO B 494 REMARK 465 LYS B 495 REMARK 465 SER B 496 REMARK 465 GLN B 497 REMARK 465 SER B 498 REMARK 465 SER B 499 REMARK 465 ALA B 500 REMARK 465 PRO B 501 REMARK 465 GLU B 502 REMARK 465 MET B 503 REMARK 465 GLU B 504 REMARK 465 ASP B 505 REMARK 465 LEU B 506 REMARK 465 GLU B 507 REMARK 465 GLN B 508 REMARK 465 ILE B 509 REMARK 465 PHE B 510 REMARK 465 SER B 511 REMARK 465 GLU B 512 REMARK 465 TYR B 513 REMARK 465 DT C 1 REMARK 465 DG C 2 REMARK 465 DT C 3 REMARK 465 DA C 4 REMARK 465 DT C 5 REMARK 465 DG C 6 REMARK 465 DT C 7 REMARK 465 DA C 8 REMARK 465 DT C 9 REMARK 465 DG C 10 REMARK 465 DT C 11 REMARK 465 DA C 12 REMARK 465 DT C 13 REMARK 465 DG C 14 REMARK 465 DT C 15 REMARK 465 DC C 16 REMARK 465 DG C 17 REMARK 465 DC C 18 REMARK 465 DT C 19 REMARK 465 DA C 20 REMARK 465 DA C 21 REMARK 465 DG C 22 REMARK 465 DT C 23 REMARK 465 DA C 40 REMARK 465 DT C 41 REMARK 465 DG C 42 REMARK 465 DT C 43 REMARK 465 DA C 44 REMARK 465 DT C 45 REMARK 465 DG C 46 REMARK 465 DT C 47 REMARK 465 DA C 48 REMARK 465 DT C 49 REMARK 465 DG C 50 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 31 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 402 -155.59 62.50 REMARK 500 GLU A 442 34.84 -99.41 REMARK 500 SER A 497 -178.90 -171.17 REMARK 500 PRO A 595 44.84 -82.84 REMARK 500 ASP A 630 65.62 61.71 REMARK 500 SER A 677 -121.00 45.90 REMARK 500 ILE A 715 -60.23 -98.98 REMARK 500 THR A 999 -16.25 71.18 REMARK 500 GLN A1241 58.72 -94.22 REMARK 500 VAL B 350 -63.29 -106.86 REMARK 500 SER B 379 -166.25 -78.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 859 OD1 REMARK 620 2 PHE A 860 O 76.1 REMARK 620 3 ASP A1000 OD2 87.4 91.4 REMARK 620 4 DGT A1501 O1G 87.9 89.8 174.8 REMARK 620 5 DGT A1501 O2B 166.1 90.2 95.2 89.9 REMARK 620 6 DGT A1501 O1A 107.6 175.8 86.8 92.4 86.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 601 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 293 SG REMARK 620 2 SF4 B 601 S1 111.9 REMARK 620 3 SF4 B 601 S2 116.6 104.1 REMARK 620 4 SF4 B 601 S3 114.6 104.2 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 601 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 373 SG REMARK 620 2 SF4 B 601 S2 113.8 REMARK 620 3 SF4 B 601 S3 116.2 104.0 REMARK 620 4 SF4 B 601 S4 113.1 104.3 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 601 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 390 SG REMARK 620 2 SF4 B 601 S1 113.2 REMARK 620 3 SF4 B 601 S3 114.6 104.2 REMARK 620 4 SF4 B 601 S4 115.4 104.0 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 601 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 430 SG REMARK 620 2 SF4 B 601 S1 114.3 REMARK 620 3 SF4 B 601 S2 113.7 104.1 REMARK 620 4 SF4 B 601 S4 115.1 104.1 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GTP D 1 O1G REMARK 620 2 GTP D 1 O2B 91.9 REMARK 620 3 GTP D 1 O1A 89.9 90.3 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-29871 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29862 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29864 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29872 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29873 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29886 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29888 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29889 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-29891 RELATED DB: EMDB DBREF 8G9L A 335 1458 UNP Q9DE46 DPOLA_XENLA 335 1458 DBREF1 8G9L B 1 513 UNP A0A1L8G3G3_XENLA DBREF2 8G9L B A0A1L8G3G3 1 513 DBREF 8G9L C 1 50 PDB 8G9L 8G9L 1 50 DBREF 8G9L D 1 9 PDB 8G9L 8G9L 1 9 SEQADV 8G9L SER A 332 UNP Q9DE46 EXPRESSION TAG SEQADV 8G9L ASN A 333 UNP Q9DE46 EXPRESSION TAG SEQADV 8G9L ALA A 334 UNP Q9DE46 EXPRESSION TAG SEQRES 1 A 1127 SER ASN ALA ALA ASP GLY SER GLN VAL PHE ARG PHE TYR SEQRES 2 A 1127 TRP LEU ASP ALA TYR GLU ASP GLN TYR SER GLN PRO GLY SEQRES 3 A 1127 VAL VAL TYR LEU PHE GLY LYS VAL TRP ILE GLU SER ALA SEQRES 4 A 1127 ASP ALA TYR VAL SER CYS CYS VAL SER VAL LYS ASN ILE SEQRES 5 A 1127 GLU ARG THR VAL TYR LEU LEU PRO ARG GLU ASN ARG VAL SEQRES 6 A 1127 GLN LEU SER THR GLY LYS ASP THR GLY ALA PRO VAL SER SEQRES 7 A 1127 MET MET HIS VAL TYR GLN GLU PHE ASN GLU ALA VAL ALA SEQRES 8 A 1127 GLU LYS TYR LYS ILE MET LYS PHE LYS SER LYS LYS VAL SEQRES 9 A 1127 ASP LYS ASP TYR ALA PHE GLU ILE PRO ASP VAL PRO ALA SEQRES 10 A 1127 SER SER GLU TYR LEU GLU VAL ARG TYR SER ALA ASP SER SEQRES 11 A 1127 PRO GLN LEU PRO GLN ASP LEU LYS GLY GLU THR PHE SER SEQRES 12 A 1127 HIS VAL PHE GLY THR ASN THR SER SER LEU GLU LEU PHE SEQRES 13 A 1127 LEU LEU SER ARG LYS ILE LYS GLY PRO SER TRP LEU GLU SEQRES 14 A 1127 ILE LYS SER PRO GLN LEU SER SER GLN PRO MET SER TRP SEQRES 15 A 1127 CYS LYS VAL GLU ALA VAL VAL THR ARG PRO ASP GLN VAL SEQRES 16 A 1127 SER VAL VAL LYS ASP LEU ALA PRO PRO PRO VAL VAL VAL SEQRES 17 A 1127 LEU SER LEU SER MET LYS THR VAL GLN ASN ALA LYS THR SEQRES 18 A 1127 HIS GLN ASN GLU ILE VAL ALA ILE ALA ALA LEU VAL HIS SEQRES 19 A 1127 HIS THR PHE PRO LEU ASP LYS ALA PRO PRO GLN PRO PRO SEQRES 20 A 1127 PHE GLN THR HIS PHE CYS VAL LEU SER LYS LEU ASN ASP SEQRES 21 A 1127 CYS ILE PHE PRO TYR ASP TYR ASN GLU ALA VAL LYS GLN SEQRES 22 A 1127 LYS ASN ALA ASN ILE GLU ILE ALA LEU THR GLU ARG THR SEQRES 23 A 1127 LEU LEU GLY PHE PHE LEU ALA LYS ILE HIS LYS ILE ASP SEQRES 24 A 1127 PRO ASP VAL ILE VAL GLY HIS ASP ILE TYR GLY PHE ASP SEQRES 25 A 1127 LEU GLU VAL LEU LEU GLN ARG ILE ASN SER CYS LYS VAL SEQRES 26 A 1127 PRO PHE TRP SER LYS ILE GLY ARG LEU ARG ARG SER VAL SEQRES 27 A 1127 MET PRO LYS LEU GLY GLY ARG SER GLY PHE ALA GLU ARG SEQRES 28 A 1127 ASN ALA ALA CYS GLY ARG ILE ILE CYS ASP ILE GLU ILE SEQRES 29 A 1127 SER ALA LYS GLU LEU ILE ARG CYS LYS SER TYR HIS LEU SEQRES 30 A 1127 SER GLU LEU VAL HIS GLN ILE LEU LYS ALA GLU ARG VAL SEQRES 31 A 1127 VAL ILE PRO PRO GLU ASN ILE ARG ASN ALA TYR ASN ASP SEQRES 32 A 1127 SER VAL HIS LEU LEU TYR MET LEU GLU ASN THR TRP ILE SEQRES 33 A 1127 ASP ALA LYS PHE ILE LEU GLN ILE MET CYS GLU LEU ASN SEQRES 34 A 1127 VAL LEU PRO LEU ALA LEU GLN ILE THR ASN ILE ALA GLY SEQRES 35 A 1127 ASN VAL MET SER ARG THR LEU MET GLY GLY ARG SER GLU SEQRES 36 A 1127 ARG ASN GLU TYR LEU LEU LEU HIS ALA PHE THR GLU ASN SEQRES 37 A 1127 ASN PHE ILE VAL PRO ASP LYS PRO VAL PHE LYS LYS MET SEQRES 38 A 1127 GLN GLN THR THR VAL GLU ASP ASN ASP ASP MET GLY THR SEQRES 39 A 1127 ASP GLN ASN LYS ASN LYS SER ARG LYS LYS ALA ALA TYR SEQRES 40 A 1127 ALA GLY GLY LEU VAL LEU GLU PRO LYS VAL GLY PHE TYR SEQRES 41 A 1127 ASP LYS PHE ILE LEU LEU LEU ASP PHE ASN SER LEU TYR SEQRES 42 A 1127 PRO SER ILE ILE GLN GLU TYR ASN ILE CYS PHE THR THR SEQRES 43 A 1127 VAL HIS ARG GLU ALA PRO SER THR GLN LYS GLY GLU ASP SEQRES 44 A 1127 GLN ASP GLU ILE PRO GLU LEU PRO HIS SER ASP LEU GLU SEQRES 45 A 1127 MET GLY ILE LEU PRO ARG GLU ILE ARG LYS LEU VAL GLU SEQRES 46 A 1127 ARG ARG ARG HIS VAL LYS GLN LEU MET LYS GLN PRO ASP SEQRES 47 A 1127 LEU ASN PRO ASP LEU TYR LEU GLN TYR ASP ILE ARG GLN SEQRES 48 A 1127 LYS ALA LEU LYS LEU THR ALA ASN SER MET TYR GLY CYS SEQRES 49 A 1127 LEU GLY PHE SER TYR SER ARG PHE TYR ALA LYS PRO LEU SEQRES 50 A 1127 ALA ALA LEU VAL THR HIS GLN GLY ARG GLU ILE LEU LEU SEQRES 51 A 1127 HIS THR LYS GLU MET VAL GLN LYS MET ASN LEU GLU VAL SEQRES 52 A 1127 ILE TYR GLY ASP THR ASP SER ILE MET ILE ASN THR ASN SEQRES 53 A 1127 CYS ASN ASN LEU GLU GLU VAL PHE LYS LEU GLY ASN ARG SEQRES 54 A 1127 VAL LYS SER GLU ILE ASN LYS SER TYR LYS LEU LEU GLU SEQRES 55 A 1127 ILE ASP ILE ASP GLY ILE PHE LYS SER LEU LEU LEU LEU SEQRES 56 A 1127 LYS LYS LYS LYS TYR ALA ALA LEU THR VAL GLU PRO THR SEQRES 57 A 1127 GLY ASP GLY LYS TYR VAL THR LYS GLN GLU LEU LYS GLY SEQRES 58 A 1127 LEU ASP ILE VAL ARG ARG ASP TRP CYS GLU LEU ALA LYS SEQRES 59 A 1127 GLN ALA GLY ASN TYR VAL ILE SER GLN ILE LEU SER ASP SEQRES 60 A 1127 GLN PRO ARG ASP SER ILE VAL GLU ASN ILE GLN LYS LYS SEQRES 61 A 1127 LEU THR GLU ILE GLY GLU ASN VAL THR ASN GLY THR VAL SEQRES 62 A 1127 PRO ILE THR GLN TYR GLU ILE ASN LYS ALA LEU THR LYS SEQRES 63 A 1127 ASP PRO GLN ASP TYR PRO ASP LYS LYS SER LEU PRO HIS SEQRES 64 A 1127 VAL HIS VAL ALA LEU TRP ILE ASN SER GLN GLY GLY ARG SEQRES 65 A 1127 LYS VAL LYS ALA GLY ASP THR ILE SER TYR VAL ILE CYS SEQRES 66 A 1127 GLN ASP GLY SER ASN LEU SER ALA SER GLN ARG ALA TYR SEQRES 67 A 1127 ALA GLN GLU GLN LEU GLN LYS GLN GLU ASN LEU SER ILE SEQRES 68 A 1127 ASP THR GLN TYR TYR LEU SER GLN GLN VAL HIS PRO VAL SEQRES 69 A 1127 VAL ALA ARG ILE CYS GLU PRO ILE ASP GLY ILE ASP SER SEQRES 70 A 1127 ALA LEU ILE ALA MET TRP LEU GLY LEU ASP PRO SER GLN SEQRES 71 A 1127 PHE ARG ALA HIS ARG HIS TYR GLN GLN ASP GLU GLU ASN SEQRES 72 A 1127 ASP ALA LEU LEU GLY GLY PRO SER GLN LEU THR ASP GLU SEQRES 73 A 1127 GLU LYS TYR ARG ASP CYS GLU ARG PHE LYS PHE PHE CYS SEQRES 74 A 1127 PRO LYS CYS GLY THR GLU ASN ILE TYR ASP ASN VAL PHE SEQRES 75 A 1127 ASP GLY SER GLY LEU GLN ILE GLU PRO GLY LEU LYS ARG SEQRES 76 A 1127 CYS SER LYS PRO GLU CYS ASP ALA SER PRO LEU ASP TYR SEQRES 77 A 1127 VAL ILE GLN VAL HIS ASN LYS LEU LEU LEU ASP ILE ARG SEQRES 78 A 1127 ARG TYR ILE LYS LYS TYR TYR SER GLY TRP LEU VAL CYS SEQRES 79 A 1127 GLU GLU LYS THR CYS GLN ASN ARG THR ARG ARG LEU PRO SEQRES 80 A 1127 LEU SER PHE SER ARG ASN GLY PRO ILE CYS GLN ALA CYS SEQRES 81 A 1127 SER LYS ALA THR LEU ARG SER GLU TYR PRO GLU LYS ALA SEQRES 82 A 1127 LEU TYR THR GLN LEU CYS PHE TYR ARG PHE ILE PHE ASP SEQRES 83 A 1127 TRP ASP TYR ALA LEU GLU LYS VAL VAL SER GLU GLN GLU SEQRES 84 A 1127 ARG GLY HIS LEU LYS LYS LYS LEU PHE GLN GLU SER GLU SEQRES 85 A 1127 ASN GLN TYR LYS LYS LEU LYS SER THR VAL ASP GLN VAL SEQRES 86 A 1127 LEU SER ARG SER GLY TYR SER GLU VAL ASN LEU SER LYS SEQRES 87 A 1127 LEU PHE GLN THR LEU ASN THR ILE LYS SEQRES 1 B 513 MET LEU PHE SER ARG ASP ARG LYS TYR ARG HIS ASN THR SEQRES 2 B 513 ARG LEU THR GLY ASP ARG LYS GLY ASP LEU TYR PRO SER SEQRES 3 B 513 SER LEU GLN PHE TYR GLN HIS PRO PRO THR GLU ASN ILE SEQRES 4 B 513 SER LEU ILE GLU PHE GLU THR PHE ALA ILE GLU ARG LEU SEQRES 5 B 513 LYS LEU LEU LYS ALA VAL GLU ASN LEU GLY VAL SER TYR SEQRES 6 B 513 VAL LYS ASN SER GLU GLU TYR SER LYS LYS LEU GLU LEU SEQRES 7 B 513 GLU LEU ARG LYS LEU LYS PHE PRO TYR ARG PRO LEU HIS SEQRES 8 B 513 GLU GLU ILE SER ASP ASP VAL TYR ASP LEU ARG ARG LYS SEQRES 9 B 513 ASP HIS ILE SER HIS PHE ILE LEU ARG LEU ALA TYR CYS SEQRES 10 B 513 GLN SER GLU ASP LEU ARG ARG TRP PHE ILE GLN GLN GLU SEQRES 11 B 513 MET ASP LEU PHE LYS PHE ARG PHE GLY LEU LEU THR LYS SEQRES 12 B 513 GLU SER VAL GLN GLU PHE LEU LYS LEU ASN ASP LEU GLN SEQRES 13 B 513 TYR VAL ALA ILE SER GLU ASP GLU LYS ASN MET HIS LYS SEQRES 14 B 513 GLU ASP LEU MET ASN SER SER PHE GLY LEU SER LEU THR SEQRES 15 B 513 LYS MET GLU ASP THR GLU PHE TYR LYS VAL PRO PHE GLN SEQRES 16 B 513 ALA ALA LEU ASP LEU VAL ARG PRO ARG LYS VAL PHE LEU SEQRES 17 B 513 TRP ARG GLY PHE ALA PHE ILE PRO HIS LYS ASP ILE VAL SEQRES 18 B 513 SER ILE VAL LEU ASN ASP PHE ARG ALA LYS LEU SER LYS SEQRES 19 B 513 ALA LEU ALA LEU SER ALA ARG SER LEU PRO VAL VAL GLN SEQRES 20 B 513 SER ASP GLU ARG LEU GLN PRO LEU LEU ASN HIS LEU SER SEQRES 21 B 513 HIS SER TYR ILE GLY GLN ASP PHE SER SER GLN SER ASN SEQRES 22 B 513 THR GLY LYS ILE SER LEU GLU GLN ILE ASP GLY PHE ALA SEQRES 23 B 513 ALA LYS SER PHE PRO LEU CYS MET ARG GLN LEU HIS LYS SEQRES 24 B 513 SER LEU ARG GLU ASN HIS HIS LEU ARG HIS GLY GLY ARG SEQRES 25 B 513 MET GLN TYR GLY LEU PHE LEU LYS GLY ILE GLY LEU THR SEQRES 26 B 513 LEU GLU GLN ALA LEU GLN PHE TRP ARG LEU GLU PHE THR SEQRES 27 B 513 LYS GLY LYS VAL ASP SER GLU LYS PHE ASP LYS VAL TYR SEQRES 28 B 513 ALA TYR SER ILE ARG HIS ASN TYR GLY LYS GLU GLY LYS SEQRES 29 B 513 ARG THR ASP TYR THR PRO TYR SER CYS MET LYS VAL ILE SEQRES 30 B 513 LEU SER ASN PRO PRO SER GLN GLY ASP TYR HIS GLY CYS SEQRES 31 B 513 PRO PHE ARG HIS SER ASP PRO GLU LEU LEU LYS GLN LYS SEQRES 32 B 513 LEU GLN SER PHE LYS VAL PRO SER SER GLY ILE ASN GLN SEQRES 33 B 513 ILE LEU GLU LEU VAL LYS GLY MET HIS TYR GLN LEU ALA SEQRES 34 B 513 CYS GLN LYS TYR PHE GLU LEU THR HIS SER VAL ASP ASP SEQRES 35 B 513 CYS GLY PHE SER LEU ASN HIS PRO ASN GLN TYR PHE ALA SEQRES 36 B 513 GLU SER GLN LYS LEU LEU THR GLY SER ARG GLU ILE LYS SEQRES 37 B 513 LYS GLU GLN THR ALA ARG ASP SER PRO ALA VAL THR ALA SEQRES 38 B 513 SER GLN LEU SER SER SER SER SER SER ALA SER ILE PRO SEQRES 39 B 513 LYS SER GLN SER SER ALA PRO GLU MET GLU ASP LEU GLU SEQRES 40 B 513 GLN ILE PHE SER GLU TYR SEQRES 1 C 50 DT DG DT DA DT DG DT DA DT DG DT DA DT SEQRES 2 C 50 DG DT DC DG DC DT DA DA DG DT DT DC DA SEQRES 3 C 50 DC DG DC DA DG DT DA DT DC DC DT DG DT SEQRES 4 C 50 DA DT DG DT DA DT DG DT DA DT DG SEQRES 1 D 9 GTP G A U A C U G DOC HET GTP D 1 43 HET DOC D 9 30 HET DGT A1501 43 HET MG A1502 1 HET SF4 B 601 8 HET MG D 101 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM DGT 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM SF4 IRON/SULFUR CLUSTER FORMUL 4 GTP C10 H16 N5 O14 P3 FORMUL 4 DOC C9 H14 N3 O6 P FORMUL 5 DGT C10 H16 N5 O13 P3 FORMUL 6 MG 2(MG 2+) FORMUL 7 SF4 FE4 S4 HELIX 1 AA1 SER A 409 ALA A 420 1 12 HELIX 2 AA2 ALA A 420 TYR A 425 1 6 HELIX 3 AA3 SER A 482 ARG A 491 1 10 HELIX 4 AA4 ARG A 522 ASP A 524 5 3 HELIX 5 AA5 ASP A 597 ASN A 606 1 10 HELIX 6 AA6 THR A 614 ASP A 630 1 17 HELIX 7 AA7 PHE A 642 LYS A 655 1 14 HELIX 8 AA8 PHE A 658 GLY A 663 5 6 HELIX 9 AA9 GLY A 678 ALA A 685 1 8 HELIX 10 AB1 ILE A 693 ILE A 701 1 9 HELIX 11 AB2 HIS A 707 ILE A 715 1 9 HELIX 12 AB3 PRO A 724 ALA A 731 1 8 HELIX 13 AB4 ASP A 734 ASN A 760 1 27 HELIX 14 AB5 ASN A 760 GLY A 773 1 14 HELIX 15 AB6 VAL A 775 MET A 781 1 7 HELIX 16 AB7 ARG A 784 ASN A 799 1 16 HELIX 17 AB8 SER A 862 ASN A 872 1 11 HELIX 18 AB9 GLY A 905 LYS A 926 1 22 HELIX 19 AC1 ASN A 931 CYS A 955 1 25 HELIX 20 AC2 LEU A 956 PHE A 958 5 3 HELIX 21 AC3 ALA A 965 MET A 990 1 26 HELIX 22 AC4 ASN A 1010 LYS A 1027 1 18 HELIX 23 AC5 LEU A 1073 ARG A 1077 5 5 HELIX 24 AC6 CYS A 1081 LEU A 1096 1 16 HELIX 25 AC7 PRO A 1100 ASN A 1121 1 22 HELIX 26 AC8 PRO A 1125 GLU A 1130 5 6 HELIX 27 AC9 LEU A 1148 GLN A 1160 1 13 HELIX 28 AD1 SER A 1183 GLN A 1186 5 4 HELIX 29 AD2 ALA A 1190 GLN A 1197 1 8 HELIX 30 AD3 ASP A 1203 GLN A 1211 1 9 HELIX 31 AD4 GLN A 1211 GLU A 1221 1 11 HELIX 32 AD5 ASP A 1227 LEU A 1235 1 9 HELIX 33 AD6 SER B 278 LYS B 288 1 11 HELIX 34 AD7 PRO B 291 HIS B 305 1 15 HELIX 35 AD8 ARG B 308 GLY B 323 1 16 HELIX 36 AD9 THR B 325 LYS B 339 1 15 HELIX 37 AE1 ASP B 343 TYR B 359 1 17 HELIX 38 AE2 SER B 372 SER B 379 1 8 HELIX 39 AE3 CYS B 390 SER B 395 1 6 HELIX 40 AE4 ASP B 396 PHE B 407 1 12 HELIX 41 AE5 PRO B 410 GLY B 423 1 14 HELIX 42 AE6 HIS B 425 HIS B 438 1 14 HELIX 43 AE7 HIS B 449 THR B 462 1 14 SHEET 1 AA1 6 VAL A 516 VAL A 520 0 SHEET 2 AA1 6 ALA A 372 VAL A 380 1 N SER A 379 O VAL A 520 SHEET 3 AA1 6 VAL A 359 ILE A 367 -1 N ILE A 367 O ALA A 372 SHEET 4 AA1 6 PHE A 341 TYR A 349 -1 N TYR A 349 O TYR A 360 SHEET 5 AA1 6 SER A 497 ILE A 501 -1 O LEU A 499 N PHE A 343 SHEET 6 AA1 6 VAL A 526 VAL A 529 -1 O VAL A 529 N TRP A 498 SHEET 1 AA2 4 LYS A 431 ASP A 438 0 SHEET 2 AA2 4 SER A 449 TYR A 457 -1 O ARG A 456 N LYS A 431 SHEET 3 AA2 4 ARG A 385 PRO A 391 -1 N VAL A 387 O VAL A 455 SHEET 4 AA2 4 PHE A 473 PHE A 477 -1 O SER A 474 N LEU A 390 SHEET 1 AA3 2 ASN A 394 VAL A 396 0 SHEET 2 AA3 2 ASP A 403 PRO A 407 -1 O ALA A 406 N ARG A 395 SHEET 1 AA4 6 ILE A 609 ALA A 612 0 SHEET 2 AA4 6 THR A 581 SER A 587 1 N LEU A 586 O ALA A 612 SHEET 3 AA4 6 GLN A 554 PHE A 568 -1 N VAL A 558 O SER A 587 SHEET 4 AA4 6 VAL A 537 ASN A 549 -1 N VAL A 547 O GLU A 556 SHEET 5 AA4 6 VAL A 633 GLY A 636 1 O VAL A 635 N LEU A 540 SHEET 6 AA4 6 ILE A 689 ASP A 692 1 O ILE A 689 N ILE A 634 SHEET 1 AA5 5 GLY A 849 TYR A 851 0 SHEET 2 AA5 5 ILE A1034 LYS A1047 -1 O LEU A1043 N TYR A 851 SHEET 3 AA5 5 ILE A 855 PHE A 860 -1 N ASP A 859 O ASP A1035 SHEET 4 AA5 5 SER A1001 ASN A1005 -1 O ILE A1002 N LEU A 858 SHEET 5 AA5 5 VAL A 994 TYR A 996 -1 N TYR A 996 O MET A1003 SHEET 1 AA6 4 GLY A 849 TYR A 851 0 SHEET 2 AA6 4 ILE A1034 LYS A1047 -1 O LEU A1043 N TYR A 851 SHEET 3 AA6 4 LYS A1050 GLY A1060 -1 O LEU A1054 N LYS A1041 SHEET 4 AA6 4 LYS A1063 LYS A1071 -1 O GLU A1069 N ALA A1053 SHEET 1 AA7 3 ILE A1131 LYS A1133 0 SHEET 2 AA7 3 ILE A1171 GLN A1177 -1 O ILE A1171 N LYS A1133 SHEET 3 AA7 3 ALA A1188 TYR A1189 -1 O TYR A1189 N VAL A1174 SHEET 1 AA8 3 ILE A1131 LYS A1133 0 SHEET 2 AA8 3 ILE A1171 GLN A1177 -1 O ILE A1171 N LYS A1133 SHEET 3 AA8 3 SER A1201 ILE A1202 -1 O SER A1201 N GLN A1177 LINK O3' GTP D 1 P G D 2 1555 1555 1.60 LINK O3' G D 8 P DOC D 9 1555 1555 1.60 LINK OD1 ASP A 859 MG MG A1502 1555 1555 1.93 LINK O PHE A 860 MG MG A1502 1555 1555 2.24 LINK OD2 ASP A1000 MG MG A1502 1555 1555 2.10 LINK O1G DGT A1501 MG MG A1502 1555 1555 2.12 LINK O2B DGT A1501 MG MG A1502 1555 1555 2.17 LINK O1A DGT A1501 MG MG A1502 1555 1555 2.19 LINK SG CYS B 293 FE4 SF4 B 601 1555 1555 2.30 LINK SG CYS B 373 FE1 SF4 B 601 1555 1555 2.29 LINK SG CYS B 390 FE2 SF4 B 601 1555 1555 2.29 LINK SG CYS B 430 FE3 SF4 B 601 1555 1555 2.29 LINK O1G GTP D 1 MG MG D 101 1555 1555 2.10 LINK O2B GTP D 1 MG MG D 101 1555 1555 2.11 LINK O1A GTP D 1 MG MG D 101 1555 1555 2.08 CISPEP 1 GLN A 576 PRO A 577 0 1.87 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000