HEADER    TRANSPORT PROTEIN                       26-SEP-23   8WJH              
TITLE     CRYO-EM STRUCTURE OF OAT4                                             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: SOLUTE CARRIER FAMILY 22 MEMBER 11;                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: ORGANIC ANION TRANSPORTER 4,OAT4,ORGANIC ANION:DICARBOXYLATE
COMPND   5 EXCHANGER OAT4;                                                      
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: SLC22A11, OAT4;                                                
SOURCE   6 EXPRESSION_SYSTEM: HOMO SAPIENS;                                     
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 9606                                        
KEYWDS    SLC, TRANSPORT PROTEIN                                                
EXPDTA    ELECTRON MICROSCOPY                                                   
AUTHOR    H.W.QIAN,J.J.HE                                                       
REVDAT   2   04-SEP-24 8WJH    1       TITLE  REMARK                            
REVDAT   1   28-AUG-24 8WJH    0                                                
JRNL        AUTH   J.HE,G.LIU,F.KONG,Q.TAN,Z.WANG,M.YANG,Y.HE,X.JIA,C.YAN,      
JRNL        AUTH 2 C.WANG,H.QIAN                                                
JRNL        TITL   STRUCTURAL BASIS FOR THE TRANSPORT AND SUBSTRATE SELECTION   
JRNL        TITL 2 OF HUMAN URATE TRANSPORTER 1.                                
JRNL        REF    CELL REP                      V.  43 14628 2024              
JRNL        REFN                   ESSN 2211-1247                               
JRNL        PMID   39146184                                                     
JRNL        DOI    10.1016/J.CELREP.2024.114628                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION.    3.10 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   SOFTWARE PACKAGES      : NULL                                      
REMARK   3   RECONSTRUCTION SCHEMA  : NULL                                      
REMARK   3                                                                      
REMARK   3 EM MAP-MODEL FITTING AND REFINEMENT                                  
REMARK   3   PDB ENTRY                    : NULL                                
REMARK   3   REFINEMENT SPACE             : NULL                                
REMARK   3   REFINEMENT PROTOCOL          : NULL                                
REMARK   3   REFINEMENT TARGET            : NULL                                
REMARK   3   OVERALL ANISOTROPIC B VALUE  : NULL                                
REMARK   3                                                                      
REMARK   3 FITTING PROCEDURE : NULL                                             
REMARK   3                                                                      
REMARK   3 EM IMAGE RECONSTRUCTION STATISTICS                                   
REMARK   3   NOMINAL PIXEL SIZE (ANGSTROMS)    : NULL                           
REMARK   3   ACTUAL PIXEL SIZE  (ANGSTROMS)    : NULL                           
REMARK   3   EFFECTIVE RESOLUTION (ANGSTROMS)  : 3.100                          
REMARK   3   NUMBER OF PARTICLES               : 460072                         
REMARK   3   CTF CORRECTION METHOD             : NONE                           
REMARK   3                                                                      
REMARK   3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL                    
REMARK   3                                                                      
REMARK   3 OTHER DETAILS: NULL                                                  
REMARK   4                                                                      
REMARK   4 8WJH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 27-SEP-23.                  
REMARK 100 THE DEPOSITION ID IS D_1300041384.                                   
REMARK 245                                                                      
REMARK 245 EXPERIMENTAL DETAILS                                                 
REMARK 245   RECONSTRUCTION METHOD          : SINGLE PARTICLE                   
REMARK 245   SPECIMEN TYPE                  : NULL                              
REMARK 245                                                                      
REMARK 245 ELECTRON MICROSCOPE SAMPLE                                           
REMARK 245   SAMPLE TYPE                    : PARTICLE                          
REMARK 245   PARTICLE TYPE                  : POINT                             
REMARK 245   NAME OF SAMPLE                 : CRYO-EM STRUCTURE OF OAT4         
REMARK 245   SAMPLE CONCENTRATION (MG ML-1) : NULL                              
REMARK 245   SAMPLE SUPPORT DETAILS         : NULL                              
REMARK 245   SAMPLE VITRIFICATION DETAILS   : NULL                              
REMARK 245   SAMPLE BUFFER                  : NULL                              
REMARK 245   PH                             : 8.00                              
REMARK 245   SAMPLE DETAILS                 : NULL                              
REMARK 245                                                                      
REMARK 245 DATA ACQUISITION                                                     
REMARK 245   DATE OF EXPERIMENT                : NULL                           
REMARK 245   NUMBER OF MICROGRAPHS-IMAGES      : NULL                           
REMARK 245   TEMPERATURE (KELVIN)              : NULL                           
REMARK 245   MICROSCOPE MODEL                  : FEI TITAN KRIOS                
REMARK 245   DETECTOR TYPE                     : GATAN K3 BIOQUANTUM (6K X      
REMARK 245                                       4K)                            
REMARK 245   MINIMUM DEFOCUS (NM)              : 1500.00                        
REMARK 245   MAXIMUM DEFOCUS (NM)              : 1700.00                        
REMARK 245   MINIMUM TILT ANGLE (DEGREES)      : NULL                           
REMARK 245   MAXIMUM TILT ANGLE (DEGREES)      : NULL                           
REMARK 245   NOMINAL CS                        : NULL                           
REMARK 245   IMAGING MODE                      : BRIGHT FIELD                   
REMARK 245   ELECTRON DOSE (ELECTRONS NM**-2)  : 5000.00                        
REMARK 245   ILLUMINATION MODE                 : FLOOD BEAM                     
REMARK 245   NOMINAL MAGNIFICATION             : NULL                           
REMARK 245   CALIBRATED MAGNIFICATION          : NULL                           
REMARK 245   SOURCE                            : FIELD EMISSION GUN             
REMARK 245   ACCELERATION VOLTAGE (KV)         : 300                            
REMARK 245   IMAGING DETAILS                   : NULL                           
REMARK 247                                                                      
REMARK 247 ELECTRON MICROSCOPY                                                  
REMARK 247  THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON          
REMARK 247  MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE              
REMARK 247  THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES           
REMARK 247  ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION         
REMARK 247  OF THE STRUCTURE FACTORS.                                           
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     LYS A   306                                                      
REMARK 465     GLU A   307                                                      
REMARK 465     ALA A   308                                                      
REMARK 465     LYS A   309                                                      
REMARK 465     ASN A   310                                                      
REMARK 465     LEU A   311                                                      
REMARK 465     LYS A   328                                                      
REMARK 465     GLU A   329                                                      
REMARK 465     PRO A   330                                                      
REMARK 465     ARG A   331                                                      
REMARK 465     SER A   332                                                      
REMARK 465     VAL A   333                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     THR A  51    OG1  CG2                                            
REMARK 470     MET A  53    CG   SD   CE                                        
REMARK 470     LEU A  54    CG   CD1  CD2                                       
REMARK 470     ASP A  55    CG   OD1  OD2                                       
REMARK 470     ASN A  56    CG   OD1  ND2                                       
REMARK 470     SER A  58    OG                                                  
REMARK 470     VAL A  60    CG1  CG2                                            
REMARK 470     SER A  61    OG                                                  
REMARK 470     THR A  62    OG1  CG2                                            
REMARK 470     ASN A  63    CG   OD1  ND2                                       
REMARK 470     MET A  64    CG   SD   CE                                        
REMARK 470     THR A  65    OG1  CG2                                            
REMARK 470     PRO A  66    CG   CD                                             
REMARK 470     LYS A  67    CG   CD   CE   NZ                                   
REMARK 470     LEU A  69    CG   CD1  CD2                                       
REMARK 470     LEU A  70    CG   CD1  CD2                                       
REMARK 470     THR A  71    OG1  CG2                                            
REMARK 470     ILE A  72    CG1  CG2  CD1                                       
REMARK 470     SER A  73    OG                                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    CYS A  28   CA  -  CB  -  SG  ANGL. DEV. =   8.3 DEGREES          
REMARK 500    CYS A 136   CB  -  CA  -  C   ANGL. DEV. =  13.3 DEGREES          
REMARK 500    LEU A 296   CA  -  CB  -  CG  ANGL. DEV. =  14.3 DEGREES          
REMARK 500    ASP A 385   CB  -  CG  -  OD1 ANGL. DEV. =   5.4 DEGREES          
REMARK 500    LEU A 509   CA  -  CB  -  CG  ANGL. DEV. =  14.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    THR A  62       -7.25    -56.64                                   
REMARK 500    ALA A 102       -4.61    -57.20                                   
REMARK 500    LEU A 134       46.83    -84.99                                   
REMARK 500    CYS A 136      -51.82     70.98                                   
REMARK 500    ARG A 253       -2.85     60.43                                   
REMARK 500    LYS A 288       60.59   -114.31                                   
REMARK 500    GLU A 314      -41.80     72.11                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: EMD-37580   RELATED DB: EMDB                             
REMARK 900 CRYO-EM STRUCTURE OF OAT4                                            
DBREF  8WJH A    1   517  UNP    Q9NSA0   S22AB_HUMAN      1    517             
SEQRES   1 A  517  MET ALA PHE SER LYS LEU LEU GLU GLN ALA GLY GLY VAL          
SEQRES   2 A  517  GLY LEU PHE GLN THR LEU GLN VAL LEU THR PHE ILE LEU          
SEQRES   3 A  517  PRO CYS LEU MET ILE PRO SER GLN MET LEU LEU GLU ASN          
SEQRES   4 A  517  PHE SER ALA ALA ILE PRO GLY HIS ARG CYS TRP THR HIS          
SEQRES   5 A  517  MET LEU ASP ASN GLY SER ALA VAL SER THR ASN MET THR          
SEQRES   6 A  517  PRO LYS ALA LEU LEU THR ILE SER ILE PRO PRO GLY PRO          
SEQRES   7 A  517  ASN GLN GLY PRO HIS GLN CYS ARG ARG PHE ARG GLN PRO          
SEQRES   8 A  517  GLN TRP GLN LEU LEU ASP PRO ASN ALA THR ALA THR SER          
SEQRES   9 A  517  TRP SER GLU ALA ASP THR GLU PRO CYS VAL ASP GLY TRP          
SEQRES  10 A  517  VAL TYR ASP ARG SER VAL PHE THR SER THR ILE VAL ALA          
SEQRES  11 A  517  LYS TRP ASP LEU VAL CYS SER SER GLN GLY LEU LYS PRO          
SEQRES  12 A  517  LEU SER GLN SER ILE PHE MET SER GLY ILE LEU VAL GLY          
SEQRES  13 A  517  SER PHE ILE TRP GLY LEU LEU SER TYR ARG PHE GLY ARG          
SEQRES  14 A  517  LYS PRO MET LEU SER TRP CYS CYS LEU GLN LEU ALA VAL          
SEQRES  15 A  517  ALA GLY THR SER THR ILE PHE ALA PRO THR PHE VAL ILE          
SEQRES  16 A  517  TYR CYS GLY LEU ARG PHE VAL ALA ALA PHE GLY MET ALA          
SEQRES  17 A  517  GLY ILE PHE LEU SER SER LEU THR LEU MET VAL GLU TRP          
SEQRES  18 A  517  THR THR THR SER ARG ARG ALA VAL THR MET THR VAL VAL          
SEQRES  19 A  517  GLY CYS ALA PHE SER ALA GLY GLN ALA ALA LEU GLY GLY          
SEQRES  20 A  517  LEU ALA PHE ALA LEU ARG ASP TRP ARG THR LEU GLN LEU          
SEQRES  21 A  517  ALA ALA SER VAL PRO PHE PHE ALA ILE SER LEU ILE SER          
SEQRES  22 A  517  TRP TRP LEU PRO GLU SER ALA ARG TRP LEU ILE ILE LYS          
SEQRES  23 A  517  GLY LYS PRO ASP GLN ALA LEU GLN GLU LEU ARG LYS VAL          
SEQRES  24 A  517  ALA ARG ILE ASN GLY HIS LYS GLU ALA LYS ASN LEU THR          
SEQRES  25 A  517  ILE GLU VAL LEU MET SER SER VAL LYS GLU GLU VAL ALA          
SEQRES  26 A  517  SER ALA LYS GLU PRO ARG SER VAL LEU ASP LEU PHE CYS          
SEQRES  27 A  517  VAL PRO VAL LEU ARG TRP ARG SER CYS ALA MET LEU VAL          
SEQRES  28 A  517  VAL ASN PHE SER LEU LEU ILE SER TYR TYR GLY LEU VAL          
SEQRES  29 A  517  PHE ASP LEU GLN SER LEU GLY ARG ASP ILE PHE LEU LEU          
SEQRES  30 A  517  GLN ALA LEU PHE GLY ALA VAL ASP PHE LEU GLY ARG ALA          
SEQRES  31 A  517  THR THR ALA LEU LEU LEU SER PHE LEU GLY ARG ARG THR          
SEQRES  32 A  517  ILE GLN ALA GLY SER GLN ALA MET ALA GLY LEU ALA ILE          
SEQRES  33 A  517  LEU ALA ASN MET LEU VAL PRO GLN ASP LEU GLN THR LEU          
SEQRES  34 A  517  ARG VAL VAL PHE ALA VAL LEU GLY LYS GLY CYS PHE GLY          
SEQRES  35 A  517  ILE SER LEU THR CYS LEU THR ILE TYR LYS ALA GLU LEU          
SEQRES  36 A  517  PHE PRO THR PRO VAL ARG MET THR ALA ASP GLY ILE LEU          
SEQRES  37 A  517  HIS THR VAL GLY ARG LEU GLY ALA MET MET GLY PRO LEU          
SEQRES  38 A  517  ILE LEU MET SER ARG GLN ALA LEU PRO LEU LEU PRO PRO          
SEQRES  39 A  517  LEU LEU TYR GLY VAL ILE SER ILE ALA SER SER LEU VAL          
SEQRES  40 A  517  VAL LEU PHE PHE LEU PRO GLU THR GLN GLY                      
HET     CL  A 601       1                                                       
HETNAM      CL CHLORIDE ION                                                     
FORMUL   2   CL    CL 1-                                                        
HELIX    1 AA1 MET A    1  ALA A   10  1                                  10    
HELIX    2 AA2 GLY A   14  LEU A   36  1                                  23    
HELIX    3 AA3 LEU A   37  ALA A   42  1                                   6    
HELIX    4 AA4 THR A   51  ASN A   56  1                                   6    
HELIX    5 AA5 THR A   65  ILE A   74  1                                  10    
HELIX    6 AA6 GLN A   92  LEU A   96  5                                   5    
HELIX    7 AA7 SER A  106  ALA A  108  5                                   3    
HELIX    8 AA8 THR A  127  ASP A  133  1                                   7    
HELIX    9 AA9 GLY A  140  SER A  164  1                                  25    
HELIX   10 AB1 GLY A  168  THR A  187  1                                  20    
HELIX   11 AB2 ILE A  188  ALA A  190  5                                   3    
HELIX   12 AB3 THR A  192  THR A  222  1                                  31    
HELIX   13 AB4 THR A  223  ARG A  253  1                                  31    
HELIX   14 AB5 ASP A  254  LEU A  276  1                                  23    
HELIX   15 AB6 SER A  279  LYS A  286  1                                   8    
HELIX   16 AB7 LYS A  288  ASN A  303  1                                  16    
HELIX   17 AB8 GLU A  314  VAL A  320  1                                   7    
HELIX   18 AB9 VAL A  320  ALA A  327  1                                   8    
HELIX   19 AC1 ASP A  335  VAL A  339  1                                   5    
HELIX   20 AC2 VAL A  339  ASP A  366  1                                  28    
HELIX   21 AC3 ASP A  366  GLY A  371  1                                   6    
HELIX   22 AC4 ASP A  373  LEU A  399  1                                  27    
HELIX   23 AC5 GLY A  400  VAL A  422  1                                  23    
HELIX   24 AC6 LEU A  426  PHE A  456  1                                  31    
HELIX   25 AC7 PRO A  457  MET A  484  1                                  28    
HELIX   26 AC8 SER A  485  ALA A  488  5                                   4    
HELIX   27 AC9 LEU A  491  LEU A  512  1                                  22    
SHEET    1 AA1 2 HIS A  47  CYS A  49  0                                        
SHEET    2 AA1 2 TRP A 117  TYR A 119 -1  O  VAL A 118   N  ARG A  48           
SHEET    1 AA2 2 ARG A  86  PHE A  88  0                                        
SHEET    2 AA2 2 THR A 110  PRO A 112 -1  O  GLU A 111   N  ARG A  87           
SSBOND   1 CYS A   49    CYS A  113                          1555   1555  2.04  
SSBOND   2 CYS A   85    CYS A  136                          1555   1555  2.03  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1                      
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000