HEADER DNA BINDING PROTEIN 08-APR-04 1T0F TITLE CRYSTAL STRUCTURE OF THE TNSA/TNSC(504-555) COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPOSON TN7 TRANSPOSITION PROTEIN TNSA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TRANSPOSON TN7 TRANSPOSITION PROTEIN TNSC; COMPND 7 CHAIN: C, D; COMPND 8 FRAGMENT: RESIDUES 504-555; COMPND 9 SYNONYM: PROTEIN E; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TNSA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 562; SOURCE 13 GENE: TNSC; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET32 KEYWDS PROTEIN-PROTEIN COMPLEX, MIXED ALPHA-BETA, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.R.RONNING,Y.LI,Z.N.PEREZ,P.D.ROSS,A.B.HICKMAN,N.L.CRAIG,F.DYDA REVDAT 5 20-DEC-17 1T0F 1 JRNL REVDAT 4 29-APR-15 1T0F 1 HETSYN REVDAT 3 10-SEP-14 1T0F 1 JRNL REMARK VERSN REVDAT 2 24-FEB-09 1T0F 1 VERSN REVDAT 1 09-NOV-04 1T0F 0 JRNL AUTH D.R.RONNING,Y.LI,Z.N.PEREZ,P.D.ROSS,A.B.HICKMAN,N.L.CRAIG, JRNL AUTH 2 F.DYDA JRNL TITL THE CARBOXY-TERMINAL PORTION OF TNSC ACTIVATES THE TN7 JRNL TITL 2 TRANSPOSASE THROUGH A SPECIFIC INTERACTION WITH TNSA. JRNL REF EMBO J. V. 23 2972 2004 JRNL REFN ISSN 0261-4189 JRNL PMID 15257292 JRNL DOI 10.1038/SJ.EMBOJ.7600311 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.B.HICKMAN,Y.LI,S.V.MATHEW,E.W.MAY,N.L.CRAIG,F.DYDA REMARK 1 TITL UNEXPECTED STRUCTURAL DIVERSITY IN DNA RECOMBINATION: THE REMARK 1 TITL 2 RESTRICTION ENDONUCLEASE CONNECTION. REMARK 1 REF MOL.CELL V. 5 1025 2000 REMARK 1 REFN ISSN 1097-2765 REMARK 1 PMID 10911996 REMARK 1 DOI 10.1016/S1097-2765(00)80267-1 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 494976.550 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 66363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3409 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9692 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 524 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5041 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 355 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.50000 REMARK 3 B22 (A**2) : -4.09000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.78000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.680 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.430 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.230 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.200 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.440 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 43.99 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : MLA.PAR REMARK 3 PARAMETER FILE 5 : MPD.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : MLA.TOP REMARK 3 TOPOLOGY FILE 5 : MPD.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1T0F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-04. REMARK 100 THE DEPOSITION ID IS D_1000022156. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(220) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66363 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 0.07800 REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38600 REMARK 200 R SYM FOR SHELL (I) : 0.38600 REMARK 200 FOR SHELL : 2.370 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1F1Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MALONATE, LITHIUM SULFATE, 2,4 REMARK 280 METHYLPENTANEDIOL, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 78.01600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.05600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 78.01600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.05600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -131.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 ALA A 4 REMARK 465 ARG A 269 REMARK 465 TYR A 270 REMARK 465 VAL A 271 REMARK 465 ALA A 272 REMARK 465 ASN A 273 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 ALA B 4 REMARK 465 ASN B 5 REMARK 465 SER B 6 REMARK 465 ARG B 269 REMARK 465 TYR B 270 REMARK 465 VAL B 271 REMARK 465 ALA B 272 REMARK 465 ASN B 273 REMARK 465 GLY C 502 REMARK 465 SER C 503 REMARK 465 ALA C 504 REMARK 465 ALA C 554 REMARK 465 GLY C 555 REMARK 465 GLY D 502 REMARK 465 SER D 503 REMARK 465 ALA D 504 REMARK 465 ILE D 505 REMARK 465 GLN D 553 REMARK 465 ALA D 554 REMARK 465 GLY D 555 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 40 -9.45 -57.26 REMARK 500 ASP A 121 -164.95 -160.71 REMARK 500 MET A 265 15.59 -60.94 REMARK 500 GLU A 267 -80.82 -78.83 REMARK 500 LYS B 205 32.12 -99.52 REMARK 500 PHE D 551 57.25 -97.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1010 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 114 OD2 REMARK 620 2 GLN A 130 OE1 80.4 REMARK 620 3 VAL A 131 O 87.8 98.8 REMARK 620 4 HOH A2120 O 95.9 161.1 99.5 REMARK 620 5 HOH A2211 O 175.2 97.9 97.0 84.2 REMARK 620 6 HOH A2216 O 90.3 85.9 174.5 75.6 85.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1009 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 130 OE1 REMARK 620 2 HOH B2030 O 92.6 REMARK 620 3 HOH B2178 O 161.9 87.8 REMARK 620 4 ASP B 114 OD2 84.2 173.3 93.4 REMARK 620 5 VAL B 131 O 98.8 95.1 99.2 91.2 REMARK 620 6 HOH B2223 O 84.5 79.5 77.8 94.3 173.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA D 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1008 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1F1Z RELATED DB: PDB REMARK 900 TNSA, A CATALYTIC COMPONENT OF THE TN7 TRANSPOSITION SYSTEM DBREF 1T0F A 1 273 UNP P13988 TNSA_ECOLI 1 273 DBREF 1T0F B 1 273 UNP P13988 TNSA_ECOLI 1 273 DBREF 1T0F C 503 555 UNP P05846 TNSC_ECOLI 503 555 DBREF 1T0F D 503 555 UNP P05846 TNSC_ECOLI 503 555 SEQADV 1T0F GLY A -2 UNP P13988 CLONING ARTIFACT SEQADV 1T0F SER A -1 UNP P13988 CLONING ARTIFACT SEQADV 1T0F ALA A 0 UNP P13988 CLONING ARTIFACT SEQADV 1T0F GLY B -2 UNP P13988 CLONING ARTIFACT SEQADV 1T0F SER B -1 UNP P13988 CLONING ARTIFACT SEQADV 1T0F ALA B 0 UNP P13988 CLONING ARTIFACT SEQADV 1T0F GLY C 502 UNP P05846 CLONING ARTIFACT SEQADV 1T0F GLY D 502 UNP P05846 CLONING ARTIFACT SEQRES 1 A 276 GLY SER ALA MET ALA LYS ALA ASN SER SER PHE SER GLU SEQRES 2 A 276 VAL GLN ILE ALA ARG ARG ILE LYS GLU GLY ARG GLY GLN SEQRES 3 A 276 GLY HIS GLY LYS ASP TYR ILE PRO TRP LEU THR VAL GLN SEQRES 4 A 276 GLU VAL PRO SER SER GLY ARG SER HIS ARG ILE TYR SER SEQRES 5 A 276 HIS LYS THR GLY ARG VAL HIS HIS LEU LEU SER ASP LEU SEQRES 6 A 276 GLU LEU ALA VAL PHE LEU SER LEU GLU TRP GLU SER SER SEQRES 7 A 276 VAL LEU ASP ILE ARG GLU GLN PHE PRO LEU LEU PRO SER SEQRES 8 A 276 ASP THR ARG GLN ILE ALA ILE ASP SER GLY ILE LYS HIS SEQRES 9 A 276 PRO VAL ILE ARG GLY VAL ASP GLN VAL MET SER THR ASP SEQRES 10 A 276 PHE LEU VAL ASP CYS LYS ASP GLY PRO PHE GLU GLN PHE SEQRES 11 A 276 ALA ILE GLN VAL LYS PRO ALA ALA ALA LEU GLN ASP GLU SEQRES 12 A 276 ARG THR LEU GLU LYS LEU GLU LEU GLU ARG ARG TYR TRP SEQRES 13 A 276 GLN GLN LYS GLN ILE PRO TRP PHE ILE PHE THR ASP LYS SEQRES 14 A 276 GLU ILE ASN PRO VAL VAL LYS GLU ASN ILE GLU TRP LEU SEQRES 15 A 276 TYR SER VAL LYS THR GLU GLU VAL SER ALA GLU LEU LEU SEQRES 16 A 276 ALA GLN LEU SER PRO LEU ALA HIS ILE LEU GLN GLU LYS SEQRES 17 A 276 GLY ASP GLU ASN ILE ILE ASN VAL CYS LYS GLN VAL ASP SEQRES 18 A 276 ILE ALA TYR ASP LEU GLU LEU GLY LYS THR LEU SER GLU SEQRES 19 A 276 ILE ARG ALA LEU THR ALA ASN GLY PHE ILE LYS PHE ASN SEQRES 20 A 276 ILE TYR LYS SER PHE ARG ALA ASN LYS CYS ALA ASP LEU SEQRES 21 A 276 CYS ILE SER GLN VAL VAL ASN MET GLU GLU LEU ARG TYR SEQRES 22 A 276 VAL ALA ASN SEQRES 1 B 276 GLY SER ALA MET ALA LYS ALA ASN SER SER PHE SER GLU SEQRES 2 B 276 VAL GLN ILE ALA ARG ARG ILE LYS GLU GLY ARG GLY GLN SEQRES 3 B 276 GLY HIS GLY LYS ASP TYR ILE PRO TRP LEU THR VAL GLN SEQRES 4 B 276 GLU VAL PRO SER SER GLY ARG SER HIS ARG ILE TYR SER SEQRES 5 B 276 HIS LYS THR GLY ARG VAL HIS HIS LEU LEU SER ASP LEU SEQRES 6 B 276 GLU LEU ALA VAL PHE LEU SER LEU GLU TRP GLU SER SER SEQRES 7 B 276 VAL LEU ASP ILE ARG GLU GLN PHE PRO LEU LEU PRO SER SEQRES 8 B 276 ASP THR ARG GLN ILE ALA ILE ASP SER GLY ILE LYS HIS SEQRES 9 B 276 PRO VAL ILE ARG GLY VAL ASP GLN VAL MET SER THR ASP SEQRES 10 B 276 PHE LEU VAL ASP CYS LYS ASP GLY PRO PHE GLU GLN PHE SEQRES 11 B 276 ALA ILE GLN VAL LYS PRO ALA ALA ALA LEU GLN ASP GLU SEQRES 12 B 276 ARG THR LEU GLU LYS LEU GLU LEU GLU ARG ARG TYR TRP SEQRES 13 B 276 GLN GLN LYS GLN ILE PRO TRP PHE ILE PHE THR ASP LYS SEQRES 14 B 276 GLU ILE ASN PRO VAL VAL LYS GLU ASN ILE GLU TRP LEU SEQRES 15 B 276 TYR SER VAL LYS THR GLU GLU VAL SER ALA GLU LEU LEU SEQRES 16 B 276 ALA GLN LEU SER PRO LEU ALA HIS ILE LEU GLN GLU LYS SEQRES 17 B 276 GLY ASP GLU ASN ILE ILE ASN VAL CYS LYS GLN VAL ASP SEQRES 18 B 276 ILE ALA TYR ASP LEU GLU LEU GLY LYS THR LEU SER GLU SEQRES 19 B 276 ILE ARG ALA LEU THR ALA ASN GLY PHE ILE LYS PHE ASN SEQRES 20 B 276 ILE TYR LYS SER PHE ARG ALA ASN LYS CYS ALA ASP LEU SEQRES 21 B 276 CYS ILE SER GLN VAL VAL ASN MET GLU GLU LEU ARG TYR SEQRES 22 B 276 VAL ALA ASN SEQRES 1 C 54 GLY SER ALA ILE LYS VAL VAL LYS PRO SER ASP TRP ASP SEQRES 2 C 54 SER LEU PRO ASP THR ASP LEU ARG TYR ILE TYR SER GLN SEQRES 3 C 54 ARG GLN PRO GLU LYS THR MET HIS GLU ARG LEU LYS GLY SEQRES 4 C 54 LYS GLY VAL ILE VAL ASP MET ALA SER LEU PHE LYS GLN SEQRES 5 C 54 ALA GLY SEQRES 1 D 54 GLY SER ALA ILE LYS VAL VAL LYS PRO SER ASP TRP ASP SEQRES 2 D 54 SER LEU PRO ASP THR ASP LEU ARG TYR ILE TYR SER GLN SEQRES 3 D 54 ARG GLN PRO GLU LYS THR MET HIS GLU ARG LEU LYS GLY SEQRES 4 D 54 LYS GLY VAL ILE VAL ASP MET ALA SER LEU PHE LYS GLN SEQRES 5 D 54 ALA GLY HET MG A1010 1 HET MLA A1001 7 HET MPD A1004 8 HET MPD A1006 8 HET MPD A1008 8 HET MG B1009 1 HET MLA B1003 7 HET MPD B1005 8 HET MPD B1007 8 HET MLA D1002 7 HETNAM MG MAGNESIUM ION HETNAM MLA MALONIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 5 MG 2(MG 2+) FORMUL 6 MLA 3(C3 H4 O4) FORMUL 7 MPD 5(C6 H14 O2) FORMUL 15 HOH *355(H2 O) HELIX 1 1 SER A 9 GLU A 19 1 11 HELIX 2 2 HIS A 25 TYR A 29 5 5 HELIX 3 3 THR A 34 VAL A 38 5 5 HELIX 4 4 SER A 60 GLU A 73 1 14 HELIX 5 5 LEU A 86 GLY A 98 1 13 HELIX 6 6 PRO A 133 GLN A 138 5 6 HELIX 7 7 ASP A 139 GLN A 157 1 19 HELIX 8 8 THR A 164 ILE A 168 5 5 HELIX 9 9 ASN A 169 SER A 181 1 13 HELIX 10 10 SER A 188 ALA A 193 1 6 HELIX 11 11 GLN A 194 LYS A 205 1 12 HELIX 12 12 ASN A 209 TYR A 221 1 13 HELIX 13 13 GLY A 226 ASN A 238 1 13 HELIX 14 14 SER A 248 ASN A 252 5 5 HELIX 15 15 LYS A 253 LEU A 257 5 5 HELIX 16 16 SER B 9 GLU B 19 1 11 HELIX 17 17 HIS B 25 TYR B 29 5 5 HELIX 18 18 THR B 34 VAL B 38 5 5 HELIX 19 19 SER B 60 GLU B 73 1 14 HELIX 20 20 LEU B 86 GLY B 98 1 13 HELIX 21 21 PRO B 133 GLN B 138 5 6 HELIX 22 22 ASP B 139 LYS B 156 1 18 HELIX 23 23 THR B 164 ILE B 168 5 5 HELIX 24 24 ASN B 169 TYR B 180 1 12 HELIX 25 25 SER B 188 ALA B 193 1 6 HELIX 26 26 GLN B 194 LYS B 205 1 12 HELIX 27 27 ASN B 209 TYR B 221 1 13 HELIX 28 28 GLY B 226 ASN B 238 1 13 HELIX 29 29 SER B 248 ASN B 252 5 5 HELIX 30 30 LYS B 253 LEU B 257 5 5 HELIX 31 31 ASN B 264 LEU B 268 5 5 HELIX 32 32 LYS C 509 LEU C 516 5 8 HELIX 33 33 ASP C 520 GLN C 527 1 8 HELIX 34 34 THR C 533 LYS C 541 1 9 HELIX 35 35 ASP C 546 PHE C 551 1 6 HELIX 36 36 LYS D 509 LEU D 516 5 8 HELIX 37 37 ASP D 520 GLN D 527 1 8 HELIX 38 38 THR D 533 LYS D 541 1 9 HELIX 39 39 ASP D 546 PHE D 551 1 6 SHEET 1 A 2 HIS A 45 TYR A 48 0 SHEET 2 A 2 VAL A 55 LEU A 58 -1 O HIS A 56 N ILE A 47 SHEET 1 B 4 VAL A 76 PRO A 84 0 SHEET 2 B 4 SER A 112 CYS A 119 -1 O ASP A 118 N LEU A 77 SHEET 3 B 4 GLN A 126 VAL A 131 -1 O PHE A 127 N VAL A 117 SHEET 4 B 4 TRP A 160 PHE A 163 1 O PHE A 163 N GLN A 130 SHEET 1 C 2 VAL A 103 ILE A 104 0 SHEET 2 C 2 VAL A 107 ASP A 108 -1 O VAL A 107 N ILE A 104 SHEET 1 D 2 ILE A 241 LYS A 242 0 SHEET 2 D 2 CYS A 258 ILE A 259 -1 O CYS A 258 N LYS A 242 SHEET 1 E 2 VAL A 262 ASN A 264 0 SHEET 2 E 2 GLN B 261 VAL B 263 1 O GLN B 261 N VAL A 263 SHEET 1 F 2 HIS B 45 TYR B 48 0 SHEET 2 F 2 VAL B 55 LEU B 58 -1 O HIS B 56 N ILE B 47 SHEET 1 G 4 VAL B 76 PRO B 84 0 SHEET 2 G 4 SER B 112 CYS B 119 -1 O ASP B 118 N LEU B 77 SHEET 3 G 4 GLN B 126 VAL B 131 -1 O PHE B 127 N VAL B 117 SHEET 4 G 4 TRP B 160 PHE B 163 1 O PHE B 161 N ALA B 128 SHEET 1 H 2 VAL B 103 ILE B 104 0 SHEET 2 H 2 VAL B 107 ASP B 108 -1 O VAL B 107 N ILE B 104 SHEET 1 I 2 ILE B 241 LYS B 242 0 SHEET 2 I 2 CYS B 258 ILE B 259 -1 O CYS B 258 N LYS B 242 LINK MG MG A1010 OD2 ASP A 114 1555 1555 2.40 LINK MG MG A1010 OE1 GLN A 130 1555 1555 2.47 LINK MG MG A1010 O VAL A 131 1555 1555 2.37 LINK MG MG A1010 O HOH A2120 1555 1555 2.56 LINK MG MG A1010 O HOH A2211 1555 1555 2.44 LINK MG MG A1010 O HOH A2216 1555 1555 2.69 LINK MG MG B1009 OE1 GLN B 130 1555 1555 2.47 LINK MG MG B1009 O HOH B2030 1555 1555 2.48 LINK MG MG B1009 O HOH B2178 1555 1555 2.63 LINK MG MG B1009 OD2 ASP B 114 1555 1555 2.41 LINK MG MG B1009 O VAL B 131 1555 1555 2.35 LINK MG MG B1009 O HOH B2223 1555 1555 2.69 SITE 1 AC1 6 ASP B 114 GLN B 130 VAL B 131 HOH B2030 SITE 2 AC1 6 HOH B2178 HOH B2223 SITE 1 AC2 6 ASP A 114 GLN A 130 VAL A 131 HOH A2120 SITE 2 AC2 6 HOH A2211 HOH A2216 SITE 1 AC3 8 PRO A 102 VAL A 103 ILE A 104 ARG A 141 SITE 2 AC3 8 LYS A 145 HOH A2269 HOH A2344 ARG B 105 SITE 1 AC4 6 VAL A 182 HOH A2318 GLN B 138 TYR D 525 SITE 2 AC4 6 ARG D 528 HOH D2153 SITE 1 AC5 8 ARG A 105 PRO B 102 VAL B 103 ILE B 104 SITE 2 AC5 8 ARG B 141 LYS B 145 HOH B2019 HOH B2061 SITE 1 AC6 4 ASP A 61 ILE A 168 LYS A 173 GLU A 177 SITE 1 AC7 7 ARG B 21 GLY B 22 GLN B 23 PRO B 84 SITE 2 AC7 7 LEU B 86 PRO B 87 VAL B 110 SITE 1 AC8 5 GLN A 194 PRO A 197 TYR A 221 HOH A2111 SITE 2 AC8 5 HOH A2288 SITE 1 AC9 1 GLN B 194 SITE 1 BC1 5 ARG A 21 GLN A 23 PRO A 84 LEU A 86 SITE 2 BC1 5 PRO A 87 CRYST1 156.032 70.112 89.681 90.00 123.61 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006409 0.000000 0.004260 0.00000 SCALE2 0.000000 0.014263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013389 0.00000