HEADER METAL BINDING PROTEIN 25-OCT-07 2JWW TITLE CALCIUM-FREE RAT ALPHA-PARVALBUMIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PARVALBUMIN ALPHA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 GENE: PVALB, PVA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR: PBLUESCRIPT KEYWDS ALPHA-PARVALBUMIN, EF-HAND PROTEIN, CALCIUM-FREE, ACETYLATION, MUSCLE KEYWDS 2 PROTEIN, PHOSPHORYLATION, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.T.HENZL,J.J.TANNER REVDAT 4 29-MAY-24 2JWW 1 REMARK REVDAT 3 16-MAR-22 2JWW 1 REMARK REVDAT 2 24-FEB-09 2JWW 1 VERSN REVDAT 1 12-AUG-08 2JWW 0 JRNL AUTH M.T.HENZL,J.J.TANNER JRNL TITL SOLUTION STRUCTURE OF CA2+-FREE RAT ALPHA-PARVALBUMIN JRNL REF PROTEIN SCI. V. 17 431 2008 JRNL REFN ISSN 0961-8368 JRNL PMID 18218708 JRNL DOI 10.1110/PS.073318308 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, ARIA REMARK 3 AUTHORS : DELAGLIO, F. ET AL. (NMRPIPE), LINGE, J.P. ET AL. REMARK 3 (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JWW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000100392. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 170 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 150 MM SODIUM CHLORIDE, 10 MM REMARK 210 MES, 5 MM EDTA, 0.1 % SODIUM REMARK 210 AZIDE, 3 MM [U-98% 15N] PROTEIN, REMARK 210 90% H2O/10% D2O; 150 MM SODIUM REMARK 210 CHLORIDE, 10 MM MES, 5 MM EDTA, REMARK 210 0.1 % SODIUM AZIDE, 3 MM [U-98% REMARK 210 13C; U-98% 15N] PROTEIN, 90% H2O/ REMARK 210 10% D2O; 150 MM SODIUM CHLORIDE, REMARK 210 10 MM MES, 5 MM EDTA, 0.1 % REMARK 210 SODIUM AZIDE, 3 MM [U-15% 13C; U- REMARK 210 98% 15N] PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D HN(CO)CA; 3D REMARK 210 H(CCO)NH; 3D HCCH-TOCSY; 1H-15N REMARK 210 NOESY-HSQC; 1H-13C NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, VNMR REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 90 H GLY A 93 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 5 -64.78 -107.84 REMARK 500 1 ASP A 51 49.60 -87.20 REMARK 500 1 GLU A 60 -34.04 -33.77 REMARK 500 1 LYS A 68 -15.34 -49.71 REMARK 500 1 ALA A 74 -161.13 -110.60 REMARK 500 1 ASP A 90 39.44 -82.41 REMARK 500 1 LYS A 91 -36.54 -28.75 REMARK 500 1 GLU A 108 -79.68 -58.60 REMARK 500 2 LYS A 38 -144.41 -101.32 REMARK 500 2 ASP A 51 44.31 -95.25 REMARK 500 2 SER A 55 34.92 77.64 REMARK 500 2 GLU A 60 -32.47 -34.46 REMARK 500 2 ALA A 74 -158.88 -171.69 REMARK 500 2 ASP A 76 -163.39 -119.55 REMARK 500 2 SER A 78 -169.95 -105.85 REMARK 500 2 ASP A 90 38.63 -96.32 REMARK 500 2 LYS A 91 -29.90 -31.56 REMARK 500 3 LEU A 5 -70.18 -100.25 REMARK 500 3 SER A 7 109.32 -58.35 REMARK 500 3 ASP A 25 92.74 -170.35 REMARK 500 3 GLU A 60 -32.71 -34.92 REMARK 500 3 SER A 71 2.96 -67.63 REMARK 500 3 ALA A 74 -166.97 -108.33 REMARK 500 3 ASP A 90 38.79 -95.01 REMARK 500 3 LYS A 91 -36.21 -28.32 REMARK 500 4 LEU A 5 -70.77 -108.21 REMARK 500 4 SER A 39 173.85 -55.10 REMARK 500 4 ASP A 51 52.72 -106.42 REMARK 500 4 SER A 55 15.06 82.83 REMARK 500 4 GLU A 60 -30.96 -38.13 REMARK 500 4 LYS A 68 -8.30 -59.51 REMARK 500 4 ALA A 74 -79.74 -150.47 REMARK 500 4 ARG A 75 -158.59 -170.18 REMARK 500 4 SER A 78 -173.72 -69.99 REMARK 500 4 ASP A 90 38.30 -89.79 REMARK 500 4 LYS A 91 -34.50 -30.05 REMARK 500 4 GLU A 108 -72.11 -64.96 REMARK 500 5 MET A 2 63.82 -67.36 REMARK 500 5 ASP A 25 95.73 -164.03 REMARK 500 5 LYS A 37 -35.54 -38.62 REMARK 500 5 LYS A 38 -99.32 -121.31 REMARK 500 5 SER A 55 17.34 57.39 REMARK 500 5 ALA A 74 -152.61 -91.73 REMARK 500 5 ARG A 75 -91.25 -91.99 REMARK 500 5 ASP A 76 139.88 168.50 REMARK 500 5 LEU A 77 92.57 -46.95 REMARK 500 5 ASP A 90 38.05 -95.59 REMARK 500 5 LYS A 91 -35.81 -29.10 REMARK 500 5 GLU A 108 -71.01 -49.87 REMARK 500 6 LEU A 5 -64.36 -101.00 REMARK 500 REMARK 500 THIS ENTRY HAS 200 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2JWW A 1 109 UNP P02625 PRVA_RAT 2 110 SEQRES 1 A 109 SER MET THR ASP LEU LEU SER ALA GLU ASP ILE LYS LYS SEQRES 2 A 109 ALA ILE GLY ALA PHE THR ALA ALA ASP SER PHE ASP HIS SEQRES 3 A 109 LYS LYS PHE PHE GLN MET VAL GLY LEU LYS LYS LYS SER SEQRES 4 A 109 ALA ASP ASP VAL LYS LYS VAL PHE HIS ILE LEU ASP LYS SEQRES 5 A 109 ASP LYS SER GLY PHE ILE GLU GLU ASP GLU LEU GLY SER SEQRES 6 A 109 ILE LEU LYS GLY PHE SER SER ASP ALA ARG ASP LEU SER SEQRES 7 A 109 ALA LYS GLU THR LYS THR LEU MET ALA ALA GLY ASP LYS SEQRES 8 A 109 ASP GLY ASP GLY LYS ILE GLY VAL GLU GLU PHE SER THR SEQRES 9 A 109 LEU VAL ALA GLU SER HELIX 1 1 SER A 7 PHE A 18 1 12 HELIX 2 2 ALA A 20 ASP A 25 1 6 HELIX 3 3 ASP A 25 VAL A 33 1 9 HELIX 4 4 SER A 39 ASP A 51 1 13 HELIX 5 5 GLU A 62 LEU A 67 1 6 HELIX 6 6 LEU A 67 SER A 72 1 6 HELIX 7 7 SER A 78 ASP A 90 1 13 HELIX 8 8 GLU A 100 SER A 109 1 10 SHEET 1 A 2 PHE A 57 GLU A 59 0 SHEET 2 A 2 LYS A 96 GLY A 98 -1 O ILE A 97 N ILE A 58 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20