HEADER TRANSFERASE 24-JUN-21 7R70 TITLE CRYSTAL STRUCTURE OF THE UBARK2C FUSION PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN,E3 UBIQUITIN-PROTEIN LIGASE RNF165; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ARK2C FUSED TO UBIQUITIN; COMPND 5 EC: 2.3.2.27; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: GPLGS REMAINED AFTER THE TAG REMOVAL, FOLLOWED BY A COMPND 8 UBIQUITIN FUSED TO ARK2C DN254 CONNECTED VIA A 10 AMINO ACID LINKER COMPND 9 GESGSGGSGS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBC, RNF165; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS RING E3 LIGASE UBIQUITIN PTM, LIGASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.PALUDA,A.J.MIDDLETON,P.D.MACE,C.L.DAY REVDAT 3 18-OCT-23 7R70 1 REMARK REVDAT 2 17-AUG-22 7R70 1 JRNL REVDAT 1 09-MAR-22 7R70 0 JRNL AUTH A.PALUDA,A.J.MIDDLETON,C.ROSSIG,P.D.MACE,C.L.DAY JRNL TITL UBIQUITIN AND A CHARGED LOOP REGULATE THE UBIQUITIN E3 JRNL TITL 2 LIGASE ACTIVITY OF ARK2C. JRNL REF NAT COMMUN V. 13 1181 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35246518 JRNL DOI 10.1038/S41467-022-28782-Y REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1033 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.5900 - 4.7784 1.00 2959 151 0.1871 0.2352 REMARK 3 2 4.7784 - 3.7934 1.00 2816 132 0.1626 0.1904 REMARK 3 3 3.7934 - 3.3141 1.00 2739 165 0.1945 0.2274 REMARK 3 4 3.3141 - 3.0111 1.00 2731 133 0.2281 0.3098 REMARK 3 5 3.0111 - 2.7953 1.00 2735 141 0.2502 0.2826 REMARK 3 6 2.7953 - 2.6305 1.00 2706 149 0.2574 0.3093 REMARK 3 7 2.6305 - 2.4990 0.99 2641 162 0.3178 0.4079 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2439 REMARK 3 ANGLE : 0.883 3269 REMARK 3 CHIRALITY : 0.053 376 REMARK 3 PLANARITY : 0.005 413 REMARK 3 DIHEDRAL : 3.904 1525 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 48.4458 -50.0447 -0.7390 REMARK 3 T TENSOR REMARK 3 T11: 0.4889 T22: 0.6404 REMARK 3 T33: 0.4643 T12: -0.2566 REMARK 3 T13: 0.0507 T23: 0.0615 REMARK 3 L TENSOR REMARK 3 L11: 0.2966 L22: 1.4095 REMARK 3 L33: 1.4097 L12: -0.1358 REMARK 3 L13: 0.0491 L23: 0.7726 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: 0.1351 S13: 0.1311 REMARK 3 S21: -0.2744 S22: 0.0355 S23: -0.1120 REMARK 3 S31: -0.4759 S32: 0.3809 S33: -0.0359 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7R70 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20190315 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20455 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 44.592 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 42.80 REMARK 200 R MERGE (I) : 0.19300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 41.80 REMARK 200 R MERGE FOR SHELL (I) : 3.19000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 5D0K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M TRI-SODIUM CITRATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.47067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.23533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.47067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.23533 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.47067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 27.23533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 54.47067 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.23533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 GLY A 75 REMARK 465 GLY A 76 REMARK 465 GLY A 77 REMARK 465 GLU A 78 REMARK 465 SER A 79 REMARK 465 GLY A 80 REMARK 465 SER A 81 REMARK 465 GLY A 82 REMARK 465 GLY A 83 REMARK 465 SER A 84 REMARK 465 GLY A 85 REMARK 465 PRO A 275 REMARK 465 GLN A 276 REMARK 465 ASP A 277 REMARK 465 GLY A 278 REMARK 465 LYS A 279 REMARK 465 GLY A 280 REMARK 465 LYS A 281 REMARK 465 LYS A 282 REMARK 465 ASP A 283 REMARK 465 GLU A 284 REMARK 465 GLY A 285 REMARK 465 GLU A 286 REMARK 465 GLU A 287 REMARK 465 SER A 288 REMARK 465 GLY A 343 REMARK 465 ALA A 344 REMARK 465 ASP A 345 REMARK 465 SER A 346 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 ARG B 74 REMARK 465 GLY B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 GLU B 78 REMARK 465 SER B 79 REMARK 465 GLY B 80 REMARK 465 SER B 81 REMARK 465 GLY B 82 REMARK 465 GLY B 83 REMARK 465 SER B 84 REMARK 465 GLY B 85 REMARK 465 SER B 86 REMARK 465 GLY B 255 REMARK 465 ALA B 256 REMARK 465 VAL B 257 REMARK 465 GLN B 258 REMARK 465 ASN B 259 REMARK 465 GLN B 276 REMARK 465 ASP B 277 REMARK 465 GLY B 278 REMARK 465 LYS B 279 REMARK 465 GLY B 280 REMARK 465 LYS B 281 REMARK 465 LYS B 282 REMARK 465 ASP B 283 REMARK 465 GLU B 284 REMARK 465 GLY B 285 REMARK 465 GLU B 286 REMARK 465 GLU B 287 REMARK 465 SER B 288 REMARK 465 ALA B 344 REMARK 465 ASP B 345 REMARK 465 SER B 346 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 0 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 60 54.64 73.98 REMARK 500 MET A 313 1.77 84.52 REMARK 500 LYS A 329 21.03 -75.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 294 SG REMARK 620 2 CYS A 297 SG 110.1 REMARK 620 3 HIS A 317 ND1 101.3 96.8 REMARK 620 4 CYS A 320 SG 116.4 111.4 118.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 312 SG REMARK 620 2 HIS A 314 ND1 100.1 REMARK 620 3 CYS A 331 SG 109.2 115.6 REMARK 620 4 CYS A 334 SG 106.2 113.7 110.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 294 SG REMARK 620 2 CYS B 297 SG 112.1 REMARK 620 3 HIS B 317 ND1 110.8 95.9 REMARK 620 4 CYS B 320 SG 115.0 110.1 111.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 312 SG REMARK 620 2 HIS B 314 ND1 101.3 REMARK 620 3 CYS B 331 SG 110.6 104.4 REMARK 620 4 CYS B 334 SG 103.1 121.2 115.3 REMARK 620 N 1 2 3 DBREF 7R70 A 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF 7R70 A 255 346 UNP Q6ZSG1 RN165_HUMAN 255 346 DBREF 7R70 B 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF 7R70 B 255 346 UNP Q6ZSG1 RN165_HUMAN 255 346 SEQADV 7R70 GLY A -4 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 PRO A -3 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 LEU A -2 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 GLY A -1 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 SER A 0 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 GLY A 77 UNP P0CG48 LINKER SEQADV 7R70 GLU A 78 UNP P0CG48 LINKER SEQADV 7R70 SER A 79 UNP P0CG48 LINKER SEQADV 7R70 GLY A 80 UNP P0CG48 LINKER SEQADV 7R70 SER A 81 UNP P0CG48 LINKER SEQADV 7R70 GLY A 82 UNP P0CG48 LINKER SEQADV 7R70 GLY A 83 UNP P0CG48 LINKER SEQADV 7R70 SER A 84 UNP P0CG48 LINKER SEQADV 7R70 GLY A 85 UNP P0CG48 LINKER SEQADV 7R70 SER A 86 UNP P0CG48 LINKER SEQADV 7R70 GLY B -4 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 PRO B -3 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 LEU B -2 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 GLY B -1 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 SER B 0 UNP P0CG48 EXPRESSION TAG SEQADV 7R70 GLY B 77 UNP P0CG48 LINKER SEQADV 7R70 GLU B 78 UNP P0CG48 LINKER SEQADV 7R70 SER B 79 UNP P0CG48 LINKER SEQADV 7R70 GLY B 80 UNP P0CG48 LINKER SEQADV 7R70 SER B 81 UNP P0CG48 LINKER SEQADV 7R70 GLY B 82 UNP P0CG48 LINKER SEQADV 7R70 GLY B 83 UNP P0CG48 LINKER SEQADV 7R70 SER B 84 UNP P0CG48 LINKER SEQADV 7R70 GLY B 85 UNP P0CG48 LINKER SEQADV 7R70 SER B 86 UNP P0CG48 LINKER SEQRES 1 A 183 GLY PRO LEU GLY SER MET GLN ILE PHE VAL LYS THR LEU SEQRES 2 A 183 THR GLY LYS THR ILE THR LEU GLU VAL GLU PRO SER ASP SEQRES 3 A 183 THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP LYS GLU SEQRES 4 A 183 GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE PHE ALA GLY SEQRES 5 A 183 LYS GLN LEU GLU ASP GLY ARG THR LEU SER ASP TYR ASN SEQRES 6 A 183 ILE GLN LYS GLU SER THR LEU HIS LEU VAL LEU ARG LEU SEQRES 7 A 183 ARG GLY GLY GLY GLU SER GLY SER GLY GLY SER GLY SER SEQRES 8 A 183 GLY ALA VAL GLN ASN THR ILE GLU ARG PHE THR PHE PRO SEQRES 9 A 183 HIS LYS TYR LYS LYS ARG ARG PRO GLN ASP GLY LYS GLY SEQRES 10 A 183 LYS LYS ASP GLU GLY GLU GLU SER ASP THR ASP GLU LYS SEQRES 11 A 183 CYS THR ILE CYS LEU SER MET LEU GLU ASP GLY GLU ASP SEQRES 12 A 183 VAL ARG ARG LEU PRO CYS MET HIS LEU PHE HIS GLN LEU SEQRES 13 A 183 CYS VAL ASP GLN TRP LEU ALA MET SER LYS LYS CYS PRO SEQRES 14 A 183 ILE CYS ARG VAL ASP ILE GLU THR GLN LEU GLY ALA ASP SEQRES 15 A 183 SER SEQRES 1 B 183 GLY PRO LEU GLY SER MET GLN ILE PHE VAL LYS THR LEU SEQRES 2 B 183 THR GLY LYS THR ILE THR LEU GLU VAL GLU PRO SER ASP SEQRES 3 B 183 THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP LYS GLU SEQRES 4 B 183 GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE PHE ALA GLY SEQRES 5 B 183 LYS GLN LEU GLU ASP GLY ARG THR LEU SER ASP TYR ASN SEQRES 6 B 183 ILE GLN LYS GLU SER THR LEU HIS LEU VAL LEU ARG LEU SEQRES 7 B 183 ARG GLY GLY GLY GLU SER GLY SER GLY GLY SER GLY SER SEQRES 8 B 183 GLY ALA VAL GLN ASN THR ILE GLU ARG PHE THR PHE PRO SEQRES 9 B 183 HIS LYS TYR LYS LYS ARG ARG PRO GLN ASP GLY LYS GLY SEQRES 10 B 183 LYS LYS ASP GLU GLY GLU GLU SER ASP THR ASP GLU LYS SEQRES 11 B 183 CYS THR ILE CYS LEU SER MET LEU GLU ASP GLY GLU ASP SEQRES 12 B 183 VAL ARG ARG LEU PRO CYS MET HIS LEU PHE HIS GLN LEU SEQRES 13 B 183 CYS VAL ASP GLN TRP LEU ALA MET SER LYS LYS CYS PRO SEQRES 14 B 183 ILE CYS ARG VAL ASP ILE GLU THR GLN LEU GLY ALA ASP SEQRES 15 B 183 SER HET GOL A 401 6 HET GOL A 402 6 HET ZN A 403 1 HET ZN A 404 1 HET GOL B 401 6 HET GOL B 402 6 HET ZN B 403 1 HET ZN B 404 1 HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 5 ZN 4(ZN 2+) FORMUL 11 HOH *22(H2 O) HELIX 1 AA1 THR A 22 GLY A 35 1 14 HELIX 2 AA2 PRO A 37 ASP A 39 5 3 HELIX 3 AA3 THR A 55 TYR A 59 5 5 HELIX 4 AA4 VAL A 257 THR A 265 1 9 HELIX 5 AA5 GLN A 318 SER A 328 1 11 HELIX 6 AA6 THR B 22 GLY B 35 1 14 HELIX 7 AA7 PRO B 37 ASP B 39 5 3 HELIX 8 AA8 LEU B 56 ASN B 60 5 5 HELIX 9 AA9 ILE B 261 THR B 265 1 5 HELIX 10 AB1 GLN B 318 LYS B 329 1 12 SHEET 1 AA1 5 THR A 12 VAL A 17 0 SHEET 2 AA1 5 MET A 1 LYS A 6 -1 N MET A 1 O VAL A 17 SHEET 3 AA1 5 THR A 66 LEU A 71 1 O LEU A 67 N PHE A 4 SHEET 4 AA1 5 GLN A 41 PHE A 45 -1 N ILE A 44 O HIS A 68 SHEET 5 AA1 5 LYS A 48 GLN A 49 -1 O LYS A 48 N PHE A 45 SHEET 1 AA2 3 PHE A 266 LYS A 269 0 SHEET 2 AA2 3 ASP A 306 ARG A 309 -1 O VAL A 307 N HIS A 268 SHEET 3 AA2 3 LEU A 315 HIS A 317 -1 O PHE A 316 N ARG A 308 SHEET 1 AA3 5 THR B 12 VAL B 17 0 SHEET 2 AA3 5 MET B 1 LYS B 6 -1 N VAL B 5 O ILE B 13 SHEET 3 AA3 5 THR B 66 LEU B 71 1 O LEU B 67 N PHE B 4 SHEET 4 AA3 5 GLN B 41 PHE B 45 -1 N ILE B 44 O HIS B 68 SHEET 5 AA3 5 LYS B 48 GLN B 49 -1 O LYS B 48 N PHE B 45 SHEET 1 AA4 3 PHE B 266 LYS B 269 0 SHEET 2 AA4 3 ASP B 306 ARG B 309 -1 O VAL B 307 N HIS B 268 SHEET 3 AA4 3 LEU B 315 HIS B 317 -1 O PHE B 316 N ARG B 308 LINK SG CYS A 294 ZN ZN A 404 1555 1555 2.36 LINK SG CYS A 297 ZN ZN A 404 1555 1555 2.30 LINK SG CYS A 312 ZN ZN A 403 1555 1555 2.30 LINK ND1 HIS A 314 ZN ZN A 403 1555 1555 1.99 LINK ND1 HIS A 317 ZN ZN A 404 1555 1555 2.22 LINK SG CYS A 320 ZN ZN A 404 1555 1555 2.21 LINK SG CYS A 331 ZN ZN A 403 1555 1555 2.31 LINK SG CYS A 334 ZN ZN A 403 1555 1555 2.28 LINK SG CYS B 294 ZN ZN B 404 1555 1555 2.31 LINK SG CYS B 297 ZN ZN B 404 1555 1555 2.37 LINK SG CYS B 312 ZN ZN B 403 1555 1555 2.41 LINK ND1 HIS B 314 ZN ZN B 403 1555 1555 2.08 LINK ND1 HIS B 317 ZN ZN B 404 1555 1555 2.29 LINK SG CYS B 320 ZN ZN B 404 1555 1555 2.37 LINK SG CYS B 331 ZN ZN B 403 1555 1555 2.38 LINK SG CYS B 334 ZN ZN B 403 1555 1555 2.31 CRYST1 154.470 154.470 81.706 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006474 0.003738 0.000000 0.00000 SCALE2 0.000000 0.007475 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012239 0.00000