data_02Q
#
_chem_comp.id 02Q
_chem_comp.name "3-(2-methylphenyl)propanoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H12 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-06-24
_chem_comp.pdbx_modified_date 2012-01-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 164.201
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 02Q
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3OEU
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
02Q C28 C28 C 0 1 N N N N N N 11.642 -136.885 21.351 2.917 -0.139 0.124 C28 02Q 1
02Q C38 C38 C 0 1 N N N N N N 15.895 -134.379 23.140 -0.812 2.247 -0.177 C38 02Q 2
02Q C33 C33 C 0 1 Y N N N N N 15.085 -134.866 24.360 -1.533 0.928 -0.069 C33 02Q 3
02Q C34 C34 C 0 1 Y N N N N N 15.428 -134.414 25.633 -2.867 0.897 0.291 C34 02Q 4
02Q C35 C35 C 0 1 Y N N N N N 14.707 -134.844 26.749 -3.528 -0.313 0.390 C35 02Q 5
02Q C37 C37 C 0 1 Y N N N N N 13.641 -135.728 26.605 -2.855 -1.492 0.129 C37 02Q 6
02Q C36 C36 C 0 1 Y N N N N N 13.295 -136.182 25.335 -1.521 -1.461 -0.231 C36 02Q 7
02Q C32 C32 C 0 1 Y N N N N N 14.008 -135.754 24.204 -0.861 -0.250 -0.335 C32 02Q 8
02Q C31 C31 C 0 1 N N N N N N 13.566 -136.308 22.843 0.592 -0.215 -0.734 C31 02Q 9
02Q C9 C9 C 0 1 N N N N N N 12.065 -136.163 22.624 1.464 -0.174 0.523 C9 02Q 10
02Q O29 O29 O 0 1 N N N N N N 12.227 -137.897 20.961 3.224 -0.142 -1.045 O29 02Q 11
02Q H38 H38 H 0 1 N N N N N N 15.440 -133.461 22.740 -0.370 2.500 0.787 H38 02Q 12
02Q H38A H38A H 0 0 N N N N N N 16.931 -134.172 23.447 -0.026 2.172 -0.928 H38A 02Q 13
02Q H38B H38B H 0 0 N N N N N N 15.891 -135.158 22.363 -1.519 3.025 -0.467 H38B 02Q 14
02Q H34 H34 H 0 1 N N N N N N 16.254 -133.729 25.757 -3.393 1.818 0.495 H34 02Q 15
02Q H35 H35 H 0 1 N N N N N N 14.978 -134.488 27.732 -4.570 -0.338 0.672 H35 02Q 16
02Q H37 H37 H 0 1 N N N N N N 13.087 -136.059 27.471 -3.371 -2.438 0.207 H37 02Q 17
02Q H36 H36 H 0 1 N N N N N N 12.470 -136.870 25.219 -0.994 -2.382 -0.434 H36 02Q 18
02Q H31 H31 H 0 1 N N N N N N 14.091 -135.753 22.051 0.831 -1.107 -1.313 H31 02Q 19
02Q H31A H31A H 0 0 N N N N N N 13.825 -137.376 22.798 0.782 0.672 -1.338 H31A 02Q 20
02Q H9 H9 H 0 1 N N N N N N 11.815 -135.096 22.534 1.274 -1.061 1.127 H9 02Q 21
02Q H9A H9A H 0 1 N N N N N N 11.531 -136.599 23.481 1.225 0.718 1.102 H9A 02Q 22
02Q OXT OXT O 0 1 N Y N N N N ? ? ? 3.871 -0.099 1.068 OXT 02Q 23
02Q HXT HXT H 0 1 N Y N N N N ? ? ? 4.789 -0.078 0.764 HXT 02Q 24
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
02Q O29 C28 DOUB N N 1
02Q C28 C9 SING N N 2
02Q C38 C33 SING N N 3
02Q C38 H38 SING N N 4
02Q C38 H38A SING N N 5
02Q C38 H38B SING N N 6
02Q C32 C33 DOUB Y N 7
02Q C33 C34 SING Y N 8
02Q C34 C35 DOUB Y N 9
02Q C34 H34 SING N N 10
02Q C37 C35 SING Y N 11
02Q C35 H35 SING N N 12
02Q C36 C37 DOUB Y N 13
02Q C37 H37 SING N N 14
02Q C32 C36 SING Y N 15
02Q C36 H36 SING N N 16
02Q C31 C32 SING N N 17
02Q C9 C31 SING N N 18
02Q C31 H31 SING N N 19
02Q C31 H31A SING N N 20
02Q C9 H9 SING N N 21
02Q C9 H9A SING N N 22
02Q C28 OXT SING N N 23
02Q OXT HXT SING N N 24
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
02Q SMILES ACDLabs 12.01 O=C(O)CCc1ccccc1C
02Q InChI InChI 1.03 InChI=1S/C10H12O2/c1-8-4-2-3-5-9(8)6-7-10(11)12/h2-5H,6-7H2,1H3,(H,11,12)
02Q InChIKey InChI 1.03 JIRKNEAMPYVPTD-UHFFFAOYSA-N
02Q SMILES_CANONICAL CACTVS 3.370 Cc1ccccc1CCC(O)=O
02Q SMILES CACTVS 3.370 Cc1ccccc1CCC(O)=O
02Q SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 Cc1ccccc1CCC(=O)O
02Q SMILES "OpenEye OEToolkits" 1.7.2 Cc1ccccc1CCC(=O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
02Q "SYSTEMATIC NAME" ACDLabs 12.01 "3-(2-methylphenyl)propanoic acid"
02Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "3-(2-methylphenyl)propanoic acid"
#
_pdbx_chem_comp_audit.comp_id 02Q
_pdbx_chem_comp_audit.action_type 'Create component'
_pdbx_chem_comp_audit.date 2011-06-24
_pdbx_chem_comp_audit.processing_site RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
02Q C28 C 6.897 2.535 1
02Q C38 C 3.000 -1.215 2
02Q C33 C 4.299 -1.965 3
02Q C34 C 4.299 -3.465 4
02Q C35 C 5.598 -4.215 5
02Q C37 C 6.897 -3.465 6
02Q C36 C 6.897 -1.965 7
02Q C32 C 5.598 -1.215 8
02Q C31 C 5.598 0.285 9
02Q C9 C 6.897 1.035 10
02Q O29 O 8.196 3.285 11
02Q OXT O 5.598 3.285 12
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
02Q O29 C28 DOUBLE NONE 1
02Q C28 C9 SINGLE NONE 2
02Q C38 C33 SINGLE NONE 3
02Q C32 C33 DOUBLE NONE 4
02Q C33 C34 SINGLE NONE 5
02Q C34 C35 DOUBLE NONE 6
02Q C37 C35 SINGLE NONE 7
02Q C36 C37 DOUBLE NONE 8
02Q C32 C36 SINGLE NONE 9
02Q C31 C32 SINGLE NONE 10
02Q C9 C31 SINGLE NONE 11
02Q C28 OXT SINGLE NONE 12
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
02Q MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
02Q phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
02Q C33 S1 1
02Q C34 S1 1
02Q C35 S1 1
02Q C37 S1 1
02Q C36 S1 1
02Q C32 S1 1
02Q C33 F1 1
02Q C32 F1 1
02Q C36 F1 1
02Q C37 F1 1
02Q C35 F1 1
02Q C34 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 02Q
_pdbe_chem_comp_rdkit_properties.exactmw 164.084
_pdbe_chem_comp_rdkit_properties.amw 164.204
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 24
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.300
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 88.793
_pdbe_chem_comp_rdkit_properties.tpsa 37.300
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.903
_pdbe_chem_comp_rdkit_properties.CrippenMR 46.604
_pdbe_chem_comp_rdkit_properties.chi0v 5.816
_pdbe_chem_comp_rdkit_properties.chi1v 2.908
_pdbe_chem_comp_rdkit_properties.chi2v 0.977
_pdbe_chem_comp_rdkit_properties.chi3v 0.977
_pdbe_chem_comp_rdkit_properties.chi4v 0.520
_pdbe_chem_comp_rdkit_properties.chi0n 17.816
_pdbe_chem_comp_rdkit_properties.chi1n 8.816
_pdbe_chem_comp_rdkit_properties.chi2n 0.977
_pdbe_chem_comp_rdkit_properties.chi3n 0.977
_pdbe_chem_comp_rdkit_properties.chi4n 0.520
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.310
_pdbe_chem_comp_rdkit_properties.kappa1 1.950
_pdbe_chem_comp_rdkit_properties.kappa2 3.904
_pdbe_chem_comp_rdkit_properties.kappa3 2.381
_pdbe_chem_comp_rdkit_properties.Phi 0.634
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
02Q UniChem ChEMBL CHEMBL2252086
02Q UniChem PDBe 02Q
02Q UniChem ZINC ZINC000000396095
02Q UniChem eMolecules 507679
02Q UniChem SureChEMBL SCHEMBL323867
02Q UniChem 'PubChem TPHARMA' 57583455
02Q UniChem Mcule MCULE-1863841147
02Q UniChem ACTor 22084-89-5
02Q UniChem Nikkaji J1.248.850E
02Q UniChem 'EPA CompTox Dashboard' DTXSID90176586
02Q UniChem ChemicalBook CB7280748
02Q UniChem PubChem 30938
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
02Q C28 3.259 -0.460 -0.451 ETKDGv3 1
02Q C38 -1.178 -1.735 -1.351 ETKDGv3 2
02Q C33 -1.413 -0.503 -0.518 ETKDGv3 3
02Q C34 -2.755 -0.307 0.089 ETKDGv3 4
02Q C35 -3.016 0.773 0.832 ETKDGv3 5
02Q C37 -1.970 1.786 1.056 ETKDGv3 6
02Q C36 -0.761 1.631 0.508 ETKDGv3 7
02Q C32 -0.455 0.445 -0.334 ETKDGv3 8
02Q C31 0.942 0.324 -0.899 ETKDGv3 9
02Q C9 1.881 -0.335 0.115 ETKDGv3 10
02Q O29 3.587 -1.493 -1.094 ETKDGv3 11
02Q H38 -0.261 -2.263 -1.017 ETKDGv3 12
02Q H38A -2.025 -2.447 -1.261 ETKDGv3 13
02Q H38B -1.076 -1.452 -2.420 ETKDGv3 14
02Q H34 -3.535 -1.042 -0.066 ETKDGv3 15
02Q H35 -3.996 0.906 1.272 ETKDGv3 16
02Q H37 -2.184 2.654 1.666 ETKDGv3 17
02Q H36 0.000 2.382 0.683 ETKDGv3 18
02Q H31 1.325 1.339 -1.145 ETKDGv3 19
02Q H31A 0.944 -0.248 -1.852 ETKDGv3 20
02Q H9 1.502 -1.344 0.390 ETKDGv3 21
02Q H9A 1.924 0.279 1.041 ETKDGv3 22
02Q OXT 4.165 0.586 -0.305 ETKDGv3 23
02Q HXT 5.097 0.524 -0.697 ETKDGv3 24
#