data_0BE # _chem_comp.id 0BE _chem_comp.name BERYLLIUM _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAI _chem_comp.formula Be _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2014-03-28 _chem_comp.pdbx_modified_date 2014-07-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 9.012 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0BE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4P4K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # _chem_comp_atom.comp_id 0BE _chem_comp_atom.atom_id BE _chem_comp_atom.alt_atom_id BE _chem_comp_atom.type_symbol BE _chem_comp_atom.charge 2 _chem_comp_atom.pdbx_align 0 _chem_comp_atom.pdbx_aromatic_flag N _chem_comp_atom.pdbx_leaving_atom_flag N _chem_comp_atom.pdbx_stereo_config N _chem_comp_atom.pdbx_backbone_atom_flag N _chem_comp_atom.pdbx_n_terminal_atom_flag N _chem_comp_atom.pdbx_c_terminal_atom_flag N _chem_comp_atom.model_Cartn_x 0.000 _chem_comp_atom.model_Cartn_y 0.000 _chem_comp_atom.model_Cartn_z 0.000 _chem_comp_atom.pdbx_model_Cartn_x_ideal 0.000 _chem_comp_atom.pdbx_model_Cartn_y_ideal 0.000 _chem_comp_atom.pdbx_model_Cartn_z_ideal 0.000 _chem_comp_atom.pdbx_component_atom_id BE _chem_comp_atom.pdbx_component_comp_id 0BE _chem_comp_atom.pdbx_ordinal 1 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0BE SMILES ACDLabs 12.01 "[Be+2]" 0BE InChI InChI 1.03 InChI=1S/Be/q+2 0BE InChIKey InChI 1.03 PWOSZCQLSAMRQW-UHFFFAOYSA-N 0BE SMILES_CANONICAL CACTVS 3.385 "[Be++]" 0BE SMILES CACTVS 3.385 "[Be++]" 0BE SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[Be+2]" 0BE SMILES "OpenEye OEToolkits" 1.7.6 "[Be+2]" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0BE "SYSTEMATIC NAME" ACDLabs 12.01 beryllium 0BE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 beryllium(2+) # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0BE 'Create component' 2014-03-28 RCSB 0BE 'Initial release' 2014-07-16 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # _pdbe_chem_comp_atom_depiction.comp_id 0BE _pdbe_chem_comp_atom_depiction.atom_id BE _pdbe_chem_comp_atom_depiction.element Be _pdbe_chem_comp_atom_depiction.model_Cartn_x 3.000 _pdbe_chem_comp_atom_depiction.model_Cartn_y 0.000 _pdbe_chem_comp_atom_depiction.pdbx_ordinal 1 # # # # _pdbe_chem_comp_rdkit_properties.comp_id 0BE _pdbe_chem_comp_rdkit_properties.exactmw 9.011 _pdbe_chem_comp_rdkit_properties.amw 9.012 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 0 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 0 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 0 _pdbe_chem_comp_rdkit_properties.NumHBD 0 _pdbe_chem_comp_rdkit_properties.NumHBA 0 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 1 _pdbe_chem_comp_rdkit_properties.NumAtoms 1 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0 _pdbe_chem_comp_rdkit_properties.NumRings 0 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 11.333 _pdbe_chem_comp_rdkit_properties.tpsa 0 _pdbe_chem_comp_rdkit_properties.CrippenClogP -0.381 _pdbe_chem_comp_rdkit_properties.CrippenMR 5.754 _pdbe_chem_comp_rdkit_properties.chi0v 0.707 _pdbe_chem_comp_rdkit_properties.chi1v 0 _pdbe_chem_comp_rdkit_properties.chi2v 0 _pdbe_chem_comp_rdkit_properties.chi3v 0 _pdbe_chem_comp_rdkit_properties.chi4v 0 _pdbe_chem_comp_rdkit_properties.chi0n 0.707 _pdbe_chem_comp_rdkit_properties.chi1n 0 _pdbe_chem_comp_rdkit_properties.chi2n 0 _pdbe_chem_comp_rdkit_properties.chi3n 0 _pdbe_chem_comp_rdkit_properties.chi4n 0 _pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.169 _pdbe_chem_comp_rdkit_properties.kappa1 1.169 _pdbe_chem_comp_rdkit_properties.kappa2 4.092 _pdbe_chem_comp_rdkit_properties.kappa3 19.861 _pdbe_chem_comp_rdkit_properties.Phi 4.783 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id 0BE UniChem PDBe 0BE 0BE UniChem ChEBI 30502 0BE UniChem HMDB HMDB0002387 0BE UniChem 'PubChem TPHARMA' 15146223 0BE UniChem PubChem 107649 0BE UniChem ACTor 22537-20-8 0BE UniChem BRENDA 3450 0BE UniChem Mcule MCULE-9421366617 # _pdbe_chem_comp_rdkit_conformer.comp_id 0BE _pdbe_chem_comp_rdkit_conformer.atom_id BE _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit 0.000 _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit 0.000 _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit 0.000 _pdbe_chem_comp_rdkit_conformer.rdkit_method ETKDGv3 _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal 1 #